RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 IZUMO1RA6ND01 250 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 FAM181BA6NEQ2 426 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 TNFRSF13BO14836 293 aaPredicted RBP4.23□□□□□ -1.73
RIF1-203ENST00000428287 ZG16O60844 167 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 TFF2Q03403 129 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 RPP25Q9BUL9 199 aaKnown RBP4.23□□□□□ -1.73
RIF1-203ENST00000428287 SCRT2Q9NQ03 307 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 YTHDF2Q9Y5A9 579 aaKnown RBP4.23□□□□□ -1.73
RIF1-203ENST00000428287 TRGV8A0A0C4DH27 118 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 OR2T8A6NH00 312 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 A6NJY4 79 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 MT-CO2P00403 227 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 LIPFP07098 398 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 LIFP15018 202 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 MRPL49Q13405 166 aaKnown RBP4.23□□□□□ -1.73
RIF1-203ENST00000428287 FAM214BQ7L5A3 538 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 OR2H1Q9GZK4 316 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 TNFSF12O43508 249 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 SAP30O75446 220 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 CA3P07451 260 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 MAJINQ3KP22 176 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 SOHLH2Q9NX45 425 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 LOXL2Q9Y4K0 774 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 RBM7Q9Y580 266 aaKnown RBP4.22□□□□□ -1.73
RIF1-203ENST00000428287 OR4C46A6NHA9 309 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 H3BRM9 83 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 CELA3BP08861 270 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 ZNF645Q8N7E2 425 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 CLUHP3Q96NS8 147 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 RNASE7Q9H1E1 156 aaKnown RBP4.22□□□□□ -1.73
RIF1-203ENST00000428287 A0A1W2PR77 199 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 OR52L2PQ8NGH6 319 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 FGFBP3Q8TAT2 258 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 OR1A1Q9P1Q5 309 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 NOTCH1P46531 2555 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 TRAPPC2LH3BP13 241 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 GPR6P46095 362 aaPredicted RBP4.22□□□□□ -1.73
RIF1-203ENST00000428287 DSCR4P56555 118 aaPredicted RBP4.22□□□□□ -1.73
RIF1-203ENST00000428287 RTL8BQ17RB0 113 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 PLA2G2FQ9BZM2 168 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 C9orf118A6NHY6 69 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 J3QT63 122 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 M0R1X1 148 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 DUTP33316 252 aaKnown RBP4.22□□□□□ -1.73
RIF1-203ENST00000428287 HSD52Q0P140 79 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 VHLLQ6RSH7 139 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 OR1N2Q8NGR9 330 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 PMCHL2Q9BQD1 86 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 SLC25A33Q9BSK2 321 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 SOX21Q9Y651 276 aaPredicted RBP4.22□□□□□ -1.73
RIF1-203ENST00000428287 C7orf71A4D174 169 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 SIVA1O15304 175 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 CFHR2P36980 270 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 GNG4P50150 75 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 B3GALT5-AS1P59052 145 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 TMEM164Q5U3C3 297 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 DOLPP1Q86YN1 238 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 UBALD2Q8IYN6 164 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 NUP35Q8NFH5 326 aa4.22□□□□□ -1.73
RIF1-203ENST00000428287 PDZD2O15018 2839 aa4.21□□□□□ -1.73
RIF1-203ENST00000428287 MGST3O14880 152 aa4.21□□□□□ -1.73
RIF1-203ENST00000428287 FSTL3O95633 263 aa4.21□□□□□ -1.73
RIF1-203ENST00000428287 FOXF2Q12947 444 aa4.21□□□□□ -1.73
RIF1-203ENST00000428287 CEACAM16Q2WEN9 425 aa4.21□□□□□ -1.73
RIF1-203ENST00000428287 IBA57Q5T440 356 aaKnown RBP4.21□□□□□ -1.73
RIF1-203ENST00000428287 ABHD17BQ5VST6 288 aa4.21□□□□□ -1.73
RIF1-203ENST00000428287 ZDHHC16Q969W1 377 aa4.21□□□□□ -1.73
RIF1-203ENST00000428287 IGF2BP2-AS1Q96M15 143 aa4.21□□□□□ -1.73
RIF1-203ENST00000428287 C17orf98A8MV24 154 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 NPIPA3F8WFD2 350 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 RPEL1Q2QD12 228 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 TEPPQ6URK8 271 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 ATOH7Q8N100 152 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 OR2Z1Q8NG97 314 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 TMEM190Q8WZ59 177 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 DEFB118Q96PH6 123 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 FOXB1Q99853 325 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 KLRF1Q9NZS2 232 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 INS-IGF2F8WCM5 200 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 LEPROTL1O95214 131 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 CGB3P0DN86 165 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 CGB7P0DN87 165 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 FBLP22087 321 aaKnown RBP4.21□□□□□ -1.74
RIF1-203ENST00000428287 SRSF6Q13247 344 aaKnown RBP4.21□□□□□ -1.74
RIF1-203ENST00000428287 TMEM186Q96B77 213 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 IDI2-AS1Q9NZ38 188 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 WNT16Q9UBV4 365 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 OR7C2O60412 319 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 PSPNO60542 156 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 APOHP02749 345 aaPredicted RBP4.21□□□□□ -1.74
RIF1-203ENST00000428287 CATR1Q13166 79 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 GATD1Q8NB37 220 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 Q8TCH9 128 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 GALMQ96C23 342 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 TRIB1Q96RU8 372 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 CRIM1Q9NZV1 1036 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 HIGD1CA8MV81 97 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 MYCNOSP40205 109 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 ETFRF1Q6IPR1 90 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 MRPL14Q6P1L8 145 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms