RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 Q6ZT83 130 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 S1PR3Q99500 378 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 UQCR10Q9UDW1 63 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 ZFP30Q9Y2G7 519 aa8.22□□□□□ -1.09
CDC42SE1-202ENST00000439374 OOEPA6NGQ2 149 aa8.21□□□□□ -1.09
CDC42SE1-202ENST00000439374 NDUFB8O95169 186 aa8.21□□□□□ -1.09
CDC42SE1-202ENST00000439374 GNG5P63218 68 aa8.21□□□□□ -1.09
CDC42SE1-202ENST00000439374 WDR82Q6UXN9 313 aa8.21□□□□□ -1.09
CDC42SE1-202ENST00000439374 BHLHA15Q7RTS1 189 aaPredicted RBP8.21□□□□□ -1.09
CDC42SE1-202ENST00000439374 ZNF738Q8NE65 137 aa8.21□□□□□ -1.09
CDC42SE1-202ENST00000439374 COQ2Q96H96 371 aa8.21□□□□□ -1.09
CDC42SE1-202ENST00000439374 AGMATQ9BSE5 352 aa8.21□□□□□ -1.09
CDC42SE1-202ENST00000439374 CLEC7AQ9BXN2 247 aa8.21□□□□□ -1.09
CDC42SE1-202ENST00000439374 HILPDAQ9Y5L2 63 aa8.21□□□□□ -1.09
CDC42SE1-202ENST00000439374 CSMD1Q96PZ7 3565 aa8.21□□□□□ -1.1
CDC42SE1-202ENST00000439374 CORTO00230 105 aa8.21□□□□□ -1.1
CDC42SE1-202ENST00000439374 TMPRSS2O15393 492 aa8.21□□□□□ -1.1
CDC42SE1-202ENST00000439374 TNXAQ16473 311 aa8.21□□□□□ -1.1
CDC42SE1-202ENST00000439374 INO80CQ6PI98 192 aaPredicted RBP8.21□□□□□ -1.1
CDC42SE1-202ENST00000439374 LINC00173Q6ZV60 143 aa8.21□□□□□ -1.1
CDC42SE1-202ENST00000439374 CCL17Q92583 94 aa8.21□□□□□ -1.1
CDC42SE1-202ENST00000439374 IGLV2-14P01704 120 aa8.2□□□□□ -1.1
CDC42SE1-202ENST00000439374 APCSP02743 223 aa8.2□□□□□ -1.1
CDC42SE1-202ENST00000439374 GCHFRP30047 84 aa8.2□□□□□ -1.1
CDC42SE1-202ENST00000439374 ACP7Q6ZNF0 438 aa8.2□□□□□ -1.1
CDC42SE1-202ENST00000439374 A0A087X0K7 114 aa8.2□□□□□ -1.1
CDC42SE1-202ENST00000439374 A0A1W2PS18 150 aa8.2□□□□□ -1.1
CDC42SE1-202ENST00000439374 PDE6DO43924 150 aa8.2□□□□□ -1.1
CDC42SE1-202ENST00000439374 REG1AP05451 166 aa8.2□□□□□ -1.1
CDC42SE1-202ENST00000439374 GPX1P07203 203 aa8.2□□□□□ -1.1
CDC42SE1-202ENST00000439374 PYYP10082 97 aa8.2□□□□□ -1.1
CDC42SE1-202ENST00000439374 AMMECR1LQ6DCA0 310 aa8.2□□□□□ -1.1
CDC42SE1-202ENST00000439374 TMEM14EPQ6UXP3 125 aa8.2□□□□□ -1.1
CDC42SE1-202ENST00000439374 MOB1BQ7L9L4 216 aa8.2□□□□□ -1.1
CDC42SE1-202ENST00000439374 ZNF645Q8N7E2 425 aa8.2□□□□□ -1.1
CDC42SE1-202ENST00000439374 C5orf30Q96GV9 206 aa8.2□□□□□ -1.1
CDC42SE1-202ENST00000439374 RNF2Q99496 336 aa8.2□□□□□ -1.1
CDC42SE1-202ENST00000439374 SPRY4Q9C004 299 aa8.2□□□□□ -1.1
CDC42SE1-202ENST00000439374 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.2□□□□□ -1.14e-10■■□□□ 12
CDC42SE1-202ENST00000439374 PTPRQQ9UMZ3 2332 aa8.2□□□□□ -1.1
CDC42SE1-202ENST00000439374 AKAP13Q12802 2813 aa8.2□□□□□ -1.1
CDC42SE1-202ENST00000439374 BMPR1BO00238 502 aa8.2□□□□□ -1.1
CDC42SE1-202ENST00000439374 ZNF207O43670 478 aaKnown RBP8.2□□□□□ -1.1
CDC42SE1-202ENST00000439374 ENSAO43768 121 aaKnown RBP8.2□□□□□ -1.1
CDC42SE1-202ENST00000439374 SLAQ13239 276 aa8.2□□□□□ -1.1
CDC42SE1-202ENST00000439374 KRTAP27-1Q3LI81 207 aa8.2□□□□□ -1.1
CDC42SE1-202ENST00000439374 FBLN7Q53RD9 439 aa8.2□□□□□ -1.1
CDC42SE1-202ENST00000439374 IBA57Q5T440 356 aaKnown RBP8.2□□□□□ -1.1
CDC42SE1-202ENST00000439374 Q6ZSR3 168 aa8.2□□□□□ -1.1
CDC42SE1-202ENST00000439374 TCF24Q7RTU0 167 aa8.2□□□□□ -1.1
CDC42SE1-202ENST00000439374 CD177Q8N6Q3 437 aa8.2□□□□□ -1.1
CDC42SE1-202ENST00000439374 PPP1R35Q8TAP8 253 aa8.2□□□□□ -1.1
CDC42SE1-202ENST00000439374 TAAR6Q96RI8 345 aa8.2□□□□□ -1.1
CDC42SE1-202ENST00000439374 MGST2Q99735 147 aa8.2□□□□□ -1.1
CDC42SE1-202ENST00000439374 PYGO2Q9BRQ0 406 aa8.2□□□□□ -1.1
CDC42SE1-202ENST00000439374 IGHV2OR16-5A0A0B4J2B6 119 aa8.19□□□□□ -1.1
CDC42SE1-202ENST00000439374 NRN1LQ496H8 165 aa8.19□□□□□ -1.1
CDC42SE1-202ENST00000439374 PEAR1Q5VY43 1037 aaPredicted RBP8.19□□□□□ -1.1
CDC42SE1-202ENST00000439374 TREML4Q6UXN2 200 aa8.19□□□□□ -1.1
CDC42SE1-202ENST00000439374 OR4B1Q8NGF8 309 aa8.19□□□□□ -1.1
CDC42SE1-202ENST00000439374 IL36BQ9NZH7 164 aa8.19□□□□□ -1.1
CDC42SE1-202ENST00000439374 ANKHD1Q8IWZ3 2542 aaKnown RBP8.19□□□□□ -1.1
CDC42SE1-202ENST00000439374 TMSB15BA0A087X1C1 80 aa8.19□□□□□ -1.1
CDC42SE1-202ENST00000439374 C15orf62A8K5M9 175 aa8.19□□□□□ -1.1
CDC42SE1-202ENST00000439374 PPIAL4DF5H284 164 aa8.19□□□□□ -1.1
CDC42SE1-202ENST00000439374 CA2P00918 260 aa8.19□□□□□ -1.1
CDC42SE1-202ENST00000439374 LGALS4P56470 323 aa8.19□□□□□ -1.1
CDC42SE1-202ENST00000439374 C1orf174Q8IYL3 243 aa8.19□□□□□ -1.1
CDC42SE1-202ENST00000439374 FAM216BQ8N7L0 139 aa8.19□□□□□ -1.1
CDC42SE1-202ENST00000439374 TCTEX1D1Q8N7M0 179 aa8.19□□□□□ -1.1
CDC42SE1-202ENST00000439374 EAF1Q96JC9 268 aaPredicted RBP8.19□□□□□ -1.1
CDC42SE1-202ENST00000439374 SLC45A2Q9UMX9 530 aa8.19□□□□□ -1.1
CDC42SE1-202ENST00000439374 IGHV3-72A0A0B4J1Y9 119 aa8.19□□□□□ -1.1
CDC42SE1-202ENST00000439374 IGHV1-18A0A0C4DH31 117 aa8.19□□□□□ -1.1
CDC42SE1-202ENST00000439374 K7EM74 188 aa8.19□□□□□ -1.1
CDC42SE1-202ENST00000439374 IGLC2P0DOY2 106 aa8.19□□□□□ -1.1
CDC42SE1-202ENST00000439374 IGLC3P0DOY3 106 aa8.19□□□□□ -1.1
CDC42SE1-202ENST00000439374 ORM2P19652 201 aa8.19□□□□□ -1.1
CDC42SE1-202ENST00000439374 COMPP49747 757 aaPredicted RBP8.19□□□□□ -1.1
CDC42SE1-202ENST00000439374 KLF3P57682 345 aaPredicted RBP8.19□□□□□ -1.1
CDC42SE1-202ENST00000439374 UBE2L3P68036 154 aaKnown RBP8.19□□□□□ -1.1
CDC42SE1-202ENST00000439374 PAFAH1B2P68402 229 aa8.19□□□□□ -1.1
CDC42SE1-202ENST00000439374 LCN2P80188 198 aa8.19□□□□□ -1.1
CDC42SE1-202ENST00000439374 OR8B3Q8NGG8 313 aa8.19□□□□□ -1.1
CDC42SE1-202ENST00000439374 FLYWCH2Q96CP2 140 aaKnown RBP8.19□□□□□ -1.1
CDC42SE1-202ENST00000439374 LOC389332A0A1B0GUA5 103 aa8.18□□□□□ -1.1
CDC42SE1-202ENST00000439374 TSPOP30536 169 aa8.18□□□□□ -1.1
CDC42SE1-202ENST00000439374 DLX1P56177 255 aa8.18□□□□□ -1.1
CDC42SE1-202ENST00000439374 OR9G1Q8NH87 305 aa8.18□□□□□ -1.1
CDC42SE1-202ENST00000439374 AP1S3Q96PC3 154 aa8.18□□□□□ -1.1
CDC42SE1-202ENST00000439374 K7EMI3 77 aa8.18□□□□□ -1.1
CDC42SE1-202ENST00000439374 ZNF324O75467 553 aaPredicted RBP8.18□□□□□ -1.1
CDC42SE1-202ENST00000439374 ZNF883P0CG24 379 aa8.18□□□□□ -1.1
CDC42SE1-202ENST00000439374 CD99P14209 185 aa8.18□□□□□ -1.1
CDC42SE1-202ENST00000439374 TMEM11P17152 192 aa8.18□□□□□ -1.1
CDC42SE1-202ENST00000439374 TNFAIP6P98066 277 aaPredicted RBP8.18□□□□□ -1.1
CDC42SE1-202ENST00000439374 COA6Q5JTJ3 125 aaKnown RBP8.18□□□□□ -1.1
CDC42SE1-202ENST00000439374 WDR31Q8NA23 367 aa8.18□□□□□ -1.1
CDC42SE1-202ENST00000439374 LSM10Q969L4 123 aaKnown RBP8.18□□□□□ -1.1
CDC42SE1-202ENST00000439374 FNDC4Q9H6D8 234 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms