RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 OR2Z1Q8NG97 314 aa13.2□□□□□ -0.3
C9orf3-206ENST00000428313 NAA38Q9BRA0 125 aaKnown RBP13.2□□□□□ -0.3
C9orf3-206ENST00000428313 C19orf24Q9BVV8 132 aa13.2□□□□□ -0.3
C9orf3-206ENST00000428313 MPC1Q9Y5U8 109 aa13.2□□□□□ -0.3
C9orf3-206ENST00000428313 SELENOKQ9Y6D0 94 aa13.2□□□□□ -0.3
C9orf3-206ENST00000428313 ABCA7Q8IZY2 2146 aa13.2□□□□□ -0.3
C9orf3-206ENST00000428313 TRGV8A0A0C4DH27 118 aa13.2□□□□□ -0.3
C9orf3-206ENST00000428313 J3QT63 122 aa13.2□□□□□ -0.3
C9orf3-206ENST00000428313 ADH4P08319 380 aa13.2□□□□□ -0.3
C9orf3-206ENST00000428313 DUTP33316 252 aaKnown RBP13.2□□□□□ -0.3
C9orf3-206ENST00000428313 DSCR4P56555 118 aaPredicted RBP13.2□□□□□ -0.3
C9orf3-206ENST00000428313 ADTRPQ96IZ2 230 aa13.2□□□□□ -0.3
C9orf3-206ENST00000428313 NDFIP1Q9BT67 221 aa13.2□□□□□ -0.3
C9orf3-206ENST00000428313 A1L4Q6 167 aa13.19□□□□□ -0.3
C9orf3-206ENST00000428313 ACTL6BO94805 426 aa13.19□□□□□ -0.3
C9orf3-206ENST00000428313 RAC3P60763 192 aa13.19□□□□□ -0.3
C9orf3-206ENST00000428313 ZNF788Q6ZQV5 615 aa13.19□□□□□ -0.3
C9orf3-206ENST00000428313 HILPDAQ9Y5L2 63 aa13.19□□□□□ -0.3
C9orf3-206ENST00000428313 EML6Q6ZMW3 1958 aa13.19□□□□□ -0.3
C9orf3-206ENST00000428313 ZNF716A6NP11 495 aa13.19□□□□□ -0.3
C9orf3-206ENST00000428313 LINC00473A8K010 186 aa13.19□□□□□ -0.3
C9orf3-206ENST00000428313 C2CD4DB7Z1M9 353 aa13.19□□□□□ -0.3
C9orf3-206ENST00000428313 SNAI2O43623 268 aa13.19□□□□□ -0.3
C9orf3-206ENST00000428313 SAMD5Q5TGI4 173 aa13.19□□□□□ -0.3
C9orf3-206ENST00000428313 PRAMEF5Q5TYX0 476 aa13.19□□□□□ -0.3
C9orf3-206ENST00000428313 PRAMEF6Q5VXH4 476 aa13.19□□□□□ -0.3
C9orf3-206ENST00000428313 ADAMTSL5Q6ZMM2 481 aa13.19□□□□□ -0.3
C9orf3-206ENST00000428313 Q8IYB0 196 aa13.19□□□□□ -0.3
C9orf3-206ENST00000428313 NABP2Q9BQ15 211 aa13.19□□□□□ -0.3
C9orf3-206ENST00000428313 COL25A1Q9BXS0 654 aaPredicted RBP13.19□□□□□ -0.3
C9orf3-206ENST00000428313 LAMA3Q16787 3333 aa13.18□□□□□ -0.3
C9orf3-206ENST00000428313 VWC2LB2RUY7 222 aa13.18□□□□□ -0.3
C9orf3-206ENST00000428313 GABRG2P18507 467 aa13.18□□□□□ -0.3
C9orf3-206ENST00000428313 FOXA3P55318 350 aaPredicted RBP13.18□□□□□ -0.3
C9orf3-206ENST00000428313 TRAT1Q6PIZ9 186 aa13.18□□□□□ -0.3
C9orf3-206ENST00000428313 SERTM2A0A1B0GWG4 89 aa13.18□□□□□ -0.3
C9orf3-206ENST00000428313 K7EQM0 130 aa13.18□□□□□ -0.3
C9orf3-206ENST00000428313 SMAD7O15105 426 aaKnown RBP13.18□□□□□ -0.3
C9orf3-206ENST00000428313 LIFP15018 202 aa13.18□□□□□ -0.3
C9orf3-206ENST00000428313 GUSBP1Q15486 140 aa13.18□□□□□ -0.3
C9orf3-206ENST00000428313 Q6ZR03 302 aa13.18□□□□□ -0.3
C9orf3-206ENST00000428313 RAB37Q96AX2 223 aa13.18□□□□□ -0.3
C9orf3-206ENST00000428313 LINC00470Q9BZP3 86 aa13.18□□□□□ -0.3
C9orf3-206ENST00000428313 SIGLEC8Q9NYZ4 499 aa13.18□□□□□ -0.3
C9orf3-206ENST00000428313 IGFBP2P18065 325 aa13.17□□□□□ -0.3
C9orf3-206ENST00000428313 AESQ08117 197 aa13.17□□□□□ -0.3
C9orf3-206ENST00000428313 ABHD12Q8N2K0 398 aa13.17□□□□□ -0.3
C9orf3-206ENST00000428313 MCRIP2Q9BUT9 160 aaKnown RBP13.17□□□□□ -0.3
C9orf3-206ENST00000428313 C7orf69Q9H7B7 122 aa13.17□□□□□ -0.3
C9orf3-206ENST00000428313 MYO9BQ13459 2157 aa13.17□□□□□ -0.3
C9orf3-206ENST00000428313 TMEM30CPA0ZSE6 113 aa13.16□□□□□ -0.3
C9orf3-206ENST00000428313 C12orf77C9JDV5 145 aa13.16□□□□□ -0.3
C9orf3-206ENST00000428313 COL8A2P25067 703 aa13.16□□□□□ -0.3
C9orf3-206ENST00000428313 VEGFBP49765 207 aa13.16□□□□□ -0.3
C9orf3-206ENST00000428313 DUSP23Q9BVJ7 150 aa13.16□□□□□ -0.3
C9orf3-206ENST00000428313 SPANXB1Q9NS25 103 aaPredicted RBP13.16□□□□□ -0.3
C9orf3-206ENST00000428313 ESPL1Q14674 2120 aa13.16□□□□□ -0.3
C9orf3-206ENST00000428313 OOEPA6NGQ2 149 aa13.16□□□□□ -0.3
C9orf3-206ENST00000428313 NGFP01138 241 aa13.16□□□□□ -0.3
C9orf3-206ENST00000428313 CT83Q5H943 113 aa13.16□□□□□ -0.3
C9orf3-206ENST00000428313 BLNKQ8WV28 456 aa13.16□□□□□ -0.3
C9orf3-206ENST00000428313 VGLL1Q99990 258 aa13.16□□□□□ -0.3
C9orf3-206ENST00000428313 ZNF747Q9BV97 191 aa13.16□□□□□ -0.3
C9orf3-206ENST00000428313 GEMIN7Q9H840 131 aaKnown RBP13.16□□□□□ -0.3
C9orf3-206ENST00000428313 R4GN57 208 aa13.16□□□□□ -0.3
C9orf3-206ENST00000428313 F8W1H4 67 aa13.15□□□□□ -0.3
C9orf3-206ENST00000428313 H0Y8G0 127 aa13.15□□□□□ -0.3
C9orf3-206ENST00000428313 IGHV3-7P01780 117 aa13.15□□□□□ -0.3
C9orf3-206ENST00000428313 SP1P08047 785 aa13.15□□□□□ -0.3
C9orf3-206ENST00000428313 SMIM13P0DJ93 91 aa13.15□□□□□ -0.3
C9orf3-206ENST00000428313 CCNOP22674 350 aa13.15□□□□□ -0.3
C9orf3-206ENST00000428313 ABHD17AQ96GS6 310 aa13.15□□□□□ -0.3
C9orf3-206ENST00000428313 DEFB126Q9BYW3 111 aa13.15□□□□□ -0.3
C9orf3-206ENST00000428313 UNC13CQ8NB66 2214 aa13.15□□□□□ -0.3
C9orf3-206ENST00000428313 C3orf80F5H4A9 247 aa13.15□□□□□ -0.3
C9orf3-206ENST00000428313 C8orf88P0DMB2 117 aa13.15□□□□□ -0.3
C9orf3-206ENST00000428313 PTPRBP23467 1997 aa13.15□□□□□ -0.3
C9orf3-206ENST00000428313 GPR12P47775 334 aa13.15□□□□□ -0.3
C9orf3-206ENST00000428313 ERVK11-1P61568 191 aa13.15□□□□□ -0.3
C9orf3-206ENST00000428313 ZNF146Q15072 292 aa13.15□□□□□ -0.3
C9orf3-206ENST00000428313 UNC80Q8N2C7 3258 aa13.15□□□□□ -0.3
C9orf3-206ENST00000428313 TCF19Q9Y242 345 aa13.15□□□□□ -0.3
C9orf3-206ENST00000428313 AMMECR1Q9Y4X0 333 aaPredicted RBP13.15□□□□□ -0.3
C9orf3-206ENST00000428313 SPAARA0A1B0GVQ0 90 aa13.14□□□□□ -0.31
C9orf3-206ENST00000428313 C5orf49A4QMS7 147 aa13.14□□□□□ -0.31
C9orf3-206ENST00000428313 PLGLB1Q02325 96 aa13.14□□□□□ -0.31
C9orf3-206ENST00000428313 TMEM164Q5U3C3 297 aa13.14□□□□□ -0.31
C9orf3-206ENST00000428313 DHRS13Q6UX07 377 aa13.14□□□□□ -0.31
C9orf3-206ENST00000428313 PLXDC1Q8IUK5 500 aa13.14□□□□□ -0.31
C9orf3-206ENST00000428313 GCSAMQ8N6F7 178 aa13.14□□□□□ -0.31
C9orf3-206ENST00000428313 MRPL32Q9BYC8 188 aaKnown RBP13.14□□□□□ -0.31
C9orf3-206ENST00000428313 FGF21Q9NSA1 209 aa13.14□□□□□ -0.31
C9orf3-206ENST00000428313 BOKQ9UMX3 212 aaPredicted RBP13.14□□□□□ -0.31
C9orf3-206ENST00000428313 CEP192Q8TEP8 1941 aa13.14□□□□□ -0.31
C9orf3-206ENST00000428313 HCFC1P51610 2035 aa13.14□□□□□ -0.31
C9orf3-206ENST00000428313 TET2Q6N021 2002 aaPredicted RBP13.14□□□□□ -0.31
C9orf3-206ENST00000428313 TEX50A0A1B0GTY4 177 aa13.14□□□□□ -0.31
C9orf3-206ENST00000428313 TSPAN13O95857 204 aa13.14□□□□□ -0.31
C9orf3-206ENST00000428313 ERVK-16P61578 105 aa13.14□□□□□ -0.31
C9orf3-206ENST00000428313 NEU4Q8WWR8 484 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms