RNA–Protein interactions for RNA: ENST00000428659.1

TIMM9P3-201, Transcript of TIMM9 pseudogene 3, humanhuman

BASIC

Gene TIMM9P3, Length 274 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM9P3-201ENST00000428659 LOC110117498A0A087WWA1 95 aa0.4□□□□□ -2.35
TIMM9P3-201ENST00000428659 TRAPPC2LH3BP13 241 aa0.4□□□□□ -2.35
TIMM9P3-201ENST00000428659 C19orf84I3L1E1 186 aa0.4□□□□□ -2.35
TIMM9P3-201ENST00000428659 FADS1O60427 444 aa0.4□□□□□ -2.35
TIMM9P3-201ENST00000428659 OR1I1O60431 355 aa0.4□□□□□ -2.35
TIMM9P3-201ENST00000428659 UBL3O95164 117 aa0.4□□□□□ -2.35
TIMM9P3-201ENST00000428659 CALB1P05937 261 aa0.4□□□□□ -2.35
TIMM9P3-201ENST00000428659 MIFP14174 115 aa0.4□□□□□ -2.35
TIMM9P3-201ENST00000428659 SULT1A1P50225 295 aa0.4□□□□□ -2.35
TIMM9P3-201ENST00000428659 TCL1AP56279 114 aa0.4□□□□□ -2.35
TIMM9P3-201ENST00000428659 SPCS3P61009 180 aa0.4□□□□□ -2.35
TIMM9P3-201ENST00000428659 YPEL3P61236 119 aaPredicted RBP0.4□□□□□ -2.35
TIMM9P3-201ENST00000428659 CTAG1AP78358 180 aa0.4□□□□□ -2.35
TIMM9P3-201ENST00000428659 RHOGP84095 191 aa0.4□□□□□ -2.35
TIMM9P3-201ENST00000428659 COTL1Q14019 142 aa0.4□□□□□ -2.35
TIMM9P3-201ENST00000428659 RHEBQ15382 184 aa0.4□□□□□ -2.35
TIMM9P3-201ENST00000428659 GUK1Q16774 197 aa0.4□□□□□ -2.35
TIMM9P3-201ENST00000428659 SPOPLQ6IQ16 392 aa0.4□□□□□ -2.35
TIMM9P3-201ENST00000428659 BPIFA4PQ86YQ2 179 aa0.4□□□□□ -2.35
TIMM9P3-201ENST00000428659 LINC00311Q8N616 119 aa0.4□□□□□ -2.35
TIMM9P3-201ENST00000428659 Q8N814 137 aa0.4□□□□□ -2.35
TIMM9P3-201ENST00000428659 OR5A1Q8NGJ0 315 aa0.4□□□□□ -2.35
TIMM9P3-201ENST00000428659 PFN4Q8NHR9 129 aa0.4□□□□□ -2.35
TIMM9P3-201ENST00000428659 TEX47Q8TBZ9 253 aa0.4□□□□□ -2.35
TIMM9P3-201ENST00000428659 TMEM147Q9BVK8 224 aa0.4□□□□□ -2.35
TIMM9P3-201ENST00000428659 CCDC90BQ9GZT6 254 aa0.4□□□□□ -2.35
TIMM9P3-201ENST00000428659 KIF24Q5T7B8 1368 aa0.4□□□□□ -2.35
TIMM9P3-201ENST00000428659 MAP3K5Q99683 1374 aa0.4□□□□□ -2.35
TIMM9P3-201ENST00000428659 ARFGEF3Q5TH69 2177 aa0.4□□□□□ -2.35
TIMM9P3-201ENST00000428659 MYH11P35749 1972 aa0.39□□□□□ -2.35
TIMM9P3-201ENST00000428659 POLEQ07864 2286 aa0.39□□□□□ -2.35
TIMM9P3-201ENST00000428659 SIPA1L1O43166 1804 aa0.39□□□□□ -2.35
TIMM9P3-201ENST00000428659 PQLC2LA1A4F0 135 aa0.39□□□□□ -2.35
TIMM9P3-201ENST00000428659 C7orf71A4D174 169 aa0.39□□□□□ -2.35
TIMM9P3-201ENST00000428659 DPRXA6NFQ7 191 aa0.39□□□□□ -2.35
TIMM9P3-201ENST00000428659 EEF1E1-BLOC1S5C9J1V9 151 aa0.39□□□□□ -2.35
TIMM9P3-201ENST00000428659 INMT-MINDY4F8WBC2 141 aa0.39□□□□□ -2.35
TIMM9P3-201ENST00000428659 M0R2N4 97 aa0.39□□□□□ -2.35
TIMM9P3-201ENST00000428659 SULT1B1O43704 296 aa0.39□□□□□ -2.35
TIMM9P3-201ENST00000428659 OR2T1O43869 369 aa0.39□□□□□ -2.35
TIMM9P3-201ENST00000428659 CRYZL1O95825 349 aa0.39□□□□□ -2.35
TIMM9P3-201ENST00000428659 HLA-DRB1P01911 266 aa0.39□□□□□ -2.35
TIMM9P3-201ENST00000428659 RNASE3P12724 160 aaKnown RBP0.39□□□□□ -2.35
TIMM9P3-201ENST00000428659 ANP32AP39687 249 aaKnown RBP0.39□□□□□ -2.35
TIMM9P3-201ENST00000428659 CEBPGP53567 150 aa0.39□□□□□ -2.35
TIMM9P3-201ENST00000428659 PDE6HQ13956 83 aa0.39□□□□□ -2.35
TIMM9P3-201ENST00000428659 GDF5OSQ5U4N7 250 aa0.39□□□□□ -2.35
TIMM9P3-201ENST00000428659 CLVS1Q8IUQ0 354 aaPredicted RBP0.39□□□□□ -2.35
TIMM9P3-201ENST00000428659 KRT222Q8N1A0 295 aa0.39□□□□□ -2.35
TIMM9P3-201ENST00000428659 HIST3H2BBQ8N257 126 aa0.39□□□□□ -2.35
TIMM9P3-201ENST00000428659 ANKRD29Q8N6D5 301 aa0.39□□□□□ -2.35
TIMM9P3-201ENST00000428659 C15orf53Q8NAA6 179 aa0.39□□□□□ -2.35
TIMM9P3-201ENST00000428659 SFT2D1Q8WV19 159 aa0.39□□□□□ -2.35
TIMM9P3-201ENST00000428659 SLC35B4Q969S0 331 aa0.39□□□□□ -2.35
TIMM9P3-201ENST00000428659 PTH2Q96A98 100 aa0.39□□□□□ -2.35
TIMM9P3-201ENST00000428659 TOMM6Q96B49 74 aa0.39□□□□□ -2.35
TIMM9P3-201ENST00000428659 NIPSNAP1Q9BPW8 284 aa0.39□□□□□ -2.35
TIMM9P3-201ENST00000428659 CMSS1Q9BQ75 279 aaKnown RBP0.39□□□□□ -2.35
TIMM9P3-201ENST00000428659 OR51I1Q9H343 314 aa0.39□□□□□ -2.35
TIMM9P3-201ENST00000428659 XPNPEP1Q9NQW7 623 aa0.39□□□□□ -2.35
TIMM9P3-201ENST00000428659 FBXL12Q9NXK8 326 aa0.39□□□□□ -2.35
TIMM9P3-201ENST00000428659 VPS29Q9UBQ0 182 aa0.39□□□□□ -2.35
TIMM9P3-201ENST00000428659 TMEM56-RWDD3S4R434 201 aa0.39□□□□□ -2.35
TIMM9P3-201ENST00000428659 PTPRBP23467 1997 aa0.38□□□□□ -2.35
TIMM9P3-201ENST00000428659 GLI3P10071 1580 aa0.38□□□□□ -2.35
TIMM9P3-201ENST00000428659 IGKV1D-42A0A075B6H8 117 aa0.38□□□□□ -2.35
TIMM9P3-201ENST00000428659 EXOC1LA0A1B0GW35 172 aa0.38□□□□□ -2.35
TIMM9P3-201ENST00000428659 EVPLLA8MZ36 301 aa0.38□□□□□ -2.35
TIMM9P3-201ENST00000428659 FAAHO00519 579 aa0.38□□□□□ -2.35
TIMM9P3-201ENST00000428659 PIRO00625 290 aa0.38□□□□□ -2.35
TIMM9P3-201ENST00000428659 TGOLN2O43493 480 aa0.38□□□□□ -2.35
TIMM9P3-201ENST00000428659 CTSDP07339 412 aaPredicted RBP0.38□□□□□ -2.35
TIMM9P3-201ENST00000428659 RBP1P09455 135 aa0.38□□□□□ -2.35
TIMM9P3-201ENST00000428659 HIST1H1EP10412 219 aaKnown RBP0.38□□□□□ -2.35
TIMM9P3-201ENST00000428659 SPI1P17947 270 aa0.38□□□□□ -2.35
TIMM9P3-201ENST00000428659 FKBP2P26885 142 aaKnown RBP0.38□□□□□ -2.35
TIMM9P3-201ENST00000428659 ZNF93P35789 620 aaPredicted RBP0.38□□□□□ -2.35
TIMM9P3-201ENST00000428659 OMPP47874 163 aa0.38□□□□□ -2.35
TIMM9P3-201ENST00000428659 AP3S2P59780 193 aa0.38□□□□□ -2.35
TIMM9P3-201ENST00000428659 SNRPD2P62316 118 aaKnown RBP0.38□□□□□ -2.35
TIMM9P3-201ENST00000428659 SFXN4Q6P4A7 337 aa0.38□□□□□ -2.35
TIMM9P3-201ENST00000428659 Q6ZQT0 140 aa0.38□□□□□ -2.35
TIMM9P3-201ENST00000428659 OR6V1Q8N148 313 aa0.38□□□□□ -2.35
TIMM9P3-201ENST00000428659 SIGLECL1Q8N7X8 197 aa0.38□□□□□ -2.35
TIMM9P3-201ENST00000428659 ZNF418Q8TF45 676 aaPredicted RBP0.38□□□□□ -2.35
TIMM9P3-201ENST00000428659 PATE1Q8WXA2 126 aa0.38□□□□□ -2.35
TIMM9P3-201ENST00000428659 BORCS7Q96B45 105 aa0.38□□□□□ -2.35
TIMM9P3-201ENST00000428659 C20orf27Q9GZN8 174 aa0.38□□□□□ -2.35
TIMM9P3-201ENST00000428659 C6orf62Q9GZU0 229 aaPredicted RBP0.38□□□□□ -2.35
TIMM9P3-201ENST00000428659 OSTCQ9NRP0 149 aa0.38□□□□□ -2.35
TIMM9P3-201ENST00000428659 CISHQ9NSE2 258 aa0.38□□□□□ -2.35
TIMM9P3-201ENST00000428659 EPDR1Q9UM22 224 aa0.38□□□□□ -2.35
TIMM9P3-201ENST00000428659 GUCA1BQ9UMX6 200 aa0.38□□□□□ -2.35
TIMM9P3-201ENST00000428659 HS3ST2Q9Y278 367 aa0.38□□□□□ -2.35
TIMM9P3-201ENST00000428659 ERGIC3Q9Y282 383 aa0.38□□□□□ -2.35
TIMM9P3-201ENST00000428659 ZFP30Q9Y2G7 519 aa0.38□□□□□ -2.35
TIMM9P3-201ENST00000428659 CHD5Q8TDI0 1954 aa0.37□□□□□ -2.35
TIMM9P3-201ENST00000428659 NUP155O75694 1391 aa0.37□□□□□ -2.35
TIMM9P3-201ENST00000428659 A0A1W2PPM0 123 aa0.37□□□□□ -2.35
TIMM9P3-201ENST00000428659 C2orf70A6NJV1 201 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms