RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 ZNF324BQ6AW86 544 aaPredicted RBP12.93□□□□□ -0.34
NEDD4-202ENST00000435532 SLC25A48Q6ZT89 311 aaKnown RBP12.93□□□□□ -0.34
NEDD4-202ENST00000435532 CD177Q8N6Q3 437 aa12.93□□□□□ -0.34
NEDD4-202ENST00000435532 ZNF319Q9P2F9 582 aa12.93□□□□□ -0.34
NEDD4-202ENST00000435532 SPTA1P02549 2419 aa12.93□□□□□ -0.34
NEDD4-202ENST00000435532 FOXL2NBQ6ZUU3 175 aa12.93□□□□□ -0.34
NEDD4-202ENST00000435532 ALKBH7Q9BT30 221 aaPredicted RBP12.93□□□□□ -0.34
NEDD4-202ENST00000435532 OTORQ9NRC9 128 aa12.93□□□□□ -0.34
NEDD4-202ENST00000435532 PHOX2AO14813 284 aa12.92□□□□□ -0.34
NEDD4-202ENST00000435532 FAM71F2Q6NXP2 309 aa12.92□□□□□ -0.34
NEDD4-202ENST00000435532 OR11H4Q8NGC9 324 aa12.92□□□□□ -0.34
NEDD4-202ENST00000435532 BUB1B-PAK6H3BSN5 160 aa12.92□□□□□ -0.34
NEDD4-202ENST00000435532 VAMP3Q15836 100 aa12.92□□□□□ -0.34
NEDD4-202ENST00000435532 ANGPTL6Q8NI99 470 aa12.92□□□□□ -0.34
NEDD4-202ENST00000435532 GEMIN7Q9H840 131 aaKnown RBP12.92□□□□□ -0.34
NEDD4-202ENST00000435532 KIAA1671Q9BY89 1806 aa12.92□□□□□ -0.34
NEDD4-202ENST00000435532 TRBV7-1A0A0A6YYK4 115 aa12.92□□□□□ -0.34
NEDD4-202ENST00000435532 FAM223BA6NKX1 122 aa12.92□□□□□ -0.34
NEDD4-202ENST00000435532 C1QL1O75973 258 aa12.92□□□□□ -0.34
NEDD4-202ENST00000435532 FAM223AQ8IWN6 122 aa12.92□□□□□ -0.34
NEDD4-202ENST00000435532 CXCL2P19875 107 aa12.92□□□□□ -0.34
NEDD4-202ENST00000435532 PRSS8Q16651 343 aa12.92□□□□□ -0.34
NEDD4-202ENST00000435532 OR10D4PQ8NGN7 298 aa12.92□□□□□ -0.34
NEDD4-202ENST00000435532 TRGV11A0A075B6L2 103 aa12.91□□□□□ -0.34
NEDD4-202ENST00000435532 OVOL1O14753 267 aa12.91□□□□□ -0.34
NEDD4-202ENST00000435532 PRSS2P07478 247 aa12.91□□□□□ -0.34
NEDD4-202ENST00000435532 ZNF502Q8TBZ5 544 aa12.91□□□□□ -0.34
NEDD4-202ENST00000435532 RTBDNQ9BSG5 229 aaPredicted RBP12.91□□□□□ -0.34
NEDD4-202ENST00000435532 PRTN3P24158 256 aa12.91□□□□□ -0.34
NEDD4-202ENST00000435532 ZNF362Q5T0B9 420 aaPredicted RBP12.91□□□□□ -0.34
NEDD4-202ENST00000435532 LAIR2Q6ISS4 152 aa12.91□□□□□ -0.34
NEDD4-202ENST00000435532 TMEM190Q8WZ59 177 aa12.91□□□□□ -0.34
NEDD4-202ENST00000435532 IGKV3OR2-268A0A0C4DH90 116 aa12.91□□□□□ -0.34
NEDD4-202ENST00000435532 CIRBPQ14011 172 aaKnown RBP12.91□□□□□ -0.34
NEDD4-202ENST00000435532 M0R143 59 aa12.91□□□□□ -0.34
NEDD4-202ENST00000435532 KLHL30-AS1Q8NEE0 82 aa12.91□□□□□ -0.34
NEDD4-202ENST00000435532 MLNRO43193 412 aa12.91□□□□□ -0.34
NEDD4-202ENST00000435532 EGR1P18146 543 aa12.91□□□□□ -0.34
NEDD4-202ENST00000435532 AGAP20933 346 aa12.91□□□□□ -0.34
NEDD4-202ENST00000435532 IGHV3OR16-8A0A075B7F1 116 aa12.9□□□□□ -0.34
NEDD4-202ENST00000435532 C2orf68Q2NKX9 166 aa12.9□□□□□ -0.34
NEDD4-202ENST00000435532 OR1P1Q8NH06 330 aa12.9□□□□□ -0.34
NEDD4-202ENST00000435532 MBNL3Q9NUK0 354 aaKnown RBP12.9□□□□□ -0.34
NEDD4-202ENST00000435532 C5orf52A6NGY3 159 aa12.9□□□□□ -0.34
NEDD4-202ENST00000435532 RPL29P47914 159 aaKnown RBP12.9□□□□□ -0.34
NEDD4-202ENST00000435532 EFNB3Q15768 340 aa12.9□□□□□ -0.34
NEDD4-202ENST00000435532 SIGLEC15Q6ZMC9 328 aa12.9□□□□□ -0.34
NEDD4-202ENST00000435532 PEX7O00628 323 aa12.9□□□□□ -0.34
NEDD4-202ENST00000435532 NEU1Q99519 415 aa12.9□□□□□ -0.34
NEDD4-202ENST00000435532 CIARTQ8N365 385 aaPredicted RBP12.9□□□□□ -0.35
NEDD4-202ENST00000435532 ASCL2Q99929 193 aa12.9□□□□□ -0.35
NEDD4-202ENST00000435532 UBE2E1P51965 193 aa12.89□□□□□ -0.35
NEDD4-202ENST00000435532 C5orf64Q2M2E5 130 aa12.89□□□□□ -0.35
NEDD4-202ENST00000435532 PIP4P2Q8N4L2 257 aa12.89□□□□□ -0.35
NEDD4-202ENST00000435532 Q9H3A6 140 aa12.89□□□□□ -0.35
NEDD4-202ENST00000435532 PNRC2Q9NPJ4 139 aaKnown RBP12.89□□□□□ -0.35
NEDD4-202ENST00000435532 DANCRP0C864 163 aa12.89□□□□□ -0.35
NEDD4-202ENST00000435532 LINC00527Q9UJ94 153 aa12.89□□□□□ -0.35
NEDD4-202ENST00000435532 HGFACQ04756 655 aa12.89□□□□□ -0.35
NEDD4-202ENST00000435532 C18orf12Q96KH6 178 aa12.89□□□□□ -0.35
NEDD4-202ENST00000435532 KLF2Q9Y5W3 355 aaPredicted RBP12.89□□□□□ -0.35
NEDD4-202ENST00000435532 TRBV20OR9-2A0A075B6H5 130 aa12.89□□□□□ -0.35
NEDD4-202ENST00000435532 J3QRE1 110 aa12.89□□□□□ -0.35
NEDD4-202ENST00000435532 TFF3Q07654 80 aa12.89□□□□□ -0.35
NEDD4-202ENST00000435532 ATG101Q9BSB4 218 aa12.89□□□□□ -0.35
NEDD4-202ENST00000435532 M0R381 172 aa12.88□□□□□ -0.35
NEDD4-202ENST00000435532 CR1LQ2VPA4 569 aa12.88□□□□□ -0.35
NEDD4-202ENST00000435532 TBX15Q96SF7 602 aa12.88□□□□□ -0.35
NEDD4-202ENST00000435532 IGKV1D-13A0A0B4J2D9 117 aa12.88□□□□□ -0.35
NEDD4-202ENST00000435532 IGKV1-13P0DP09 117 aa12.88□□□□□ -0.35
NEDD4-202ENST00000435532 SELLP14151 372 aa12.88□□□□□ -0.35
NEDD4-202ENST00000435532 SAA4P35542 130 aa12.88□□□□□ -0.35
NEDD4-202ENST00000435532 Q8TCH9 128 aa12.88□□□□□ -0.35
NEDD4-202ENST00000435532 TSC2P49815 1807 aa12.88□□□□□ -0.35
NEDD4-202ENST00000435532 ERVK11-1P61568 191 aa12.88□□□□□ -0.35
NEDD4-202ENST00000435532 MRPS16Q9Y3D3 137 aaKnown RBP12.88□□□□□ -0.35
NEDD4-202ENST00000435532 C15orf32Q32M92 178 aa12.88□□□□□ -0.35
NEDD4-202ENST00000435532 C2orf88Q9BSF0 95 aa12.88□□□□□ -0.35
NEDD4-202ENST00000435532 CD8AP01732 235 aa12.88□□□□□ -0.35
NEDD4-202ENST00000435532 CENPWQ5EE01 88 aa12.88□□□□□ -0.35
NEDD4-202ENST00000435532 Q6AWC8 147 aa12.88□□□□□ -0.35
NEDD4-202ENST00000435532 LCNL1Q6ZST4 164 aa12.88□□□□□ -0.35
NEDD4-202ENST00000435532 TRAV21A0A0B4J279 112 aa12.87□□□□□ -0.35
NEDD4-202ENST00000435532 LGALS3P17931 250 aaKnown RBP12.87□□□□□ -0.35
NEDD4-202ENST00000435532 MCRIP2Q9BUT9 160 aaKnown RBP12.87□□□□□ -0.35
NEDD4-202ENST00000435532 TRBV9A0A0B4J1U6 114 aa12.87□□□□□ -0.35
NEDD4-202ENST00000435532 IGHV1-69DA0A0B4J2H0 117 aa12.87□□□□□ -0.35
NEDD4-202ENST00000435532 IGKV1-12A0A0C4DH73 117 aa12.87□□□□□ -0.35
NEDD4-202ENST00000435532 E9PQ18 207 aa12.87□□□□□ -0.35
NEDD4-202ENST00000435532 TNFSF13O75888 250 aa12.87□□□□□ -0.35
NEDD4-202ENST00000435532 IGKV1D-12P01611 117 aa12.87□□□□□ -0.35
NEDD4-202ENST00000435532 IGHV1-69P01742 117 aa12.87□□□□□ -0.35
NEDD4-202ENST00000435532 SPTBP11277 2137 aa12.87□□□□□ -0.35
NEDD4-202ENST00000435532 OR5AN1Q8NGI8 311 aa12.87□□□□□ -0.35
NEDD4-202ENST00000435532 A0A1B0GW15 77 aa12.87□□□□□ -0.35
NEDD4-202ENST00000435532 TCF21O43680 179 aa12.87□□□□□ -0.35
NEDD4-202ENST00000435532 TMEM42Q69YG0 159 aa12.87□□□□□ -0.35
NEDD4-202ENST00000435532 PLXNA4Q9HCM2 1894 aa12.87□□□□□ -0.35
NEDD4-202ENST00000435532 LYPD2Q6UXB3 125 aa12.87□□□□□ -0.35
NEDD4-202ENST00000435532 ISOC2Q96AB3 205 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms