RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 RRNAD1Q96FB5 475 aaKnown RBP6.97□□□□□ -1.29
RFX3-AS1-202ENST00000427722 THAP7Q9BT49 309 aaPredicted RBP6.97□□□□□ -1.29
RFX3-AS1-202ENST00000427722 PDCD10Q9BUL8 212 aa6.97□□□□□ -1.29
RFX3-AS1-202ENST00000427722 NXF2Q9GZY0 626 aaKnown RBP6.97□□□□□ -1.29
RFX3-AS1-202ENST00000427722 C5orf66Q9H5L9 145 aa6.97□□□□□ -1.29
RFX3-AS1-202ENST00000427722 NAA60Q9H7X0 242 aa6.97□□□□□ -1.29
RFX3-AS1-202ENST00000427722 U3KQE9 123 aa6.97□□□□□ -1.29
RFX3-AS1-202ENST00000427722 A0A0B4J293 547 aa6.96□□□□□ -1.3
RFX3-AS1-202ENST00000427722 ST8SIA3O43173 380 aa6.96□□□□□ -1.3
RFX3-AS1-202ENST00000427722 B3GALNT1O75752 331 aa6.96□□□□□ -1.3
RFX3-AS1-202ENST00000427722 IFNA17P01571 189 aa6.96□□□□□ -1.3
RFX3-AS1-202ENST00000427722 CBLN1P23435 193 aa6.96□□□□□ -1.3
RFX3-AS1-202ENST00000427722 CD81P60033 236 aa6.96□□□□□ -1.3
RFX3-AS1-202ENST00000427722 DEFB114Q30KQ6 69 aa6.96□□□□□ -1.3
RFX3-AS1-202ENST00000427722 PYDC2Q56P42 97 aa6.96□□□□□ -1.3
RFX3-AS1-202ENST00000427722 BTNL8Q6UX41 500 aa6.96□□□□□ -1.3
RFX3-AS1-202ENST00000427722 UXS1Q8NBZ7 420 aa6.96□□□□□ -1.3
RFX3-AS1-202ENST00000427722 ZNF114Q8NC26 417 aa6.96□□□□□ -1.3
RFX3-AS1-202ENST00000427722 OR1L6Q8NGR2 347 aa6.96□□□□□ -1.3
RFX3-AS1-202ENST00000427722 TMEM190Q8WZ59 177 aa6.96□□□□□ -1.3
RFX3-AS1-202ENST00000427722 TRIM63Q969Q1 353 aa6.96□□□□□ -1.3
RFX3-AS1-202ENST00000427722 PINX1Q96BK5 328 aaKnown RBP6.96□□□□□ -1.3
RFX3-AS1-202ENST00000427722 BSCL2Q96G97 398 aaPredicted RBP6.96□□□□□ -1.3
RFX3-AS1-202ENST00000427722 WWC2-AS2Q96NR7 200 aa6.96□□□□□ -1.3
RFX3-AS1-202ENST00000427722 SOSTQ9BQB4 213 aa6.96□□□□□ -1.3
RFX3-AS1-202ENST00000427722 RTBDNQ9BSG5 229 aaPredicted RBP6.96□□□□□ -1.3
RFX3-AS1-202ENST00000427722 C20orf24Q9BUV8 137 aa6.96□□□□□ -1.3
RFX3-AS1-202ENST00000427722 TMEM222Q9H0R3 208 aa6.96□□□□□ -1.3
RFX3-AS1-202ENST00000427722 RBM38Q9H0Z9 239 aaKnown RBP6.96□□□□□ -1.3
RFX3-AS1-202ENST00000427722 PALMDQ9NP74 551 aa6.96□□□□□ -1.3
RFX3-AS1-202ENST00000427722 SLC2A8Q9NY64 477 aa6.96□□□□□ -1.3
RFX3-AS1-202ENST00000427722 TECRQ9NZ01 308 aaKnown RBP6.96□□□□□ -1.3
RFX3-AS1-202ENST00000427722 MLXQ9UH92 298 aa6.96□□□□□ -1.3
RFX3-AS1-202ENST00000427722 UFC1Q9Y3C8 167 aa6.96□□□□□ -1.3
RFX3-AS1-202ENST00000427722 V9GYH0 126 aa6.96□□□□□ -1.3
RFX3-AS1-202ENST00000427722 IGHV3OR16-8A0A075B7F1 116 aa6.95□□□□□ -1.3
RFX3-AS1-202ENST00000427722 CRYM-AS1A6NIL9 109 aa6.95□□□□□ -1.3
RFX3-AS1-202ENST00000427722 SCAF4O95104 1147 aaKnown RBP6.95□□□□□ -1.3
RFX3-AS1-202ENST00000427722 MT-CO2P00403 227 aa6.95□□□□□ -1.3
RFX3-AS1-202ENST00000427722 IGHV3-48P01763 117 aa6.95□□□□□ -1.3
RFX3-AS1-202ENST00000427722 S100A5P33763 92 aa6.95□□□□□ -1.3
RFX3-AS1-202ENST00000427722 ERHP84090 104 aaKnown RBP6.95□□□□□ -1.3
RFX3-AS1-202ENST00000427722 ZNF57Q68EA5 555 aaPredicted RBP6.95□□□□□ -1.3
RFX3-AS1-202ENST00000427722 SPSB3Q6PJ21 355 aa6.95□□□□□ -1.3
RFX3-AS1-202ENST00000427722 TMEM61Q8N0U2 210 aa6.95□□□□□ -1.3
RFX3-AS1-202ENST00000427722 LHFPL5Q8TAF8 219 aa6.95□□□□□ -1.3
RFX3-AS1-202ENST00000427722 RBPMSQ93062 196 aaKnown RBP6.95□□□□□ -1.3
RFX3-AS1-202ENST00000427722 RCHY1Q96PM5 261 aa6.95□□□□□ -1.3
RFX3-AS1-202ENST00000427722 NEURL2Q9BR09 285 aa6.95□□□□□ -1.3
RFX3-AS1-202ENST00000427722 CHRDL1Q9BU40 450 aa6.95□□□□□ -1.3
RFX3-AS1-202ENST00000427722 ZNF436Q9C0F3 470 aaPredicted RBP6.95□□□□□ -1.3
RFX3-AS1-202ENST00000427722 WFDC10AQ9H1F0 79 aa6.95□□□□□ -1.3
RFX3-AS1-202ENST00000427722 TUBA4BQ9H853 241 aa6.95□□□□□ -1.3
RFX3-AS1-202ENST00000427722 ENY2Q9NPA8 101 aa6.95□□□□□ -1.3
RFX3-AS1-202ENST00000427722 PRR13Q9NZ81 148 aa6.95□□□□□ -1.3
RFX3-AS1-202ENST00000427722 CACNG5Q9UF02 275 aa6.95□□□□□ -1.3
RFX3-AS1-202ENST00000427722 SCP2D1Q9UJQ7 156 aa6.95□□□□□ -1.3
RFX3-AS1-202ENST00000427722 DNAH9Q9NYC9 4486 aa6.95□□□□□ -1.3
RFX3-AS1-202ENST00000427722 ZNF785A8K8V0 405 aa6.94□□□□□ -1.3
RFX3-AS1-202ENST00000427722 A8MZ25 164 aa6.94□□□□□ -1.3
RFX3-AS1-202ENST00000427722 I3L2K1 104 aa6.94□□□□□ -1.3
RFX3-AS1-202ENST00000427722 NUPL2O15504 423 aaKnown RBP6.94□□□□□ -1.3
RFX3-AS1-202ENST00000427722 ZNF207O43670 478 aaKnown RBP6.94□□□□□ -1.3
RFX3-AS1-202ENST00000427722 CD7P09564 240 aa6.94□□□□□ -1.3
RFX3-AS1-202ENST00000427722 FAUP35544 74 aaKnown RBP6.94□□□□□ -1.3
RFX3-AS1-202ENST00000427722 SNCAP37840 140 aa6.94□□□□□ -1.3
RFX3-AS1-202ENST00000427722 ETV6P41212 452 aa6.94□□□□□ -1.3
RFX3-AS1-202ENST00000427722 AP3S2P59780 193 aa6.94□□□□□ -1.3
RFX3-AS1-202ENST00000427722 KLF9Q13886 244 aaPredicted RBP6.94□□□□□ -1.3
RFX3-AS1-202ENST00000427722 ZNF79Q15937 498 aa6.94□□□□□ -1.3
RFX3-AS1-202ENST00000427722 TMEM268Q5VZI3 342 aa6.94□□□□□ -1.3
RFX3-AS1-202ENST00000427722 FAM219AQ8IW50 185 aa6.94□□□□□ -1.3
RFX3-AS1-202ENST00000427722 GLYATL2Q8WU03 294 aa6.94□□□□□ -1.3
RFX3-AS1-202ENST00000427722 MARC2Q969Z3 335 aa6.94□□□□□ -1.3
RFX3-AS1-202ENST00000427722 TMEM230Q96A57 120 aa6.94□□□□□ -1.3
RFX3-AS1-202ENST00000427722 ZMAT4Q9H898 229 aa6.94□□□□□ -1.3
RFX3-AS1-202ENST00000427722 DAZ1Q9NQZ3 744 aaKnown RBP6.94□□□□□ -1.3
RFX3-AS1-202ENST00000427722 C19orf73Q9NVV2 129 aa6.94□□□□□ -1.3
RFX3-AS1-202ENST00000427722 GPR132Q9UNW8 380 aa6.94□□□□□ -1.3
RFX3-AS1-202ENST00000427722 ZNF701M0R085 212 aaPredicted RBP6.93□□□□□ -1.3
RFX3-AS1-202ENST00000427722 NDUFA4O00483 81 aa6.93□□□□□ -1.3
RFX3-AS1-202ENST00000427722 GNG7O60262 68 aa6.93□□□□□ -1.3
RFX3-AS1-202ENST00000427722 NXPH3O95157 252 aa6.93□□□□□ -1.3
RFX3-AS1-202ENST00000427722 CDS2O95674 445 aa6.93□□□□□ -1.3
RFX3-AS1-202ENST00000427722 AKR1C4P17516 323 aa6.93□□□□□ -1.3
RFX3-AS1-202ENST00000427722 MFAP4P55083 255 aa6.93□□□□□ -1.3
RFX3-AS1-202ENST00000427722 ELLP55199 621 aaPredicted RBP6.93□□□□□ -1.3
RFX3-AS1-202ENST00000427722 DHODHQ02127 395 aa6.93□□□□□ -1.3
RFX3-AS1-202ENST00000427722 RELQ04864 619 aaPredicted RBP6.93□□□□□ -1.3
RFX3-AS1-202ENST00000427722 Q6ZRM9 215 aa6.93□□□□□ -1.3
RFX3-AS1-202ENST00000427722 TMED4Q7Z7H5 227 aa6.93□□□□□ -1.3
RFX3-AS1-202ENST00000427722 SELENOHQ8IZQ5 122 aaKnown RBP6.93□□□□□ -1.3
RFX3-AS1-202ENST00000427722 TOMM5Q8N4H5 51 aa6.93□□□□□ -1.3
RFX3-AS1-202ENST00000427722 DEFB125Q8N687 156 aa6.93□□□□□ -1.3
RFX3-AS1-202ENST00000427722 SCGB3A2Q96PL1 93 aa6.93□□□□□ -1.3
RFX3-AS1-202ENST00000427722 ATP6V0BQ99437 205 aa6.93□□□□□ -1.3
RFX3-AS1-202ENST00000427722 GAR1Q9NY12 217 aaKnown RBP6.93□□□□□ -1.3
RFX3-AS1-202ENST00000427722 SORL1Q92673 2214 aa6.93□□□□□ -1.3
RFX3-AS1-202ENST00000427722 CEBPZOSA8MTT3 80 aa6.92□□□□□ -1.3
RFX3-AS1-202ENST00000427722 OR11H12B2RN74 326 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms