RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 GAGE10A6NGK3 116 aa9.1□□□□□ -0.95
SEMA4D-209ENST00000429836 OOEPA6NGQ2 149 aa9.1□□□□□ -0.95
SEMA4D-209ENST00000429836 C21orf140B9A014 251 aa9.1□□□□□ -0.95
SEMA4D-209ENST00000429836 GDF1P27539 372 aa9.1□□□□□ -0.95
SEMA4D-209ENST00000429836 PRR20EP86478 221 aa9.1□□□□□ -0.95
SEMA4D-209ENST00000429836 PRR20CP86479 221 aa9.1□□□□□ -0.95
SEMA4D-209ENST00000429836 PRR20DP86480 221 aa9.1□□□□□ -0.95
SEMA4D-209ENST00000429836 PRR20BP86481 221 aa9.1□□□□□ -0.95
SEMA4D-209ENST00000429836 PRR20AP86496 221 aa9.1□□□□□ -0.95
SEMA4D-209ENST00000429836 PLP2Q04941 152 aa9.1□□□□□ -0.95
SEMA4D-209ENST00000429836 OR1C1Q15619 314 aa9.1□□□□□ -0.95
SEMA4D-209ENST00000429836 SCRT2Q9NQ03 307 aa9.1□□□□□ -0.95
SEMA4D-209ENST00000429836 METRNQ9UJH8 293 aa9.1□□□□□ -0.95
SEMA4D-209ENST00000429836 IGHV5-10-1A0A0J9YXX1 117 aa9.1□□□□□ -0.95
SEMA4D-209ENST00000429836 PINLYPA6NC86 204 aa9.1□□□□□ -0.95
SEMA4D-209ENST00000429836 CER1O95813 267 aa9.1□□□□□ -0.95
SEMA4D-209ENST00000429836 ZNF138P52744 262 aa9.1□□□□□ -0.95
SEMA4D-209ENST00000429836 ZNF146Q15072 292 aa9.1□□□□□ -0.95
SEMA4D-209ENST00000429836 RPL39P5Q59GN2 51 aa9.1□□□□□ -0.95
SEMA4D-209ENST00000429836 SGK494Q96LW2 274 aa9.1□□□□□ -0.95
SEMA4D-209ENST00000429836 CLUHP3Q96NS8 147 aa9.1□□□□□ -0.95
SEMA4D-209ENST00000429836 TMEM167BQ9NRX6 74 aa9.1□□□□□ -0.95
SEMA4D-209ENST00000429836 PEF1Q9UBV8 284 aaKnown RBP9.1□□□□□ -0.95
SEMA4D-209ENST00000429836 ZNF835Q9Y2P0 537 aa9.1□□□□□ -0.95
SEMA4D-209ENST00000429836 ZDBF2Q9HCK1 2354 aa9.09□□□□□ -0.95
SEMA4D-209ENST00000429836 TRAV5A0A0B4J249 113 aa9.09□□□□□ -0.95
SEMA4D-209ENST00000429836 HIGD1CA8MV81 97 aa9.09□□□□□ -0.95
SEMA4D-209ENST00000429836 DUTP33316 252 aaKnown RBP9.09□□□□□ -0.95
SEMA4D-209ENST00000429836 WIPF2Q8TF74 440 aaPredicted RBP9.09□□□□□ -0.95
SEMA4D-209ENST00000429836 CT55Q8WUE5 264 aa9.09□□□□□ -0.95
SEMA4D-209ENST00000429836 LOC400499M0QZD8 3231 aa9.09□□□□□ -0.95
SEMA4D-209ENST00000429836 LEPROTL1O95214 131 aa9.09□□□□□ -0.95
SEMA4D-209ENST00000429836 GPR12P47775 334 aa9.09□□□□□ -0.95
SEMA4D-209ENST00000429836 RAB31Q13636 194 aa9.09□□□□□ -0.95
SEMA4D-209ENST00000429836 SMIM21Q3B7S5 101 aa9.09□□□□□ -0.95
SEMA4D-209ENST00000429836 SLC35E4Q6ICL7 350 aa9.09□□□□□ -0.95
SEMA4D-209ENST00000429836 MBD6Q96DN6 1003 aa9.09□□□□□ -0.95
SEMA4D-209ENST00000429836 TMEM140Q9NV12 185 aa9.09□□□□□ -0.95
SEMA4D-209ENST00000429836 DUSP13Q9UII6 198 aa9.09□□□□□ -0.95
SEMA4D-209ENST00000429836 POLDIP2Q9Y2S7 368 aa9.09□□□□□ -0.95
SEMA4D-209ENST00000429836 NCOR1O75376 2440 aa9.08□□□□□ -0.96
SEMA4D-209ENST00000429836 TNCP24821 2201 aa9.08□□□□□ -0.96
SEMA4D-209ENST00000429836 APOA2P02652 100 aa9.08□□□□□ -0.96
SEMA4D-209ENST00000429836 SP1P08047 785 aa9.08□□□□□ -0.96
SEMA4D-209ENST00000429836 GPR183P32249 361 aa9.08□□□□□ -0.96
SEMA4D-209ENST00000429836 MORN5Q5VZ52 161 aa9.08□□□□□ -0.96
SEMA4D-209ENST00000429836 TCF24Q7RTU0 167 aa9.08□□□□□ -0.96
SEMA4D-209ENST00000429836 SLC25A40Q8TBP6 338 aa9.08□□□□□ -0.96
SEMA4D-209ENST00000429836 JMJD8Q96S16 334 aa9.08□□□□□ -0.96
SEMA4D-209ENST00000429836 LOC102723996A0A087X1L8 192 aa9.08□□□□□ -0.96
SEMA4D-209ENST00000429836 PAX2Q02962 417 aa9.08□□□□□ -0.96
SEMA4D-209ENST00000429836 MRPL49Q13405 166 aaKnown RBP9.08□□□□□ -0.96
SEMA4D-209ENST00000429836 MLANAQ16655 118 aa9.08□□□□□ -0.96
SEMA4D-209ENST00000429836 NRN1LQ496H8 165 aa9.08□□□□□ -0.96
SEMA4D-209ENST00000429836 Q8IYB0 196 aa9.08□□□□□ -0.96
SEMA4D-209ENST00000429836 WDR31Q8NA23 367 aa9.08□□□□□ -0.96
SEMA4D-209ENST00000429836 OR1N2Q8NGR9 330 aa9.08□□□□□ -0.96
SEMA4D-209ENST00000429836 SLC25A10Q9UBX3 287 aaPredicted RBP9.08□□□□□ -0.96
SEMA4D-209ENST00000429836 IGKV1OR2-108A0A075B7D4 117 aa9.07□□□□□ -0.96
SEMA4D-209ENST00000429836 CRXO43186 299 aaPredicted RBP9.07□□□□□ -0.96
SEMA4D-209ENST00000429836 CELA3AP09093 270 aa9.07□□□□□ -0.96
SEMA4D-209ENST00000429836 TCTAP57738 103 aa9.07□□□□□ -0.96
SEMA4D-209ENST00000429836 ERVK-16P61578 105 aa9.07□□□□□ -0.96
SEMA4D-209ENST00000429836 HIST1H1AQ02539 215 aaPredicted RBP9.07□□□□□ -0.96
SEMA4D-209ENST00000429836 EDDM3AQ14507 147 aa9.07□□□□□ -0.96
SEMA4D-209ENST00000429836 OR2V2Q96R30 315 aa9.07□□□□□ -0.96
SEMA4D-209ENST00000429836 TMEM191AQ9H0A3 160 aa9.07□□□□□ -0.96
SEMA4D-209ENST00000429836 G3V4G9 280 aa9.07□□□□□ -0.96
SEMA4D-209ENST00000429836 OR2J3O76001 311 aa9.07□□□□□ -0.96
SEMA4D-209ENST00000429836 CD46P15529 392 aa9.07□□□□□ -0.96
SEMA4D-209ENST00000429836 LINC00696Q6ZRV3 163 aa9.07□□□□□ -0.96
SEMA4D-209ENST00000429836 C2orf91Q6ZV80 131 aa9.07□□□□□ -0.96
SEMA4D-209ENST00000429836 GRAMD2BQ96HH9 432 aa9.07□□□□□ -0.96
SEMA4D-209ENST00000429836 A0A1W2PRE2 83 aa9.06□□□□□ -0.96
SEMA4D-209ENST00000429836 ZNF137PP52743 207 aa9.06□□□□□ -0.96
SEMA4D-209ENST00000429836 C5orf17Q8NAS9 161 aa9.06□□□□□ -0.96
SEMA4D-209ENST00000429836 DSPP15924 2871 aaKnown RBP9.06□□□□□ -0.96
SEMA4D-209ENST00000429836 J3QR06 171 aa9.06□□□□□ -0.96
SEMA4D-209ENST00000429836 KLF7O75840 302 aaPredicted RBP9.06□□□□□ -0.96
SEMA4D-209ENST00000429836 UTF1Q5T230 341 aa9.06□□□□□ -0.96
SEMA4D-209ENST00000429836 UFSP1Q6NVU6 142 aa9.06□□□□□ -0.96
SEMA4D-209ENST00000429836 LINC00470Q9BZP3 86 aa9.06□□□□□ -0.96
SEMA4D-209ENST00000429836 C12orf49Q9H741 205 aa9.06□□□□□ -0.96
SEMA4D-209ENST00000429836 KLF13Q9Y2Y9 288 aaPredicted RBP9.06□□□□□ -0.96
SEMA4D-209ENST00000429836 HILPDAQ9Y5L2 63 aa9.06□□□□□ -0.96
SEMA4D-209ENST00000429836 ZFHX4Q86UP3 3567 aa9.06□□□□□ -0.96
SEMA4D-209ENST00000429836 PRR14LQ5THK1 2151 aa9.06□□□□□ -0.96
SEMA4D-209ENST00000429836 H3BUT2 72 aa9.06□□□□□ -0.96
SEMA4D-209ENST00000429836 GNG7O60262 68 aa9.06□□□□□ -0.96
SEMA4D-209ENST00000429836 PYYP10082 97 aa9.06□□□□□ -0.96
SEMA4D-209ENST00000429836 HTR1DP28221 377 aa9.06□□□□□ -0.96
SEMA4D-209ENST00000429836 ARF6P62330 175 aa9.06□□□□□ -0.96
SEMA4D-209ENST00000429836 GNG5P63218 68 aa9.06□□□□□ -0.96
SEMA4D-209ENST00000429836 UBE2L3P68036 154 aaKnown RBP9.06□□□□□ -0.96
SEMA4D-209ENST00000429836 C3AR1Q16581 482 aa9.06□□□□□ -0.96
SEMA4D-209ENST00000429836 HES3Q5TGS1 186 aa9.06□□□□□ -0.96
SEMA4D-209ENST00000429836 RASL11AQ6T310 242 aa9.06□□□□□ -0.96
SEMA4D-209ENST00000429836 MDP1Q86V88 176 aa9.06□□□□□ -0.96
SEMA4D-209ENST00000429836 GNG12Q9UBI6 72 aa9.06□□□□□ -0.96
SEMA4D-209ENST00000429836 GPR179Q6PRD1 2367 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms