RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 LEPROTL1O95214 131 aa7.46□□□□□ -1.22
COPB1-202ENST00000439561 ERHP84090 104 aaKnown RBP7.46□□□□□ -1.22
COPB1-202ENST00000439561 VWC2Q2TAL6 325 aa7.46□□□□□ -1.22
COPB1-202ENST00000439561 OR1B1Q8NGR6 318 aa7.46□□□□□ -1.22
COPB1-202ENST00000439561 TMEM70Q9BUB7 260 aa7.46□□□□□ -1.22
COPB1-202ENST00000439561 OSTCQ9NRP0 149 aa7.46□□□□□ -1.22
COPB1-202ENST00000439561 INTS1Q8N201 2190 aaKnown RBP7.46□□□□□ -1.22
COPB1-202ENST00000439561 NBEAQ8NFP9 2946 aa7.46□□□□□ -1.22
COPB1-202ENST00000439561 YLPM1P49750 1951 aaKnown RBP7.46□□□□□ -1.22
COPB1-202ENST00000439561 IZUMO1RA6ND01 250 aa7.46□□□□□ -1.22
COPB1-202ENST00000439561 FAM181BA6NEQ2 426 aa7.46□□□□□ -1.22
COPB1-202ENST00000439561 SP1P08047 785 aa7.46□□□□□ -1.22
COPB1-202ENST00000439561 IGLL1P15814 213 aa7.46□□□□□ -1.22
COPB1-202ENST00000439561 IGHV1-2P23083 117 aa7.46□□□□□ -1.22
COPB1-202ENST00000439561 MRPL52Q86TS9 123 aaKnown RBP7.46□□□□□ -1.22
COPB1-202ENST00000439561 OR10W1Q8NGF6 305 aa7.46□□□□□ -1.22
COPB1-202ENST00000439561 C18orf32Q8TCD1 76 aa7.46□□□□□ -1.22
COPB1-202ENST00000439561 K7ESF4 209 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 M0R1B8 84 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 YPEL1O60688 119 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 NDUFB8O95169 186 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 REG1AP05451 166 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 ZNF138P52744 262 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 SAPCD1Q5SSQ6 148 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 CD177Q8N6Q3 437 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 ORAOV1Q8WV07 137 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 H1FXQ92522 213 aaKnown RBP7.45□□□□□ -1.22
COPB1-202ENST00000439561 FLYWCH2Q96CP2 140 aaKnown RBP7.45□□□□□ -1.22
COPB1-202ENST00000439561 YPEL2Q96QA6 119 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 CDX2Q99626 313 aaPredicted RBP7.45□□□□□ -1.22
COPB1-202ENST00000439561 TMEM191AQ9H0A3 160 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 ZNRD1Q9P1U0 126 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 SPTBN2O15020 2390 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 C15orf61A6NNL5 157 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 CORTO00230 105 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 HIST1H1EP10412 219 aaKnown RBP7.45□□□□□ -1.22
COPB1-202ENST00000439561 AREGP15514 252 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 VDAC2P45880 294 aaPredicted RBP7.45□□□□□ -1.22
COPB1-202ENST00000439561 CCL11P51671 97 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 SELENOVP59797 346 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 TBR1Q16650 682 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 C10orf113Q5VZT2 155 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 SMIM15Q7Z3B0 74 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 NIT1Q86X76 327 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 OR52E5Q8NH55 327 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 GAL3ST2Q9H3Q3 398 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 GSX1Q9H4S2 264 aaPredicted RBP7.45□□□□□ -1.22
COPB1-202ENST00000439561 PILRBQ9UKJ0 227 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 WDFY3Q8IZQ1 3526 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 SAA2-SAA4A0A096LPE2 208 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 PGPA6NDG6 321 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 NKX6-3A6NJ46 265 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 IQCF6A8MYZ5 107 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 ISLRO14498 428 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 MGST3O14880 152 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 SAA2P0DJI9 122 aaPredicted RBP7.45□□□□□ -1.22
COPB1-202ENST00000439561 PSG1P11464 419 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 HTR1DP28221 377 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 COMPP49747 757 aaPredicted RBP7.45□□□□□ -1.22
COPB1-202ENST00000439561 ZNF766Q5HY98 468 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 PMS2CLQ68D20 193 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 SLC25A34Q6PIV7 304 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 PDPNQ86YL7 162 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 NPIPB3Q92617 1050 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 HARBI1Q96MB7 349 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 NAA38Q9BRA0 125 aaKnown RBP7.45□□□□□ -1.22
COPB1-202ENST00000439561 JPT1Q9UK76 154 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 PRNDQ9UKY0 176 aa7.45□□□□□ -1.22
COPB1-202ENST00000439561 P01737 135 aa7.44□□□□□ -1.22
COPB1-202ENST00000439561 ZNF134P52741 427 aa7.44□□□□□ -1.22
COPB1-202ENST00000439561 BPIFB3P59826 476 aa7.44□□□□□ -1.22
COPB1-202ENST00000439561 AMMECR1LQ6DCA0 310 aa7.44□□□□□ -1.22
COPB1-202ENST00000439561 WDR31Q8NA23 367 aa7.44□□□□□ -1.22
COPB1-202ENST00000439561 Q8TCH9 128 aa7.44□□□□□ -1.22
COPB1-202ENST00000439561 SNRNP40Q96DI7 357 aaKnown RBP7.44□□□□□ -1.22
COPB1-202ENST00000439561 HES4Q9HCC6 221 aa7.44□□□□□ -1.22
COPB1-202ENST00000439561 KMT2EQ8IZD2 1858 aa7.44□□□□□ -1.22
COPB1-202ENST00000439561 COL5A1P20908 1838 aaPredicted RBP7.44□□□□□ -1.22
COPB1-202ENST00000439561 SERTM2A0A1B0GWG4 89 aa7.44□□□□□ -1.22
COPB1-202ENST00000439561 P0C879 139 aa7.44□□□□□ -1.22
COPB1-202ENST00000439561 KIR2DS2P43631 304 aa7.44□□□□□ -1.22
COPB1-202ENST00000439561 MZT1Q08AG7 82 aa7.44□□□□□ -1.22
COPB1-202ENST00000439561 NUP35Q8NFH5 326 aa7.44□□□□□ -1.22
COPB1-202ENST00000439561 NUDT10Q8NFP7 164 aa7.44□□□□□ -1.22
COPB1-202ENST00000439561 NUDT11Q96G61 164 aa7.44□□□□□ -1.22
COPB1-202ENST00000439561 ZC2HC1AQ96GY0 325 aa7.44□□□□□ -1.22
COPB1-202ENST00000439561 PLCE1Q9P212 2302 aa7.44□□□□□ -1.22
COPB1-202ENST00000439561 PCNX1Q96RV3 2341 aa7.44□□□□□ -1.22
COPB1-202ENST00000439561 OR2T8A6NH00 312 aa7.43□□□□□ -1.22
COPB1-202ENST00000439561 TNFSF15O95150 251 aa7.43□□□□□ -1.22
COPB1-202ENST00000439561 MOSP00540 346 aa7.43□□□□□ -1.22
COPB1-202ENST00000439561 CECR9P0C854 216 aa7.43□□□□□ -1.22
COPB1-202ENST00000439561 TMEM177Q53S58 311 aa7.43□□□□□ -1.22
COPB1-202ENST00000439561 EBLN2Q6P2I7 272 aa7.43□□□□□ -1.22
COPB1-202ENST00000439561 CCL13Q99616 98 aa7.43□□□□□ -1.22
COPB1-202ENST00000439561 MAP1LC3CQ9BXW4 147 aa7.43□□□□□ -1.22
COPB1-202ENST00000439561 FREM2Q5SZK8 3169 aa7.43□□□□□ -1.22
COPB1-202ENST00000439561 MUC21A0A0G2JKD1 596 aa7.43□□□□□ -1.22
COPB1-202ENST00000439561 MUC21A0A140T8X8 626 aa7.43□□□□□ -1.22
COPB1-202ENST00000439561 PEX7O00628 323 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms