RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 MS4A10Q96PG2 267 aa6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 SLC25A31Q9H0C2 315 aa6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 C11orf1Q9H5F2 150 aa6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 C16orf95Q9H693 158 aa6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 JMJD1CQ15652 2540 aa6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 IGLV11-55A0A075B6I3 123 aa6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 RPS10-NUDT3A0A1W2PQS6 291 aa6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 H3BUA1 57 aa6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 OR2J3O76001 311 aa6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 SCAF4O95104 1147 aaKnown RBP6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 HKR1P10072 659 aa6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 LYL1P12980 280 aa6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 MDKP21741 143 aaPredicted RBP6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 PPIFP30405 207 aaKnown RBP6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 SULT1A1P50225 295 aa6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 AP2S1P53680 142 aaPredicted RBP6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 MFAP2P55001 183 aa6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 HBG1P69891 147 aa6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 HBG2P69892 147 aa6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 BAXQ07812 192 aa6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 CLINT1Q14677 625 aa6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 C2orf83Q53S99 150 aa6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 KHDC1LQ5JSQ8 128 aa6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 TEX38Q6PEX7 206 aa6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 C10orf99Q6UWK7 81 aa6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 TMEM14EPQ6UXP3 125 aa6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 LCNL1Q6ZST4 164 aa6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 ACOT7LQ6ZUV0 252 aa6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 SLC16A13Q7RTY0 426 aa6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 LILRB2Q8N423 598 aa6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 TMEM252Q8N6L7 170 aa6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 OR4X2Q8NGF9 303 aa6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 RNASEH2CQ8TDP1 164 aaKnown RBP6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 MFFQ9GZY8 342 aa6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 THYN1Q9P016 225 aa6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 FBXL7Q9UJT9 491 aa6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 TNFSF18Q9UNG2 199 aa6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 RNF114Q9Y508 228 aa6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 DMRT1Q9Y5R6 373 aa6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 SVEP1Q4LDE5 3571 aa6.19□□□□□ -1.42
HMGA1P4-201ENST00000428643 FBN3Q75N90 2809 aa6.18□□□□□ -1.42
HMGA1P4-201ENST00000428643 IGHV3-21A0A0B4J1V1 117 aa6.18□□□□□ -1.42
HMGA1P4-201ENST00000428643 SMCO3A2RU48 225 aa6.18□□□□□ -1.42
HMGA1P4-201ENST00000428643 CLPSL1A2RUU4 121 aa6.18□□□□□ -1.42
HMGA1P4-201ENST00000428643 FAM223BA6NKX1 122 aa6.18□□□□□ -1.42
HMGA1P4-201ENST00000428643 BOLA2-SMG1P6H3BVE0 249 aa6.18□□□□□ -1.42
HMGA1P4-201ENST00000428643 MT-CO2P00403 227 aa6.18□□□□□ -1.42
HMGA1P4-201ENST00000428643 IGLV1-40P01703 118 aa6.18□□□□□ -1.42
HMGA1P4-201ENST00000428643 IGHV3-48P01763 117 aa6.18□□□□□ -1.42
HMGA1P4-201ENST00000428643 IGHG4P01861 327 aa6.18□□□□□ -1.42
HMGA1P4-201ENST00000428643 HNRNPCP07910 306 aaKnown RBP eCLIP6.18□□□□□ -1.42
HMGA1P4-201ENST00000428643 AKR1C1Q04828 323 aa6.18□□□□□ -1.42
HMGA1P4-201ENST00000428643 SLC38A11Q08AI6 406 aa6.18□□□□□ -1.42
HMGA1P4-201ENST00000428643 FOXE3Q13461 319 aa6.18□□□□□ -1.42
HMGA1P4-201ENST00000428643 EXOSC2Q13868 293 aaKnown RBP6.18□□□□□ -1.42
HMGA1P4-201ENST00000428643 C15orf32Q32M92 178 aa6.18□□□□□ -1.42
HMGA1P4-201ENST00000428643 HAPLN4Q86UW8 402 aa6.18□□□□□ -1.42
HMGA1P4-201ENST00000428643 PRIMA1Q86XR5 153 aa6.18□□□□□ -1.42
HMGA1P4-201ENST00000428643 FAM223AQ8IWN6 122 aa6.18□□□□□ -1.42
HMGA1P4-201ENST00000428643 COMMD1Q8N668 190 aa6.18□□□□□ -1.42
HMGA1P4-201ENST00000428643 NECAP1Q8NC96 275 aa6.18□□□□□ -1.42
HMGA1P4-201ENST00000428643 OR5AU1Q8NGC0 362 aa6.18□□□□□ -1.42
HMGA1P4-201ENST00000428643 OR11H4Q8NGC9 324 aa6.18□□□□□ -1.42
HMGA1P4-201ENST00000428643 OR10P1Q8NGE3 313 aa6.18□□□□□ -1.42
HMGA1P4-201ENST00000428643 OR1S2Q8NGQ3 325 aa6.18□□□□□ -1.42
HMGA1P4-201ENST00000428643 SLC35E1Q96K37 410 aa6.18□□□□□ -1.42
HMGA1P4-201ENST00000428643 HYLS1Q96M11 299 aa6.18□□□□□ -1.42
HMGA1P4-201ENST00000428643 FANCD2OSQ96PS1 177 aa6.18□□□□□ -1.42
HMGA1P4-201ENST00000428643 AQP10Q96PS8 301 aa6.18□□□□□ -1.42
HMGA1P4-201ENST00000428643 SMIM3Q9BZL3 60 aa6.18□□□□□ -1.42
HMGA1P4-201ENST00000428643 SLA2Q9H6Q3 261 aa6.18□□□□□ -1.42
HMGA1P4-201ENST00000428643 HSPB11Q9Y547 144 aa6.18□□□□□ -1.42
HMGA1P4-201ENST00000428643 S4R3C0 116 aa6.18□□□□□ -1.42
HMGA1P4-201ENST00000428643 UBE2L5PA0A1B0GUS4 154 aa6.17□□□□□ -1.42
HMGA1P4-201ENST00000428643 TMEM89A2RUT3 159 aa6.17□□□□□ -1.42
HMGA1P4-201ENST00000428643 RNF222A6NCQ9 220 aa6.17□□□□□ -1.42
HMGA1P4-201ENST00000428643 MFSD2BA6NFX1 497 aa6.17□□□□□ -1.42
HMGA1P4-201ENST00000428643 I3L2K1 104 aa6.17□□□□□ -1.42
HMGA1P4-201ENST00000428643 K7EIM0 57 aa6.17□□□□□ -1.42
HMGA1P4-201ENST00000428643 NDUFB8O95169 186 aa6.17□□□□□ -1.42
HMGA1P4-201ENST00000428643 ELANEP08246 267 aa6.17□□□□□ -1.42
HMGA1P4-201ENST00000428643 PSMB8P28062 276 aa6.17□□□□□ -1.42
HMGA1P4-201ENST00000428643 EIF2B2P49770 351 aaKnown RBP6.17□□□□□ -1.42
HMGA1P4-201ENST00000428643 NKX2-5P52952 324 aaPredicted RBP6.17□□□□□ -1.42
HMGA1P4-201ENST00000428643 NHLH2Q02577 135 aa6.17□□□□□ -1.42
HMGA1P4-201ENST00000428643 ATP5G2Q06055 141 aa6.17□□□□□ -1.42
HMGA1P4-201ENST00000428643 CD69Q07108 199 aa6.17□□□□□ -1.42
HMGA1P4-201ENST00000428643 ARL16Q0P5N6 197 aa6.17□□□□□ -1.42
HMGA1P4-201ENST00000428643 FOXL1Q12952 345 aa6.17□□□□□ -1.42
HMGA1P4-201ENST00000428643 KRTAP24-1Q3LI83 254 aa6.17□□□□□ -1.42
HMGA1P4-201ENST00000428643 ETFRF1Q6IPR1 90 aa6.17□□□□□ -1.42
HMGA1P4-201ENST00000428643 ACSM6Q6P461 480 aa6.17□□□□□ -1.42
HMGA1P4-201ENST00000428643 C11orf44Q8N8P7 122 aa6.17□□□□□ -1.42
HMGA1P4-201ENST00000428643 UBAC2Q8NBM4 344 aa6.17□□□□□ -1.42
HMGA1P4-201ENST00000428643 OR5C1Q8NGR4 320 aa6.17□□□□□ -1.42
HMGA1P4-201ENST00000428643 BSCL2Q96G97 398 aaPredicted RBP6.17□□□□□ -1.42
HMGA1P4-201ENST00000428643 ACY3Q96HD9 319 aa6.17□□□□□ -1.42
HMGA1P4-201ENST00000428643 TMEM147Q9BVK8 224 aa6.17□□□□□ -1.42
HMGA1P4-201ENST00000428643 KLK15Q9H2R5 256 aa6.17□□□□□ -1.42
HMGA1P4-201ENST00000428643 C21orf62Q9NYP8 219 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms