RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 LOC105371267A0A1B0GV96 52 aa13.97□□□□□ -0.17
RIF1-204ENST00000430328 A8MXK9 166 aa13.97□□□□□ -0.17
RIF1-204ENST00000430328 FOXH1O75593 365 aa13.97□□□□□ -0.17
RIF1-204ENST00000430328 C1QTNF9P0C862 333 aa13.97□□□□□ -0.17
RIF1-204ENST00000430328 MAST2Q6P0Q8 1798 aa13.96□□□□□ -0.17
RIF1-204ENST00000430328 UBL5Q9BZL1 73 aa13.96□□□□□ -0.17
RIF1-204ENST00000430328 PDCD11Q14690 1871 aaKnown RBP13.96□□□□□ -0.17
RIF1-204ENST00000430328 OTORQ9NRC9 128 aa13.96□□□□□ -0.17
RIF1-204ENST00000430328 C9JAW5 83 aa13.96□□□□□ -0.17
RIF1-204ENST00000430328 IGFBP2P18065 325 aa13.96□□□□□ -0.17
RIF1-204ENST00000430328 ZNF826PQ6ZT77 177 aa13.96□□□□□ -0.18
RIF1-204ENST00000430328 TM4SF4P48230 202 aa13.96□□□□□ -0.18
RIF1-204ENST00000430328 RHOGP84095 191 aa13.96□□□□□ -0.18
RIF1-204ENST00000430328 PRADC1Q9BSG0 188 aa13.96□□□□□ -0.18
RIF1-204ENST00000430328 NPDC1Q9NQX5 325 aaPredicted RBP13.96□□□□□ -0.18
RIF1-204ENST00000430328 FBXL7Q9UJT9 491 aa13.96□□□□□ -0.18
RIF1-204ENST00000430328 CLPSL1A2RUU4 121 aa13.95□□□□□ -0.18
RIF1-204ENST00000430328 PIK3C2AO00443 1686 aa13.95□□□□□ -0.18
RIF1-204ENST00000430328 FOXL1Q12952 345 aa13.95□□□□□ -0.18
RIF1-204ENST00000430328 IFI27L2Q9H2X8 130 aa13.95□□□□□ -0.18
RIF1-204ENST00000430328 FOCADQ5VW36 1801 aa13.95□□□□□ -0.18
RIF1-204ENST00000430328 ZP4Q12836 540 aa13.95□□□□□ -0.18
RIF1-204ENST00000430328 C21orf62Q9NYP8 219 aa13.95□□□□□ -0.18
RIF1-204ENST00000430328 LHX2P50458 406 aa13.95□□□□□ -0.18
RIF1-204ENST00000430328 TOGARAM1Q9Y4F4 1720 aa13.95□□□□□ -0.18
RIF1-204ENST00000430328 CACNG8Q8WXS5 425 aa13.95□□□□□ -0.18
RIF1-204ENST00000430328 PRSS23O95084 383 aa13.95□□□□□ -0.18
RIF1-204ENST00000430328 ADAMTSL5Q6ZMM2 481 aa13.95□□□□□ -0.18
RIF1-204ENST00000430328 UBE2CO00762 179 aa13.94□□□□□ -0.18
RIF1-204ENST00000430328 UBE2DNLQ8IWF7 75 aa13.94□□□□□ -0.18
RIF1-204ENST00000430328 ATP5J2P56134 94 aa13.94□□□□□ -0.18
RIF1-204ENST00000430328 KLHDC2Q9Y2U9 406 aa13.94□□□□□ -0.18
RIF1-204ENST00000430328 PSCAO43653 123 aa13.94□□□□□ -0.18
RIF1-204ENST00000430328 UPK3AO75631 287 aa13.94□□□□□ -0.18
RIF1-204ENST00000430328 CD33P20138 364 aa13.94□□□□□ -0.18
RIF1-204ENST00000430328 COL9A1P20849 921 aa13.94□□□□□ -0.18
RIF1-204ENST00000430328 FAM90A2PQ658T7 463 aa13.94□□□□□ -0.18
RIF1-204ENST00000430328 GTSCR1Q86UQ5 136 aa13.94□□□□□ -0.18
RIF1-204ENST00000430328 SVIPQ8NHG7 77 aa13.94□□□□□ -0.18
RIF1-204ENST00000430328 GLMPQ8WWB7 406 aa13.94□□□□□ -0.18
RIF1-204ENST00000430328 C2CD4DB7Z1M9 353 aa13.94□□□□□ -0.18
RIF1-204ENST00000430328 PDLIM4P50479 330 aa13.94□□□□□ -0.18
RIF1-204ENST00000430328 CCL19Q99731 98 aa13.94□□□□□ -0.18
RIF1-204ENST00000430328 ATP5G3P48201 142 aa13.94□□□□□ -0.18
RIF1-204ENST00000430328 RPL23P62829 140 aaKnown RBP13.94□□□□□ -0.18
RIF1-204ENST00000430328 TAF1P21675 1872 aa13.94□□□□□ -0.18
RIF1-204ENST00000430328 CHAC1Q9BUX1 264 aa13.93□□□□□ -0.18
RIF1-204ENST00000430328 CCL20P78556 96 aa13.93□□□□□ -0.18
RIF1-204ENST00000430328 RASL10AQ92737 203 aa13.93□□□□□ -0.18
RIF1-204ENST00000430328 TMEM126AQ9H061 195 aa13.93□□□□□ -0.18
RIF1-204ENST00000430328 RAMP1O60894 148 aa13.93□□□□□ -0.18
RIF1-204ENST00000430328 C6orf226Q5I0X4 101 aa13.93□□□□□ -0.18
RIF1-204ENST00000430328 TRGV11A0A075B6L2 103 aa13.93□□□□□ -0.18
RIF1-204ENST00000430328 GAGE12JA6NER3 117 aa13.93□□□□□ -0.18
RIF1-204ENST00000430328 GAGE1Q13065 139 aa13.93□□□□□ -0.18
RIF1-204ENST00000430328 GAGE4Q13068 117 aa13.93□□□□□ -0.18
RIF1-204ENST00000430328 GAGE5Q13069 117 aa13.93□□□□□ -0.18
RIF1-204ENST00000430328 GAGE6Q13070 117 aa13.93□□□□□ -0.18
RIF1-204ENST00000430328 DUSP14O95147 198 aaKnown RBP13.93□□□□□ -0.18
RIF1-204ENST00000430328 ZNF708P17019 499 aa13.93□□□□□ -0.18
RIF1-204ENST00000430328 CLEC19AQ6UXS0 136 aa13.93□□□□□ -0.18
RIF1-204ENST00000430328 TMEM8BA6NDV4 472 aa13.93□□□□□ -0.18
RIF1-204ENST00000430328 TFF3Q07654 80 aa13.93□□□□□ -0.18
RIF1-204ENST00000430328 NAA38Q9BRA0 125 aaKnown RBP13.93□□□□□ -0.18
RIF1-204ENST00000430328 AHRRA9YTQ3 701 aa13.92□□□□□ -0.18
RIF1-204ENST00000430328 PSG1P11464 419 aa13.92□□□□□ -0.18
RIF1-204ENST00000430328 TNCP24821 2201 aa13.92□□□□□ -0.18
RIF1-204ENST00000430328 TNRC6AQ8NDV7 1962 aaKnown RBP13.92□□□□□ -0.18
RIF1-204ENST00000430328 SELLP14151 372 aa13.92□□□□□ -0.18
RIF1-204ENST00000430328 POU2AF1Q16633 256 aa13.92□□□□□ -0.18
RIF1-204ENST00000430328 FAM214BQ7L5A3 538 aa13.92□□□□□ -0.18
RIF1-204ENST00000430328 CXCL16Q9H2A7 254 aa13.92□□□□□ -0.18
RIF1-204ENST00000430328 PILRBQ9UKJ0 227 aa13.92□□□□□ -0.18
RIF1-204ENST00000430328 SLC50A1Q9BRV3 221 aa13.92□□□□□ -0.18
RIF1-204ENST00000430328 KIR3DS1Q14943 382 aa13.92□□□□□ -0.18
RIF1-204ENST00000430328 FBXL15Q9H469 300 aa13.92□□□□□ -0.18
RIF1-204ENST00000430328 TEX43Q6ZNM6 134 aa13.92□□□□□ -0.18
RIF1-204ENST00000430328 OSR1Q8TAX0 266 aaPredicted RBP13.92□□□□□ -0.18
RIF1-204ENST00000430328 HIST1H2BKO60814 126 aa13.91□□□□□ -0.18
RIF1-204ENST00000430328 HIST1H2BJP06899 126 aa13.91□□□□□ -0.18
RIF1-204ENST00000430328 EGR2P11161 476 aaPredicted RBP13.91□□□□□ -0.18
RIF1-204ENST00000430328 HIST1H2BOP23527 126 aa13.91□□□□□ -0.18
RIF1-204ENST00000430328 HIST1H2BBP33778 126 aa13.91□□□□□ -0.18
RIF1-204ENST00000430328 HIST1H2BDP58876 126 aa13.91□□□□□ -0.18
RIF1-204ENST00000430328 HIST1H2BCP62807 126 aa13.91□□□□□ -0.18
RIF1-204ENST00000430328 PSG3Q16557 428 aa13.91□□□□□ -0.18
RIF1-204ENST00000430328 HIST2H2BEQ16778 126 aa13.91□□□□□ -0.18
RIF1-204ENST00000430328 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.91□□□□□ -0.18
RIF1-204ENST00000430328 HIST1H2BHQ93079 126 aa13.91□□□□□ -0.18
RIF1-204ENST00000430328 HIST1H2BNQ99877 126 aa13.91□□□□□ -0.18
RIF1-204ENST00000430328 HIST1H2BMQ99879 126 aa13.91□□□□□ -0.18
RIF1-204ENST00000430328 A0A087X0K7 114 aa13.91□□□□□ -0.18
RIF1-204ENST00000430328 OR5P3Q8WZ94 311 aa13.91□□□□□ -0.18
RIF1-204ENST00000430328 SLC25A38Q96DW6 304 aa13.91□□□□□ -0.18
RIF1-204ENST00000430328 FAM60AQ9NP50 221 aa13.91□□□□□ -0.18
RIF1-204ENST00000430328 OSTCQ9NRP0 149 aa13.91□□□□□ -0.18
RIF1-204ENST00000430328 GUSBP1Q15486 140 aa13.91□□□□□ -0.18
RIF1-204ENST00000430328 TRBV20-1A0A075B6N2 111 aa13.91□□□□□ -0.18
RIF1-204ENST00000430328 TTTY12Q9BZ98 90 aa13.91□□□□□ -0.18
RIF1-204ENST00000430328 PRR33A8MZF0 331 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms