RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 DTD1Q8TEA8 209 aa11.09□□□□□ -0.63
CSTF3-202ENST00000431742 TMEM170AQ8WVE7 144 aa11.09□□□□□ -0.63
CSTF3-202ENST00000431742 CXorf58Q96LI9 332 aa11.09□□□□□ -0.63
CSTF3-202ENST00000431742 CCDC140Q96MF4 163 aa11.09□□□□□ -0.63
CSTF3-202ENST00000431742 HEYLQ9NQ87 328 aaPredicted RBP11.09□□□□□ -0.63
CSTF3-202ENST00000431742 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.08□□□□□ -0.64
CSTF3-202ENST00000431742 I3L2K1 104 aa11.08□□□□□ -0.64
CSTF3-202ENST00000431742 HSPB1P04792 205 aaKnown RBP11.08□□□□□ -0.64
CSTF3-202ENST00000431742 HTR2BP41595 481 aa11.08□□□□□ -0.64
CSTF3-202ENST00000431742 ID3Q02535 119 aa11.08□□□□□ -0.64
CSTF3-202ENST00000431742 IAH1Q2TAA2 248 aaPredicted RBP11.08□□□□□ -0.64
CSTF3-202ENST00000431742 FAM209BQ5JX69 171 aa11.08□□□□□ -0.64
CSTF3-202ENST00000431742 ZBTB8BQ8NAP8 495 aaPredicted RBP11.08□□□□□ -0.64
CSTF3-202ENST00000431742 WFDC9Q8NEX5 89 aa11.08□□□□□ -0.64
CSTF3-202ENST00000431742 SLC24A4Q8NFF2 622 aa11.08□□□□□ -0.64
CSTF3-202ENST00000431742 ZNF502Q8TBZ5 544 aa11.08□□□□□ -0.64
CSTF3-202ENST00000431742 EEF1AKMT3Q96AZ1 226 aa11.08□□□□□ -0.64
CSTF3-202ENST00000431742 PEF1Q9UBV8 284 aaKnown RBP11.08□□□□□ -0.64
CSTF3-202ENST00000431742 NOTCH3Q9UM47 2321 aa11.07□□□□□ -0.64
CSTF3-202ENST00000431742 ANKRD34BA5PLL1 514 aa11.07□□□□□ -0.64
CSTF3-202ENST00000431742 LINC01619G3V211 115 aa11.07□□□□□ -0.64
CSTF3-202ENST00000431742 SYNGR2O43760 224 aa11.07□□□□□ -0.64
CSTF3-202ENST00000431742 MED6O75586 246 aa11.07□□□□□ -0.64
CSTF3-202ENST00000431742 OR8U8P0C7N1 319 aa11.07□□□□□ -0.64
CSTF3-202ENST00000431742 OXA1LQ15070 435 aa11.07□□□□□ -0.64
CSTF3-202ENST00000431742 TATDN3Q17R31 274 aa11.07□□□□□ -0.64
CSTF3-202ENST00000431742 C2orf83Q53S99 150 aa11.07□□□□□ -0.64
CSTF3-202ENST00000431742 UXS1Q8NBZ7 420 aa11.07□□□□□ -0.64
CSTF3-202ENST00000431742 ATP6V0BQ99437 205 aa11.07□□□□□ -0.64
CSTF3-202ENST00000431742 HIPK2Q9H2X6 1198 aa11.07□□□□□ -0.64
CSTF3-202ENST00000431742 RANGRFQ9HD47 186 aaPredicted RBP11.07□□□□□ -0.64
CSTF3-202ENST00000431742 S4R3C0 116 aa11.07□□□□□ -0.64
CSTF3-202ENST00000431742 TRBV7-1A0A0A6YYK4 115 aa11.06□□□□□ -0.64
CSTF3-202ENST00000431742 F8W735 103 aaPredicted RBP11.06□□□□□ -0.64
CSTF3-202ENST00000431742 CORTO00230 105 aa11.06□□□□□ -0.64
CSTF3-202ENST00000431742 BMPR1BO00238 502 aa11.06□□□□□ -0.64
CSTF3-202ENST00000431742 MT-CO2P00403 227 aa11.06□□□□□ -0.64
CSTF3-202ENST00000431742 NPY1RP25929 384 aa11.06□□□□□ -0.64
CSTF3-202ENST00000431742 NKX2-1P43699 371 aaPredicted RBP11.06□□□□□ -0.64
CSTF3-202ENST00000431742 SUB1P53999 127 aaKnown RBP eCLIP11.06□□□□□ -0.643e-7■■■□□ 18.9
CSTF3-202ENST00000431742 SCARB1Q8WTV0 552 aa11.06□□□□□ -0.64
CSTF3-202ENST00000431742 DPF1Q92782 380 aa11.06□□□□□ -0.64
CSTF3-202ENST00000431742 MISP3Q96FF7 219 aa11.06□□□□□ -0.64
CSTF3-202ENST00000431742 MAGT1Q9H0U3 335 aa11.06□□□□□ -0.64
CSTF3-202ENST00000431742 U3KQ87 197 aa11.06□□□□□ -0.64
CSTF3-202ENST00000431742 DNAH3Q8TD57 4116 aa11.06□□□□□ -0.64
CSTF3-202ENST00000431742 NOTCH1P46531 2555 aa11.06□□□□□ -0.64
CSTF3-202ENST00000431742 IGHV3-23P01764 117 aa11.05□□□□□ -0.64
CSTF3-202ENST00000431742 IAPPP10997 89 aa11.05□□□□□ -0.64
CSTF3-202ENST00000431742 ZP3P21754 424 aa11.05□□□□□ -0.64
CSTF3-202ENST00000431742 HOXD3P31249 432 aaPredicted RBP11.05□□□□□ -0.64
CSTF3-202ENST00000431742 FCGR2BP31994 310 aaPredicted RBP11.05□□□□□ -0.64
CSTF3-202ENST00000431742 SLURP1P55000 103 aa11.05□□□□□ -0.64
CSTF3-202ENST00000431742 ATP5IP56385 69 aaPredicted RBP11.05□□□□□ -0.64
CSTF3-202ENST00000431742 POLR2GP62487 172 aaKnown RBP eCLIP11.05□□□□□ -0.64
CSTF3-202ENST00000431742 IL15RAQ13261 267 aa11.05□□□□□ -0.64
CSTF3-202ENST00000431742 GSG1LQ6UXU4 331 aa11.05□□□□□ -0.64
CSTF3-202ENST00000431742 C2orf50Q96LR7 162 aa11.05□□□□□ -0.64
CSTF3-202ENST00000431742 CIB3Q96Q77 187 aaPredicted RBP11.05□□□□□ -0.64
CSTF3-202ENST00000431742 FNDC4Q9H6D8 234 aaPredicted RBP11.05□□□□□ -0.64
CSTF3-202ENST00000431742 C21orf62Q9NYP8 219 aa11.05□□□□□ -0.64
CSTF3-202ENST00000431742 RCL1Q9Y2P8 373 aaKnown RBP11.05□□□□□ -0.64
CSTF3-202ENST00000431742 ALG5Q9Y673 324 aa11.05□□□□□ -0.64
CSTF3-202ENST00000431742 IGHV3-21A0A0B4J1V1 117 aa11.04□□□□□ -0.64
CSTF3-202ENST00000431742 C5orf51A6NDU8 294 aa11.04□□□□□ -0.64
CSTF3-202ENST00000431742 FAM25EA8MYX2 175 aa11.04□□□□□ -0.64
CSTF3-202ENST00000431742 PPP5D1E7EU14 171 aa11.04□□□□□ -0.64
CSTF3-202ENST00000431742 LY86O95711 162 aa11.04□□□□□ -0.64
CSTF3-202ENST00000431742 MBPP02686 304 aaPredicted RBP11.04□□□□□ -0.64
CSTF3-202ENST00000431742 GPR183P32249 361 aa11.04□□□□□ -0.64
CSTF3-202ENST00000431742 CLEC19AQ6UXS0 136 aa11.04□□□□□ -0.64
CSTF3-202ENST00000431742 RNASEH2CQ8TDP1 164 aaKnown RBP11.04□□□□□ -0.64
CSTF3-202ENST00000431742 GSKIPQ9P0R6 139 aa11.04□□□□□ -0.64
CSTF3-202ENST00000431742 C15orf62A8K5M9 175 aa11.03□□□□□ -0.64
CSTF3-202ENST00000431742 GOSR2O14653 212 aa11.03□□□□□ -0.64
CSTF3-202ENST00000431742 TMEM50AO95807 157 aa11.03□□□□□ -0.64
CSTF3-202ENST00000431742 IFNA10P01566 189 aa11.03□□□□□ -0.64
CSTF3-202ENST00000431742 CD33P20138 364 aa11.03□□□□□ -0.64
CSTF3-202ENST00000431742 ARL3P36405 182 aa11.03□□□□□ -0.64
CSTF3-202ENST00000431742 NOXA1Q86UR1 476 aa11.03□□□□□ -0.64
CSTF3-202ENST00000431742 DCUN1D4Q92564 292 aa11.03□□□□□ -0.64
CSTF3-202ENST00000431742 DLX4Q92988 240 aaPredicted RBP11.03□□□□□ -0.64
CSTF3-202ENST00000431742 PINX1Q96BK5 328 aaKnown RBP11.03□□□□□ -0.64
CSTF3-202ENST00000431742 OR4C12Q96R67 309 aa11.03□□□□□ -0.64
CSTF3-202ENST00000431742 TXN2Q99757 166 aa11.03□□□□□ -0.64
CSTF3-202ENST00000431742 WRBO00258 174 aa11.02□□□□□ -0.65
CSTF3-202ENST00000431742 TGOLN2O43493 480 aa11.02□□□□□ -0.65
CSTF3-202ENST00000431742 SSNA1O43805 119 aa11.02□□□□□ -0.65
CSTF3-202ENST00000431742 SSSCA1O60232 199 aa11.02□□□□□ -0.65
CSTF3-202ENST00000431742 GGCTO75223 188 aaKnown RBP11.02□□□□□ -0.65
CSTF3-202ENST00000431742 SCGB1D2O95969 90 aa11.02□□□□□ -0.65
CSTF3-202ENST00000431742 CLEC3BP05452 202 aa11.02□□□□□ -0.65
CSTF3-202ENST00000431742 ADMP35318 185 aa11.02□□□□□ -0.65
CSTF3-202ENST00000431742 OPRK1P41145 380 aa11.02□□□□□ -0.65
CSTF3-202ENST00000431742 MFAP4P55083 255 aa11.02□□□□□ -0.65
CSTF3-202ENST00000431742 PAX9P55771 341 aa11.02□□□□□ -0.65
CSTF3-202ENST00000431742 H2BFSP57053 126 aa11.02□□□□□ -0.65
CSTF3-202ENST00000431742 KLF5Q13887 457 aaPredicted RBP11.02□□□□□ -0.65
CSTF3-202ENST00000431742 BSCL2Q96G97 398 aaPredicted RBP11.02□□□□□ -0.65
CSTF3-202ENST00000431742 RCC1LQ96I51 464 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms