RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 ADH4P08319 380 aa10.25□□□□□ -0.77
CDH3-202ENST00000429102 WT1P19544 449 aaPredicted RBP10.25□□□□□ -0.77
CDH3-202ENST00000429102 FOXL1Q12952 345 aa10.25□□□□□ -0.77
CDH3-202ENST00000429102 VAMP3Q15836 100 aa10.25□□□□□ -0.77
CDH3-202ENST00000429102 LEMD1Q68G75 181 aa10.25□□□□□ -0.77
CDH3-202ENST00000429102 TMEM144Q7Z5S9 345 aa10.25□□□□□ -0.77
CDH3-202ENST00000429102 DEFB123Q8N688 67 aa10.25□□□□□ -0.77
CDH3-202ENST00000429102 OR4S2Q8NH73 311 aa10.25□□□□□ -0.77
CDH3-202ENST00000429102 NEU1Q99519 415 aa10.25□□□□□ -0.77
CDH3-202ENST00000429102 NRN1Q9NPD7 142 aa10.25□□□□□ -0.77
CDH3-202ENST00000429102 TLN1Q9Y490 2541 aaKnown RBP10.24□□□□□ -0.77
CDH3-202ENST00000429102 SH2D7A6NKC9 451 aaPredicted RBP10.24□□□□□ -0.77
CDH3-202ENST00000429102 CCL3L1P16619 93 aa10.24□□□□□ -0.77
CDH3-202ENST00000429102 VDAC2P45880 294 aaPredicted RBP10.24□□□□□ -0.77
CDH3-202ENST00000429102 IBA57Q5T440 356 aaKnown RBP10.24□□□□□ -0.77
CDH3-202ENST00000429102 OR2D3Q8NGH3 330 aa10.24□□□□□ -0.77
CDH3-202ENST00000429102 PPP1R35Q8TAP8 253 aa10.24□□□□□ -0.77
CDH3-202ENST00000429102 C1orf159Q96HA4 380 aa10.24□□□□□ -0.77
CDH3-202ENST00000429102 ZNF331Q9NQX6 463 aaPredicted RBP10.24□□□□□ -0.77
CDH3-202ENST00000429102 MALRD1Q5VYJ5 2156 aa10.24□□□□□ -0.77
CDH3-202ENST00000429102 IGKV1OR2-108A0A075B7D4 117 aa10.24□□□□□ -0.77
CDH3-202ENST00000429102 SNAI2O43623 268 aa10.24□□□□□ -0.77
CDH3-202ENST00000429102 USF1P22415 310 aaPredicted RBP10.24□□□□□ -0.77
CDH3-202ENST00000429102 HSPE1P61604 102 aaKnown RBP10.24□□□□□ -0.77
CDH3-202ENST00000429102 PDLIM4P50479 330 aa10.24□□□□□ -0.77
CDH3-202ENST00000429102 PMCHL2Q9BQD1 86 aa10.24□□□□□ -0.77
CDH3-202ENST00000429102 KMT2EQ8IZD2 1858 aa10.23□□□□□ -0.77
CDH3-202ENST00000429102 TYMSP04818 313 aa10.23□□□□□ -0.77
CDH3-202ENST00000429102 RPL8P62917 257 aaKnown RBP10.23□□□□□ -0.77
CDH3-202ENST00000429102 UNQ5815/PRO19632Q6UWF5 114 aa10.23□□□□□ -0.77
CDH3-202ENST00000429102 ZPBPQ9BS86 351 aa10.23□□□□□ -0.77
CDH3-202ENST00000429102 PROCRQ9UNN8 238 aa10.23□□□□□ -0.77
CDH3-202ENST00000429102 ATRXP46100 2492 aa10.23□□□□□ -0.77
CDH3-202ENST00000429102 MGST3O14880 152 aa10.23□□□□□ -0.77
CDH3-202ENST00000429102 MOSP00540 346 aa10.23□□□□□ -0.77
CDH3-202ENST00000429102 DIAPH2-AS1Q14236 149 aa10.23□□□□□ -0.77
CDH3-202ENST00000429102 TPTE2P1Q5T6R2 138 aa10.23□□□□□ -0.77
CDH3-202ENST00000429102 STUMQ69YW2 141 aa10.23□□□□□ -0.77
CDH3-202ENST00000429102 BEND2Q8NDZ0 799 aa10.23□□□□□ -0.77
CDH3-202ENST00000429102 GSX1Q9H4S2 264 aaPredicted RBP10.23□□□□□ -0.77
CDH3-202ENST00000429102 RALYQ9UKM9 306 aaKnown RBP10.23□□□□□ -0.77
CDH3-202ENST00000429102 AKAP13Q12802 2813 aa10.23□□□□□ -0.77
CDH3-202ENST00000429102 C20orf202A1L168 122 aa10.22□□□□□ -0.77
CDH3-202ENST00000429102 GGTLC3B5MD39 225 aa10.22□□□□□ -0.77
CDH3-202ENST00000429102 DLEU1O43261 78 aa10.22□□□□□ -0.77
CDH3-202ENST00000429102 IGFBPL1Q8WX77 278 aa10.22□□□□□ -0.77
CDH3-202ENST00000429102 RBM14Q96PK6 669 aaKnown RBP10.22□□□□□ -0.77
CDH3-202ENST00000429102 COMMD5Q9GZQ3 224 aa10.22□□□□□ -0.77
CDH3-202ENST00000429102 TRGV10A0A0A0MS01 117 aa10.22□□□□□ -0.77
CDH3-202ENST00000429102 C21orf140B9A014 251 aa10.22□□□□□ -0.77
CDH3-202ENST00000429102 CORTO00230 105 aa10.22□□□□□ -0.77
CDH3-202ENST00000429102 FAM27E3Q08E93 113 aa10.22□□□□□ -0.77
CDH3-202ENST00000429102 EIF4EBP1Q13541 118 aaPredicted RBP10.22□□□□□ -0.77
CDH3-202ENST00000429102 ACSF3Q4G176 576 aaPredicted RBP10.22□□□□□ -0.77
CDH3-202ENST00000429102 LPAR2Q9HBW0 351 aa10.22□□□□□ -0.77
CDH3-202ENST00000429102 IL19Q9UHD0 177 aa10.22□□□□□ -0.77
CDH3-202ENST00000429102 OTOGLQ3ZCN5 2332 aa10.22□□□□□ -0.77
CDH3-202ENST00000429102 DSCAMO60469 2012 aa10.22□□□□□ -0.77
CDH3-202ENST00000429102 BRS3P32247 399 aa10.22□□□□□ -0.77
CDH3-202ENST00000429102 CCL17Q92583 94 aa10.22□□□□□ -0.77
CDH3-202ENST00000429102 NPIPB3Q92617 1050 aa10.22□□□□□ -0.77
CDH3-202ENST00000429102 PARD6GQ9BYG4 376 aaPredicted RBP10.22□□□□□ -0.77
CDH3-202ENST00000429102 HES4Q9HCC6 221 aa10.22□□□□□ -0.77
CDH3-202ENST00000429102 IDI2-AS1Q9NZ38 188 aa10.22□□□□□ -0.77
CDH3-202ENST00000429102 E7EUB6 86 aa10.21□□□□□ -0.77
CDH3-202ENST00000429102 LINC00869P0C866 280 aa10.21□□□□□ -0.77
CDH3-202ENST00000429102 LBHQ53QV2 105 aaPredicted RBP10.21□□□□□ -0.77
CDH3-202ENST00000429102 HARBI1Q96MB7 349 aa10.21□□□□□ -0.77
CDH3-202ENST00000429102 CLEC5AQ9NY25 188 aa10.21□□□□□ -0.77
CDH3-202ENST00000429102 CD59P13987 128 aa10.21□□□□□ -0.77
CDH3-202ENST00000429102 LOXL3P58215 753 aa10.21□□□□□ -0.77
CDH3-202ENST00000429102 BHLHA15Q7RTS1 189 aaPredicted RBP10.21□□□□□ -0.77
CDH3-202ENST00000429102 RBMXL3Q8N7X1 1067 aaKnown RBP10.21□□□□□ -0.77
CDH3-202ENST00000429102 MIEN1Q9BRT3 115 aa10.21□□□□□ -0.77
CDH3-202ENST00000429102 V9GYV3 84 aa10.21□□□□□ -0.77
CDH3-202ENST00000429102 C15orf61A6NNL5 157 aa10.21□□□□□ -0.78
CDH3-202ENST00000429102 ZNF138P52744 262 aa10.21□□□□□ -0.78
CDH3-202ENST00000429102 KLF3P57682 345 aaPredicted RBP10.21□□□□□ -0.78
CDH3-202ENST00000429102 RPL19P84098 196 aaKnown RBP10.21□□□□□ -0.78
CDH3-202ENST00000429102 SLAQ13239 276 aa10.21□□□□□ -0.78
CDH3-202ENST00000429102 C22orf34Q6ZV56 151 aa10.21□□□□□ -0.78
CDH3-202ENST00000429102 TCF24Q7RTU0 167 aa10.21□□□□□ -0.78
CDH3-202ENST00000429102 FAM90A1Q86YD7 464 aa10.21□□□□□ -0.78
CDH3-202ENST00000429102 M0R2Z0 102 aa10.2□□□□□ -0.78
CDH3-202ENST00000429102 APCSP02743 223 aa10.2□□□□□ -0.78
CDH3-202ENST00000429102 RAB4AP20338 218 aa10.2□□□□□ -0.78
CDH3-202ENST00000429102 TNFAIP6P98066 277 aaPredicted RBP10.2□□□□□ -0.78
CDH3-202ENST00000429102 VWC2Q2TAL6 325 aa10.2□□□□□ -0.78
CDH3-202ENST00000429102 DEFB124Q8NES8 71 aa10.2□□□□□ -0.78
CDH3-202ENST00000429102 CBY1Q9Y3M2 126 aa10.2□□□□□ -0.78
CDH3-202ENST00000429102 CDX4O14627 284 aaPredicted RBP10.2□□□□□ -0.78
CDH3-202ENST00000429102 COX7A2P2O60397 106 aa10.2□□□□□ -0.78
CDH3-202ENST00000429102 MPDU1O75352 247 aa10.2□□□□□ -0.78
CDH3-202ENST00000429102 OR1B1Q8NGR6 318 aa10.2□□□□□ -0.78
CDH3-202ENST00000429102 OR5B3Q8NH48 314 aa10.2□□□□□ -0.78
CDH3-202ENST00000429102 SPRY4Q9C004 299 aa10.2□□□□□ -0.78
CDH3-202ENST00000429102 SLC45A2Q9UMX9 530 aa10.2□□□□□ -0.78
CDH3-202ENST00000429102 A0A1W2PS18 150 aa10.2□□□□□ -0.78
CDH3-202ENST00000429102 IGKV3-15P01624 115 aa10.2□□□□□ -0.78
CDH3-202ENST00000429102 GPX1P07203 203 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms