RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 C1orf159Q96HA4 380 aa13.66□□□□□ -0.22
TTC3-209ENST00000438055 TBX15Q96SF7 602 aa13.66□□□□□ -0.22
TTC3-209ENST00000438055 PPIAL4AQ9Y536 164 aa13.66□□□□□ -0.22
TTC3-209ENST00000438055 MALRD1Q5VYJ5 2156 aa13.66□□□□□ -0.22
TTC3-209ENST00000438055 MKRN2OSH3BPM6 223 aa13.66□□□□□ -0.22
TTC3-209ENST00000438055 RPL15P61313 204 aaKnown RBP13.66□□□□□ -0.22
TTC3-209ENST00000438055 CR1LQ2VPA4 569 aa13.66□□□□□ -0.22
TTC3-209ENST00000438055 NPIPB3Q92617 1050 aa13.66□□□□□ -0.22
TTC3-209ENST00000438055 SGK494Q96LW2 274 aa13.66□□□□□ -0.22
TTC3-209ENST00000438055 SSUH2Q9Y2M2 353 aa13.66□□□□□ -0.22
TTC3-209ENST00000438055 LAMA5O15230 3695 aa13.65□□□□□ -0.22
TTC3-209ENST00000438055 SLC25A17O43808 307 aa13.65□□□□□ -0.22
TTC3-209ENST00000438055 FRMD6-AS1P0C7T7 363 aa13.65□□□□□ -0.22
TTC3-209ENST00000438055 TPPP2P59282 170 aa13.65□□□□□ -0.22
TTC3-209ENST00000438055 AARDQ4LEZ3 155 aa13.65□□□□□ -0.22
TTC3-209ENST00000438055 LRRC10Q5BKY1 277 aa13.65□□□□□ -0.22
TTC3-209ENST00000438055 COA6Q5JTJ3 125 aaKnown RBP13.65□□□□□ -0.22
TTC3-209ENST00000438055 HCP5Q6MZN7 132 aa13.65□□□□□ -0.22
TTC3-209ENST00000438055 GFRALQ6UXV0 394 aa13.65□□□□□ -0.22
TTC3-209ENST00000438055 Q6ZS92 163 aa13.65□□□□□ -0.22
TTC3-209ENST00000438055 LHFPL4Q7Z7J7 247 aa13.65□□□□□ -0.22
TTC3-209ENST00000438055 HSPB9Q9BQS6 159 aa13.65□□□□□ -0.22
TTC3-209ENST00000438055 CBLN4Q9NTU7 201 aa13.65□□□□□ -0.22
TTC3-209ENST00000438055 IGKV1OR2-108A0A075B7D4 117 aa13.65□□□□□ -0.22
TTC3-209ENST00000438055 ORM2P19652 201 aa13.65□□□□□ -0.22
TTC3-209ENST00000438055 KRTCAP3Q53RY4 240 aa13.65□□□□□ -0.22
TTC3-209ENST00000438055 RNASEH2CQ8TDP1 164 aaKnown RBP13.65□□□□□ -0.22
TTC3-209ENST00000438055 SSBP3Q9BWW4 388 aaPredicted RBP13.65□□□□□ -0.22
TTC3-209ENST00000438055 LINC00312Q9Y6C7 94 aa13.65□□□□□ -0.22
TTC3-209ENST00000438055 DMXL1Q9Y485 3027 aa13.65□□□□□ -0.22
TTC3-209ENST00000438055 C8orf88P0DMB2 117 aa13.65□□□□□ -0.22
TTC3-209ENST00000438055 GATA4P43694 442 aa13.65□□□□□ -0.22
TTC3-209ENST00000438055 DIAPH2-AS1Q14236 149 aa13.65□□□□□ -0.22
TTC3-209ENST00000438055 SSX2Q16385 188 aa13.65□□□□□ -0.22
TTC3-209ENST00000438055 OR5B3Q8NH48 314 aa13.65□□□□□ -0.22
TTC3-209ENST00000438055 BLNKQ8WV28 456 aa13.65□□□□□ -0.22
TTC3-209ENST00000438055 NEUROG1Q92886 237 aa13.65□□□□□ -0.22
TTC3-209ENST00000438055 MISP3Q96FF7 219 aa13.65□□□□□ -0.22
TTC3-209ENST00000438055 NAGKQ9UJ70 344 aa13.65□□□□□ -0.22
TTC3-209ENST00000438055 C17orf100A8MU93 164 aa13.64□□□□□ -0.23
TTC3-209ENST00000438055 SERF1AO75920 110 aa13.64□□□□□ -0.23
TTC3-209ENST00000438055 CA1P00915 261 aaPredicted RBP13.64□□□□□ -0.23
TTC3-209ENST00000438055 KRTDAPP60985 99 aa13.64□□□□□ -0.23
TTC3-209ENST00000438055 PRR20EP86478 221 aa13.64□□□□□ -0.23
TTC3-209ENST00000438055 PRR20CP86479 221 aa13.64□□□□□ -0.23
TTC3-209ENST00000438055 PRR20DP86480 221 aa13.64□□□□□ -0.23
TTC3-209ENST00000438055 PRR20BP86481 221 aa13.64□□□□□ -0.23
TTC3-209ENST00000438055 PRR20AP86496 221 aa13.64□□□□□ -0.23
TTC3-209ENST00000438055 ZNF600Q6ZNG1 722 aa13.64□□□□□ -0.23
TTC3-209ENST00000438055 TM4SF5O14894 197 aa13.64□□□□□ -0.23
TTC3-209ENST00000438055 TMEM249Q2WGJ8 235 aa13.64□□□□□ -0.23
TTC3-209ENST00000438055 FAM57AQ8TBR7 257 aa13.64□□□□□ -0.23
TTC3-209ENST00000438055 TRAV34A0A0B4J273 112 aa13.64□□□□□ -0.23
TTC3-209ENST00000438055 PYYP10082 97 aa13.64□□□□□ -0.23
TTC3-209ENST00000438055 PMCHP20382 165 aa13.64□□□□□ -0.23
TTC3-209ENST00000438055 BATFQ16520 125 aa13.64□□□□□ -0.23
TTC3-209ENST00000438055 TGIF2LXQ8IUE1 241 aa13.64□□□□□ -0.23
TTC3-209ENST00000438055 ITGB1BP1O14713 200 aa13.63□□□□□ -0.23
TTC3-209ENST00000438055 DYSFO75923 2080 aa13.63□□□□□ -0.23
TTC3-209ENST00000438055 SPTBN1Q01082 2364 aaKnown RBP13.63□□□□□ -0.23
TTC3-209ENST00000438055 CD69Q07108 199 aa13.63□□□□□ -0.23
TTC3-209ENST00000438055 ZNF439Q8NDP4 499 aa13.63□□□□□ -0.23
TTC3-209ENST00000438055 LINC00479Q96M42 142 aa13.63□□□□□ -0.23
TTC3-209ENST00000438055 NOL4LQ96MY1 436 aaPredicted RBP13.63□□□□□ -0.23
TTC3-209ENST00000438055 RNASE2P10153 161 aaKnown RBP13.63□□□□□ -0.23
TTC3-209ENST00000438055 IBA57Q5T440 356 aaKnown RBP13.63□□□□□ -0.23
TTC3-209ENST00000438055 ZNF257Q9Y2Q1 563 aa13.63□□□□□ -0.23
TTC3-209ENST00000438055 DPRXA6NFQ7 191 aa13.63□□□□□ -0.23
TTC3-209ENST00000438055 DLL1O00548 723 aa13.63□□□□□ -0.23
TTC3-209ENST00000438055 SUB1P53999 127 aaKnown RBP eCLIP13.63□□□□□ -0.23
TTC3-209ENST00000438055 DLX1P56177 255 aa13.63□□□□□ -0.23
TTC3-209ENST00000438055 TMEM200BQ69YZ2 307 aa13.63□□□□□ -0.23
TTC3-209ENST00000438055 SIGLECL1Q8N7X8 197 aa13.63□□□□□ -0.23
TTC3-209ENST00000438055 OSR1Q8TAX0 266 aaPredicted RBP13.63□□□□□ -0.23
TTC3-209ENST00000438055 VN1R17PQ8TDU5 208 aa13.63□□□□□ -0.23
TTC3-209ENST00000438055 DNAJC4Q9NNZ3 241 aa13.63□□□□□ -0.23
TTC3-209ENST00000438055 NTF3P20783 257 aa13.62□□□□□ -0.23
TTC3-209ENST00000438055 RANP62826 216 aaKnown RBP13.62□□□□□ -0.23
TTC3-209ENST00000438055 ADIPOQQ15848 244 aa13.62□□□□□ -0.23
TTC3-209ENST00000438055 C10orf113Q5VZT2 155 aa13.62□□□□□ -0.23
TTC3-209ENST00000438055 LYPD2Q6UXB3 125 aa13.62□□□□□ -0.23
TTC3-209ENST00000438055 FAM222BQ8WU58 562 aa13.62□□□□□ -0.23
TTC3-209ENST00000438055 PAM16Q9Y3D7 125 aa13.62□□□□□ -0.23
TTC3-209ENST00000438055 WNK2Q9Y3S1 2297 aa13.62□□□□□ -0.23
TTC3-209ENST00000438055 A8MWP6 167 aa13.62□□□□□ -0.23
TTC3-209ENST00000438055 GGTLC3B5MD39 225 aa13.62□□□□□ -0.23
TTC3-209ENST00000438055 MOSP00540 346 aa13.62□□□□□ -0.23
TTC3-209ENST00000438055 AREGP15514 252 aa13.62□□□□□ -0.23
TTC3-209ENST00000438055 OR4C13Q8NGP0 309 aa13.62□□□□□ -0.23
TTC3-209ENST00000438055 ZNF331Q9NQX6 463 aaPredicted RBP13.62□□□□□ -0.23
TTC3-209ENST00000438055 ZNF355PQ9NSJ1 428 aa13.62□□□□□ -0.23
TTC3-209ENST00000438055 A0A0G2JNJ9 132 aa13.61□□□□□ -0.23
TTC3-209ENST00000438055 H3BTX0 84 aa13.61□□□□□ -0.23
TTC3-209ENST00000438055 ZNF253O75346 499 aa13.61□□□□□ -0.23
TTC3-209ENST00000438055 OR1B1Q8NGR6 318 aa13.61□□□□□ -0.23
TTC3-209ENST00000438055 ABHD17AQ96GS6 310 aa13.61□□□□□ -0.23
TTC3-209ENST00000438055 PAXXQ9BUH6 204 aa13.61□□□□□ -0.23
TTC3-209ENST00000438055 Q9UFV3 132 aa13.61□□□□□ -0.23
TTC3-209ENST00000438055 AKAP6Q13023 2319 aa13.61□□□□□ -0.23
TTC3-209ENST00000438055 COL6A6A6NMZ7 2263 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms