RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 FOXL1Q12952 345 aa6.94□□□□□ -1.3
SH3D19-204ENST00000427414 TMEM144Q7Z5S9 345 aa6.94□□□□□ -1.3
SH3D19-204ENST00000427414 C11orf42Q8N5U0 333 aa6.94□□□□□ -1.3
SH3D19-204ENST00000427414 RFESDQ8TAC1 157 aa6.94□□□□□ -1.3
SH3D19-204ENST00000427414 VSTM2AQ8TAG5 236 aa6.94□□□□□ -1.3
SH3D19-204ENST00000427414 DNAJC4Q9NNZ3 241 aa6.94□□□□□ -1.3
SH3D19-204ENST00000427414 BET1LQ9NYM9 111 aa6.94□□□□□ -1.3
SH3D19-204ENST00000427414 FOXA2Q9Y261 457 aaPredicted RBP6.94□□□□□ -1.3
SH3D19-204ENST00000427414 SAA2-SAA4A0A096LPE2 208 aa6.94□□□□□ -1.3
SH3D19-204ENST00000427414 PGPEP1LA6NFU8 196 aa6.94□□□□□ -1.3
SH3D19-204ENST00000427414 LINC00473A8K010 186 aa6.94□□□□□ -1.3
SH3D19-204ENST00000427414 M0R1X1 148 aa6.94□□□□□ -1.3
SH3D19-204ENST00000427414 NDUFB4O95168 129 aa6.94□□□□□ -1.3
SH3D19-204ENST00000427414 APOA2P02652 100 aa6.94□□□□□ -1.3
SH3D19-204ENST00000427414 SAA2P0DJI9 122 aaPredicted RBP6.94□□□□□ -1.3
SH3D19-204ENST00000427414 UBE2G2P60604 165 aa6.94□□□□□ -1.3
SH3D19-204ENST00000427414 ZNF816Q0VGE8 651 aaPredicted RBP6.94□□□□□ -1.3
SH3D19-204ENST00000427414 LYPD2Q6UXB3 125 aa6.94□□□□□ -1.3
SH3D19-204ENST00000427414 ZNF709Q8N972 641 aa6.94□□□□□ -1.3
SH3D19-204ENST00000427414 OR5AU1Q8NGC0 362 aa6.94□□□□□ -1.3
SH3D19-204ENST00000427414 PRNDQ9UKY0 176 aa6.94□□□□□ -1.3
SH3D19-204ENST00000427414 ZFP30Q9Y2G7 519 aa6.94□□□□□ -1.3
SH3D19-204ENST00000427414 FCN3O75636 299 aa6.94□□□□□ -1.3
SH3D19-204ENST00000427414 CD99P14209 185 aa6.94□□□□□ -1.3
SH3D19-204ENST00000427414 CRISP2P16562 243 aa6.94□□□□□ -1.3
SH3D19-204ENST00000427414 LGALS7P47929 136 aa6.94□□□□□ -1.3
SH3D19-204ENST00000427414 RPS16P62249 146 aaKnown RBP6.94□□□□□ -1.3
SH3D19-204ENST00000427414 CLEC2AQ6UVW9 174 aa6.94□□□□□ -1.3
SH3D19-204ENST00000427414 TMEM14EPQ6UXP3 125 aa6.94□□□□□ -1.3
SH3D19-204ENST00000427414 ZCCHC24Q8N2G6 241 aaKnown RBP6.94□□□□□ -1.3
SH3D19-204ENST00000427414 ZNF843Q8N446 348 aa6.94□□□□□ -1.3
SH3D19-204ENST00000427414 OR11H6Q8NGC7 330 aa6.94□□□□□ -1.3
SH3D19-204ENST00000427414 DERL1Q9BUN8 251 aa6.94□□□□□ -1.3
SH3D19-204ENST00000427414 SAMD10Q9BYL1 202 aa6.94□□□□□ -1.3
SH3D19-204ENST00000427414 MDFIC2A0A1B0GVS7 189 aa6.93□□□□□ -1.3
SH3D19-204ENST00000427414 SERF1AO75920 110 aa6.93□□□□□ -1.3
SH3D19-204ENST00000427414 TFF1P04155 84 aa6.93□□□□□ -1.3
SH3D19-204ENST00000427414 GNB1P62873 340 aa6.93□□□□□ -1.3
SH3D19-204ENST00000427414 BAGE3Q86Y29 109 aa6.93□□□□□ -1.3
SH3D19-204ENST00000427414 BAGE2Q86Y30 109 aa6.93□□□□□ -1.3
SH3D19-204ENST00000427414 ZNF114Q8NC26 417 aa6.93□□□□□ -1.3
SH3D19-204ENST00000427414 SFRP2Q96HF1 295 aa6.93□□□□□ -1.3
SH3D19-204ENST00000427414 TP53TG3Q9ULZ0 132 aa6.93□□□□□ -1.3
SH3D19-204ENST00000427414 ZFHX4Q86UP3 3567 aa6.93□□□□□ -1.3
SH3D19-204ENST00000427414 IGHV3-43A0A0B4J1X8 118 aa6.93□□□□□ -1.3
SH3D19-204ENST00000427414 PPIAL4CA0A0B4J2A2 164 aa6.93□□□□□ -1.3
SH3D19-204ENST00000427414 J3KRW8 73 aa6.93□□□□□ -1.3
SH3D19-204ENST00000427414 PDE6DO43924 150 aa6.93□□□□□ -1.3
SH3D19-204ENST00000427414 S1PR2O95136 353 aa6.93□□□□□ -1.3
SH3D19-204ENST00000427414 IGLV1-47P01700 117 aa6.93□□□□□ -1.3
SH3D19-204ENST00000427414 IGHV3-43DP0DP04 118 aa6.93□□□□□ -1.3
SH3D19-204ENST00000427414 HNF1AP20823 631 aa6.93□□□□□ -1.3
SH3D19-204ENST00000427414 CBLN1P23435 193 aa6.93□□□□□ -1.3
SH3D19-204ENST00000427414 GPR6P46095 362 aaPredicted RBP6.93□□□□□ -1.3
SH3D19-204ENST00000427414 ATP5G3P48201 142 aa6.93□□□□□ -1.3
SH3D19-204ENST00000427414 YPEL3P61236 119 aaPredicted RBP6.93□□□□□ -1.3
SH3D19-204ENST00000427414 MMDQ15546 238 aa6.93□□□□□ -1.3
SH3D19-204ENST00000427414 VWC2Q2TAL6 325 aa6.93□□□□□ -1.3
SH3D19-204ENST00000427414 PRAMEF5Q5TYX0 476 aa6.93□□□□□ -1.3
SH3D19-204ENST00000427414 DUX4L9Q6RFH8 374 aaPredicted RBP6.93□□□□□ -1.3
SH3D19-204ENST00000427414 OR10P1Q8NGE3 313 aa6.93□□□□□ -1.3
SH3D19-204ENST00000427414 UBALD1Q8TB05 177 aa6.93□□□□□ -1.3
SH3D19-204ENST00000427414 SLC35E1Q96K37 410 aa6.93□□□□□ -1.3
SH3D19-204ENST00000427414 TMEM147Q9BVK8 224 aa6.93□□□□□ -1.3
SH3D19-204ENST00000427414 CLEC7AQ9BXN2 247 aa6.93□□□□□ -1.3
SH3D19-204ENST00000427414 SVILO95425 2214 aa6.92□□□□□ -1.3
SH3D19-204ENST00000427414 F6UZH7 168 aa6.92□□□□□ -1.3
SH3D19-204ENST00000427414 ENSAO43768 121 aaKnown RBP6.92□□□□□ -1.3
SH3D19-204ENST00000427414 KRASP01116 189 aa6.92□□□□□ -1.3
SH3D19-204ENST00000427414 CT45A6P0DMU7 189 aa6.92□□□□□ -1.3
SH3D19-204ENST00000427414 CT45A5P0DMU8 189 aa6.92□□□□□ -1.3
SH3D19-204ENST00000427414 CT45A7P0DMV0 189 aa6.92□□□□□ -1.3
SH3D19-204ENST00000427414 PPIAL4GP0DN37 164 aa6.92□□□□□ -1.3
SH3D19-204ENST00000427414 CDC34P49427 236 aaPredicted RBP6.92□□□□□ -1.3
SH3D19-204ENST00000427414 HOXA4Q00056 320 aaPredicted RBP6.92□□□□□ -1.3
SH3D19-204ENST00000427414 LYG1Q8N1E2 194 aa6.92□□□□□ -1.3
SH3D19-204ENST00000427414 OR5B3Q8NH48 314 aa6.92□□□□□ -1.3
SH3D19-204ENST00000427414 H1FXQ92522 213 aaKnown RBP6.92□□□□□ -1.3
SH3D19-204ENST00000427414 SRSF8Q9BRL6 282 aaKnown RBP6.92□□□□□ -1.3
SH3D19-204ENST00000427414 FAM103A1Q9BTL3 118 aaKnown RBP6.92□□□□□ -1.3
SH3D19-204ENST00000427414 SSBP3Q9BWW4 388 aaPredicted RBP6.92□□□□□ -1.3
SH3D19-204ENST00000427414 NPCDR1Q9BY65 106 aa6.92□□□□□ -1.3
SH3D19-204ENST00000427414 TMEM14BQ9NUH8 114 aa6.92□□□□□ -1.3
SH3D19-204ENST00000427414 ARFGEF3Q5TH69 2177 aa6.92□□□□□ -1.3
SH3D19-204ENST00000427414 C20orf202A1L168 122 aa6.92□□□□□ -1.3
SH3D19-204ENST00000427414 C15orf61A6NNL5 157 aa6.92□□□□□ -1.3
SH3D19-204ENST00000427414 RAMP3O60896 148 aa6.92□□□□□ -1.3
SH3D19-204ENST00000427414 FCGR3BO75015 233 aa6.92□□□□□ -1.3
SH3D19-204ENST00000427414 PRTN3P24158 256 aa6.92□□□□□ -1.3
SH3D19-204ENST00000427414 LINC00310P59036 64 aa6.92□□□□□ -1.3
SH3D19-204ENST00000427414 KRTDAPP60985 99 aa6.92□□□□□ -1.3
SH3D19-204ENST00000427414 ZNF90Q03938 601 aa6.92□□□□□ -1.3
SH3D19-204ENST00000427414 HLA-DRB5Q30154 266 aa6.92□□□□□ -1.3
SH3D19-204ENST00000427414 MINOS1Q5TGZ0 78 aa6.92□□□□□ -1.3
SH3D19-204ENST00000427414 ABHD12Q8N2K0 398 aa6.92□□□□□ -1.3
SH3D19-204ENST00000427414 OR4C13Q8NGP0 309 aa6.92□□□□□ -1.3
SH3D19-204ENST00000427414 SLC35D1Q9NTN3 355 aa6.92□□□□□ -1.3
SH3D19-204ENST00000427414 MINOS1-NBL1R4GNA1 71 aa6.92□□□□□ -1.3
SH3D19-204ENST00000427414 BSNQ9UPA5 3926 aa6.91□□□□□ -1.3
SH3D19-204ENST00000427414 LY6LH3BQJ8 138 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms