RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 RELQ04864 619 aaPredicted RBP13.83□□□□□ -0.2
GPC1-205ENST00000427506 LINC00322Q6ZN03 302 aaPredicted RBP13.83□□□□□ -0.2
GPC1-205ENST00000427506 ZNF114Q8NC26 417 aa13.83□□□□□ -0.2
GPC1-205ENST00000427506 ISOC1Q96CN7 298 aa13.83□□□□□ -0.2
GPC1-205ENST00000427506 RBMY1BA6NDE4 496 aaKnown RBP13.82□□□□□ -0.2
GPC1-205ENST00000427506 RBMY1EA6NEQ0 496 aaKnown RBP13.82□□□□□ -0.2
GPC1-205ENST00000427506 H3BMQ9 156 aa13.82□□□□□ -0.2
GPC1-205ENST00000427506 I3L2K1 104 aa13.82□□□□□ -0.2
GPC1-205ENST00000427506 ZNF207O43670 478 aaKnown RBP13.82□□□□□ -0.2
GPC1-205ENST00000427506 IGHV3-48P01763 117 aa13.82□□□□□ -0.2
GPC1-205ENST00000427506 CTSGP08311 255 aa13.82□□□□□ -0.2
GPC1-205ENST00000427506 RBMY1DP0C7P1 496 aaKnown RBP13.82□□□□□ -0.2
GPC1-205ENST00000427506 UCP1P25874 307 aa13.82□□□□□ -0.2
GPC1-205ENST00000427506 SURF2Q15527 256 aaPredicted RBP13.82□□□□□ -0.2
GPC1-205ENST00000427506 LAMTOR1Q6IAA8 161 aa13.82□□□□□ -0.2
GPC1-205ENST00000427506 OR4C16Q8NGL9 310 aa13.82□□□□□ -0.2
GPC1-205ENST00000427506 TXN2Q99757 166 aa13.82□□□□□ -0.2
GPC1-205ENST00000427506 C5orf66Q9H5L9 145 aa13.82□□□□□ -0.2
GPC1-205ENST00000427506 ENY2Q9NPA8 101 aa13.82□□□□□ -0.2
GPC1-205ENST00000427506 RSL24D1Q9UHA3 163 aaKnown RBP13.82□□□□□ -0.2
GPC1-205ENST00000427506 GNG7O60262 68 aa13.81□□□□□ -0.2
GPC1-205ENST00000427506 YIF1AO95070 293 aa13.81□□□□□ -0.2
GPC1-205ENST00000427506 OR5AC1P0C628 307 aa13.81□□□□□ -0.2
GPC1-205ENST00000427506 P0C879 139 aa13.81□□□□□ -0.2
GPC1-205ENST00000427506 ETV6P41212 452 aa13.81□□□□□ -0.2
GPC1-205ENST00000427506 HOXA1P49639 335 aaPredicted RBP13.81□□□□□ -0.2
GPC1-205ENST00000427506 CASC10Q5T4H9 136 aa13.81□□□□□ -0.2
GPC1-205ENST00000427506 MCFD2Q8NI22 146 aa13.81□□□□□ -0.2
GPC1-205ENST00000427506 PRRT1Q99946 306 aa13.81□□□□□ -0.2
GPC1-205ENST00000427506 RTBDNQ9BSG5 229 aaPredicted RBP13.81□□□□□ -0.2
GPC1-205ENST00000427506 SLIRPQ9GZT3 109 aaKnown RBP13.81□□□□□ -0.2
GPC1-205ENST00000427506 TMEM222Q9H0R3 208 aa13.81□□□□□ -0.2
GPC1-205ENST00000427506 NAA60Q9H7X0 242 aa13.81□□□□□ -0.2
GPC1-205ENST00000427506 RETNQ9HD89 108 aa13.81□□□□□ -0.2
GPC1-205ENST00000427506 STAB2Q8WWQ8 2551 aa13.81□□□□□ -0.2
GPC1-205ENST00000427506 FABP12A6NFH5 140 aa13.8□□□□□ -0.2
GPC1-205ENST00000427506 K7EMT4 169 aa13.8□□□□□ -0.2
GPC1-205ENST00000427506 TNFSF8P32971 234 aa13.8□□□□□ -0.2
GPC1-205ENST00000427506 SUB1P53999 127 aaKnown RBP eCLIP13.8□□□□□ -0.2
GPC1-205ENST00000427506 OR51S1Q8NGJ8 323 aa13.8□□□□□ -0.2
GPC1-205ENST00000427506 HIPK2Q9H2X6 1198 aa13.8□□□□□ -0.2
GPC1-205ENST00000427506 A0A0G2JRQ6 117 aa13.79□□□□□ -0.2
GPC1-205ENST00000427506 CCDC160A6NGH7 325 aa13.79□□□□□ -0.2
GPC1-205ENST00000427506 C15orf62A8K5M9 175 aa13.79□□□□□ -0.2
GPC1-205ENST00000427506 GSTZ1O43708 216 aaPredicted RBP13.79□□□□□ -0.2
GPC1-205ENST00000427506 CDS2O95674 445 aa13.79□□□□□ -0.2
GPC1-205ENST00000427506 FCGR2BP31994 310 aaPredicted RBP13.79□□□□□ -0.2
GPC1-205ENST00000427506 DHODHQ02127 395 aa13.79□□□□□ -0.2
GPC1-205ENST00000427506 FAM219AQ8IW50 185 aa13.79□□□□□ -0.2
GPC1-205ENST00000427506 DUSP18Q8NEJ0 188 aa13.79□□□□□ -0.2
GPC1-205ENST00000427506 SPAG8Q99932 426 aaPredicted RBP13.79□□□□□ -0.2
GPC1-205ENST00000427506 FAM110AQ9BQ89 295 aa13.79□□□□□ -0.2
GPC1-205ENST00000427506 EDA2RQ9HAV5 297 aa13.79□□□□□ -0.2
GPC1-205ENST00000427506 MCUBQ9NWR8 336 aa13.79□□□□□ -0.2
GPC1-205ENST00000427506 SCP2D1Q9UJQ7 156 aa13.79□□□□□ -0.2
GPC1-205ENST00000427506 GPR132Q9UNW8 380 aa13.79□□□□□ -0.2
GPC1-205ENST00000427506 ANKRD20A5PA0PJZ0 165 aa13.78□□□□□ -0.2
GPC1-205ENST00000427506 INS-IGF2F8WCM5 200 aa13.78□□□□□ -0.2
GPC1-205ENST00000427506 TSPAN4O14817 238 aa13.78□□□□□ -0.2
GPC1-205ENST00000427506 NPBWR1P48145 328 aa13.78□□□□□ -0.2
GPC1-205ENST00000427506 ZFAND6Q6FIF0 208 aa13.78□□□□□ -0.2
GPC1-205ENST00000427506 GLYATL2Q8WU03 294 aa13.78□□□□□ -0.2
GPC1-205ENST00000427506 RBPMSQ93062 196 aaKnown RBP13.78□□□□□ -0.2
GPC1-205ENST00000427506 NXF2Q9GZY0 626 aaKnown RBP13.78□□□□□ -0.2
GPC1-205ENST00000427506 CRYM-AS1A6NIL9 109 aa13.77□□□□□ -0.21
GPC1-205ENST00000427506 CORTO00230 105 aa13.77□□□□□ -0.21
GPC1-205ENST00000427506 TMEM268Q5VZI3 342 aa13.77□□□□□ -0.21
GPC1-205ENST00000427506 SELENOHQ8IZQ5 122 aaKnown RBP13.77□□□□□ -0.21
GPC1-205ENST00000427506 TMEM116Q8NCL8 245 aa13.77□□□□□ -0.21
GPC1-205ENST00000427506 LHFPL5Q8TAF8 219 aa13.77□□□□□ -0.21
GPC1-205ENST00000427506 SCGB3A2Q96PL1 93 aa13.77□□□□□ -0.21
GPC1-205ENST00000427506 GGTLC1Q9BX51 225 aa13.77□□□□□ -0.21
GPC1-205ENST00000427506 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.77□□□□□ -0.21
GPC1-205ENST00000427506 UBQLN2Q9UHD9 624 aa13.77□□□□□ -0.21
GPC1-205ENST00000427506 SMPXQ9UHP9 88 aa13.77□□□□□ -0.21
GPC1-205ENST00000427506 KCNIP3Q9Y2W7 256 aa13.77□□□□□ -0.21
GPC1-205ENST00000427506 HUWE1Q7Z6Z7 4374 aaKnown RBP13.77□□□□□ -0.21
GPC1-205ENST00000427506 LOC102724200A0A096LPH7 203 aaPredicted RBP13.76□□□□□ -0.21
GPC1-205ENST00000427506 IGHV3-49A0A0A0MS15 119 aa13.76□□□□□ -0.21
GPC1-205ENST00000427506 IGHV7-4-1A0A0J9YVY3 117 aa13.76□□□□□ -0.21
GPC1-205ENST00000427506 OR4C46A6NHA9 309 aa13.76□□□□□ -0.21
GPC1-205ENST00000427506 RNASE2P10153 161 aaKnown RBP13.76□□□□□ -0.21
GPC1-205ENST00000427506 SPCS3P61009 180 aa13.76□□□□□ -0.21
GPC1-205ENST00000427506 Q6ZRM9 215 aa13.76□□□□□ -0.21
GPC1-205ENST00000427506 RHPN1-AS1Q9BWJ2 59 aa13.76□□□□□ -0.21
GPC1-205ENST00000427506 NBEAL2Q6ZNJ1 2754 aa13.75□□□□□ -0.21
GPC1-205ENST00000427506 TRAV14DV4A0A0A6YYC5 116 aa13.75□□□□□ -0.21
GPC1-205ENST00000427506 OPRK1P41145 380 aa13.75□□□□□ -0.21
GPC1-205ENST00000427506 GPR146Q96CH1 333 aa13.75□□□□□ -0.21
GPC1-205ENST00000427506 OR10C1Q96KK4 312 aa13.75□□□□□ -0.21
GPC1-205ENST00000427506 SOSTQ9BQB4 213 aa13.75□□□□□ -0.21
GPC1-205ENST00000427506 GINS3Q9BRX5 216 aa13.75□□□□□ -0.21
GPC1-205ENST00000427506 CACNG5Q9UF02 275 aa13.75□□□□□ -0.21
GPC1-205ENST00000427506 CHEK1O14757 476 aa13.74□□□□□ -0.21
GPC1-205ENST00000427506 PYDC2Q56P42 97 aa13.74□□□□□ -0.21
GPC1-205ENST00000427506 OR52E5Q8NH55 327 aa13.74□□□□□ -0.21
GPC1-205ENST00000427506 ZNF414Q96IQ9 312 aa13.74□□□□□ -0.21
GPC1-205ENST00000427506 RNF2Q99496 336 aa13.74□□□□□ -0.21
GPC1-205ENST00000427506 HEYLQ9NQ87 328 aaPredicted RBP13.74□□□□□ -0.21
GPC1-205ENST00000427506 IGKV3-7A0A075B6H7 116 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms