RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 C2orf83Q53S99 150 aa10.69□□□□□ -0.7
PTCH1-207ENST00000429896 MIC13Q5XKP0 118 aa10.69□□□□□ -0.7
PTCH1-207ENST00000429896 NR2C2APQ86WQ0 139 aa10.69□□□□□ -0.7
PTCH1-207ENST00000429896 CLDND2Q8NHS1 167 aa10.69□□□□□ -0.7
PTCH1-207ENST00000429896 SOD3P08294 240 aa10.69□□□□□ -0.7
PTCH1-207ENST00000429896 SYT8Q8NBV8 401 aa10.69□□□□□ -0.7
PTCH1-207ENST00000429896 TCF21O43680 179 aa10.69□□□□□ -0.7
PTCH1-207ENST00000429896 PDE6DO43924 150 aa10.69□□□□□ -0.7
PTCH1-207ENST00000429896 PRSS2P07478 247 aa10.69□□□□□ -0.7
PTCH1-207ENST00000429896 MAPK1IP1LQ8NDC0 245 aa10.69□□□□□ -0.7
PTCH1-207ENST00000429896 GFI1Q99684 422 aa10.69□□□□□ -0.7
PTCH1-207ENST00000429896 ATOH7Q8N100 152 aa10.69□□□□□ -0.7
PTCH1-207ENST00000429896 GPR146Q96CH1 333 aa10.69□□□□□ -0.7
PTCH1-207ENST00000429896 HSPB7Q9UBY9 170 aa10.69□□□□□ -0.7
PTCH1-207ENST00000429896 IGKV3D-20A0A0C4DH25 116 aa10.68□□□□□ -0.7
PTCH1-207ENST00000429896 E9PQ18 207 aa10.68□□□□□ -0.7
PTCH1-207ENST00000429896 F8VVB4 439 aa10.68□□□□□ -0.7
PTCH1-207ENST00000429896 F8VWA3 439 aa10.68□□□□□ -0.7
PTCH1-207ENST00000429896 TP53RKQ96S44 253 aa10.68□□□□□ -0.7
PTCH1-207ENST00000429896 C7orf71A4D174 169 aa10.68□□□□□ -0.7
PTCH1-207ENST00000429896 PSPNO60542 156 aa10.68□□□□□ -0.7
PTCH1-207ENST00000429896 KLRD1Q13241 179 aa10.68□□□□□ -0.7
PTCH1-207ENST00000429896 MEIG1Q5JSS6 88 aa10.68□□□□□ -0.7
PTCH1-207ENST00000429896 DPH3P1Q9H4G8 78 aa10.68□□□□□ -0.7
PTCH1-207ENST00000429896 SNRNP200O75643 2136 aaKnown RBP10.68□□□□□ -0.7
PTCH1-207ENST00000429896 DIRC3C9JPN6 131 aa10.68□□□□□ -0.7
PTCH1-207ENST00000429896 FBXL19-AS1Q494R0 122 aa10.68□□□□□ -0.7
PTCH1-207ENST00000429896 HEPN1Q6WQI6 88 aa10.68□□□□□ -0.7
PTCH1-207ENST00000429896 PQLC2Q6ZP29 291 aa10.68□□□□□ -0.7
PTCH1-207ENST00000429896 C11orf44Q8N8P7 122 aa10.68□□□□□ -0.7
PTCH1-207ENST00000429896 C5orf66Q9H5L9 145 aa10.68□□□□□ -0.7
PTCH1-207ENST00000429896 HINT1P49773 126 aaPredicted RBP10.68□□□□□ -0.7
PTCH1-207ENST00000429896 PPP1R27Q86WC6 154 aa10.68□□□□□ -0.7
PTCH1-207ENST00000429896 EEF1AKMT3Q96AZ1 226 aa10.68□□□□□ -0.7
PTCH1-207ENST00000429896 A0A0A6YYD4 124 aa10.68□□□□□ -0.7
PTCH1-207ENST00000429896 GPX1P07203 203 aa10.68□□□□□ -0.7
PTCH1-207ENST00000429896 MINOS1Q5TGZ0 78 aa10.68□□□□□ -0.7
PTCH1-207ENST00000429896 TBL2Q9Y4P3 447 aaKnown RBP10.68□□□□□ -0.7
PTCH1-207ENST00000429896 MINOS1-NBL1R4GNA1 71 aa10.68□□□□□ -0.7
PTCH1-207ENST00000429896 NBR2O15453 112 aa10.68□□□□□ -0.7
PTCH1-207ENST00000429896 TMEM56-RWDD3S4R434 201 aa10.68□□□□□ -0.7
PTCH1-207ENST00000429896 C7orf77A4D0Y5 90 aa10.67□□□□□ -0.7
PTCH1-207ENST00000429896 AMY1AP04745 511 aa10.67□□□□□ -0.7
PTCH1-207ENST00000429896 RND2P52198 227 aa10.67□□□□□ -0.7
PTCH1-207ENST00000429896 FAM106AQ4KMX7 169 aa10.67□□□□□ -0.7
PTCH1-207ENST00000429896 NPFFO15130 113 aa10.67□□□□□ -0.7
PTCH1-207ENST00000429896 CYB561D1Q8N8Q1 229 aa10.67□□□□□ -0.7
PTCH1-207ENST00000429896 ARPC1AQ92747 370 aa10.67□□□□□ -0.7
PTCH1-207ENST00000429896 IFT22Q9H7X7 185 aa10.67□□□□□ -0.7
PTCH1-207ENST00000429896 MFAP4P55083 255 aa10.67□□□□□ -0.7
PTCH1-207ENST00000429896 REG4Q9BYZ8 158 aa10.67□□□□□ -0.7
PTCH1-207ENST00000429896 TRGV3P03979 118 aa10.67□□□□□ -0.7
PTCH1-207ENST00000429896 MRAP2Q96G30 205 aa10.67□□□□□ -0.7
PTCH1-207ENST00000429896 COL6A6A6NMZ7 2263 aa10.67□□□□□ -0.7
PTCH1-207ENST00000429896 TMEM218A2RU14 115 aa10.67□□□□□ -0.7
PTCH1-207ENST00000429896 ANOS1P23352 680 aa10.67□□□□□ -0.7
PTCH1-207ENST00000429896 BTCP35070 178 aa10.67□□□□□ -0.7
PTCH1-207ENST00000429896 MEOX2P50222 304 aa10.67□□□□□ -0.7
PTCH1-207ENST00000429896 KIAA1644Q3SXP7 199 aa10.67□□□□□ -0.7
PTCH1-207ENST00000429896 Q6P435 159 aa10.67□□□□□ -0.7
PTCH1-207ENST00000429896 BRD3OSQ6XYD6 125 aa10.67□□□□□ -0.7
PTCH1-207ENST00000429896 CACNG7P62955 275 aa10.66□□□□□ -0.7
PTCH1-207ENST00000429896 OR4A47Q6IF82 309 aa10.66□□□□□ -0.7
PTCH1-207ENST00000429896 RARRES2Q99969 163 aa10.66□□□□□ -0.7
PTCH1-207ENST00000429896 TIMM23O14925 209 aa10.66□□□□□ -0.7
PTCH1-207ENST00000429896 RAX2Q96IS3 184 aa10.66□□□□□ -0.7
PTCH1-207ENST00000429896 FOXI3A8MTJ6 420 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-207ENST00000429896 WFDC12Q8WWY7 111 aa10.66□□□□□ -0.7
PTCH1-207ENST00000429896 MPDU1O75352 247 aa10.66□□□□□ -0.7
PTCH1-207ENST00000429896 NMBP08949 121 aa10.66□□□□□ -0.7
PTCH1-207ENST00000429896 WNT2P09544 360 aa10.66□□□□□ -0.7
PTCH1-207ENST00000429896 RND3P61587 244 aa10.66□□□□□ -0.7
PTCH1-207ENST00000429896 TMEM187Q14656 261 aa10.66□□□□□ -0.7
PTCH1-207ENST00000429896 SRSF7Q16629 238 aaKnown RBP eCLIP10.66□□□□□ -0.7
PTCH1-207ENST00000429896 C17orf98A8MV24 154 aa10.66□□□□□ -0.7
PTCH1-207ENST00000429896 OOSP1A8MZH6 123 aa10.66□□□□□ -0.7
PTCH1-207ENST00000429896 B4DEV8 164 aa10.66□□□□□ -0.7
PTCH1-207ENST00000429896 FAM90A26D6RGX4 464 aa10.66□□□□□ -0.7
PTCH1-207ENST00000429896 M0R143 59 aa10.66□□□□□ -0.7
PTCH1-207ENST00000429896 HIST1H1AQ02539 215 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-207ENST00000429896 SGMS2Q8NHU3 365 aa10.66□□□□□ -0.7
PTCH1-207ENST00000429896 IBA57Q5T440 356 aaKnown RBP10.65□□□□□ -0.7
PTCH1-207ENST00000429896 H2BFSP57053 126 aa10.65□□□□□ -0.7
PTCH1-207ENST00000429896 ZNF660Q6AZW8 331 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-207ENST00000429896 LAMTOR1Q6IAA8 161 aa10.65□□□□□ -0.7
PTCH1-207ENST00000429896 HIST1H4GQ99525 98 aa10.65□□□□□ -0.7
PTCH1-207ENST00000429896 SH3BGRL3Q9H299 93 aa10.65□□□□□ -0.7
PTCH1-207ENST00000429896 ZFP30Q9Y2G7 519 aa10.65□□□□□ -0.7
PTCH1-207ENST00000429896 TPTE2P1Q5T6R2 138 aa10.65□□□□□ -0.7
PTCH1-207ENST00000429896 SRSF12Q8WXF0 261 aaKnown RBP10.65□□□□□ -0.7
PTCH1-207ENST00000429896 GPR82Q96P67 336 aa10.65□□□□□ -0.7
PTCH1-207ENST00000429896 HSPB9Q9BQS6 159 aa10.65□□□□□ -0.7
PTCH1-207ENST00000429896 ATG101Q9BSB4 218 aa10.65□□□□□ -0.7
PTCH1-207ENST00000429896 TCF19Q9Y242 345 aa10.65□□□□□ -0.7
PTCH1-207ENST00000429896 TRAV30A0A087WSZ9 112 aa10.65□□□□□ -0.7
PTCH1-207ENST00000429896 PITX3O75364 302 aa10.65□□□□□ -0.7
PTCH1-207ENST00000429896 ZNF256Q9Y2P7 627 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-207ENST00000429896 A6NDN8 102 aa10.65□□□□□ -0.71
PTCH1-207ENST00000429896 ARL14EPLP0DKL9 152 aa10.65□□□□□ -0.71
PTCH1-207ENST00000429896 SPATA45Q537H7 98 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms