RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 PPP5D1E7EU14 171 aa11.39□□□□□ -0.59
TMEM248-204ENST00000424964 CLEC3BP05452 202 aa11.39□□□□□ -0.59
TMEM248-204ENST00000424964 RNASE2P10153 161 aaKnown RBP11.39□□□□□ -0.59
TMEM248-204ENST00000424964 TATDN3Q17R31 274 aa11.39□□□□□ -0.59
TMEM248-204ENST00000424964 PDLIM3Q53GG5 364 aaPredicted RBP11.39□□□□□ -0.59
TMEM248-204ENST00000424964 SAMD5Q5TGI4 173 aa11.39□□□□□ -0.59
TMEM248-204ENST00000424964 DUSP18Q8NEJ0 188 aa11.39□□□□□ -0.59
TMEM248-204ENST00000424964 ZNF431Q8TF32 576 aaPredicted RBP11.39□□□□□ -0.59
TMEM248-204ENST00000424964 MITD1Q8WV92 249 aa11.39□□□□□ -0.59
TMEM248-204ENST00000424964 PINX1Q96BK5 328 aaKnown RBP11.39□□□□□ -0.59
TMEM248-204ENST00000424964 CCDC140Q96MF4 163 aa11.39□□□□□ -0.59
TMEM248-204ENST00000424964 GPR61Q9BZJ8 451 aa11.39□□□□□ -0.59
TMEM248-204ENST00000424964 RBKSQ9H477 322 aa11.39□□□□□ -0.59
TMEM248-204ENST00000424964 HSPB7Q9UBY9 170 aa11.39□□□□□ -0.59
TMEM248-204ENST00000424964 CMYA5Q8N3K9 4069 aa11.39□□□□□ -0.59
TMEM248-204ENST00000424964 K7EIM0 57 aa11.38□□□□□ -0.59
TMEM248-204ENST00000424964 BMPR1BO00238 502 aa11.38□□□□□ -0.59
TMEM248-204ENST00000424964 GGCTO75223 188 aaKnown RBP11.38□□□□□ -0.59
TMEM248-204ENST00000424964 PITX3O75364 302 aa11.38□□□□□ -0.59
TMEM248-204ENST00000424964 ARL3P36405 182 aa11.38□□□□□ -0.59
TMEM248-204ENST00000424964 HTR2BP41595 481 aa11.38□□□□□ -0.59
TMEM248-204ENST00000424964 PLET1Q6UQ28 207 aa11.38□□□□□ -0.59
TMEM248-204ENST00000424964 ZNF502Q8TBZ5 544 aa11.38□□□□□ -0.59
TMEM248-204ENST00000424964 SCARB1Q8WTV0 552 aa11.38□□□□□ -0.59
TMEM248-204ENST00000424964 ZC4H2Q9NQZ6 224 aa11.38□□□□□ -0.59
TMEM248-204ENST00000424964 C21orf62Q9NYP8 219 aa11.38□□□□□ -0.59
TMEM248-204ENST00000424964 MPTX1A8MV57 137 aa11.37□□□□□ -0.59
TMEM248-204ENST00000424964 MT-CO2P00403 227 aa11.37□□□□□ -0.59
TMEM248-204ENST00000424964 IL5P05113 134 aa11.37□□□□□ -0.59
TMEM248-204ENST00000424964 GPR183P32249 361 aa11.37□□□□□ -0.59
TMEM248-204ENST00000424964 SYNJ2BPP57105 145 aa11.37□□□□□ -0.59
TMEM248-204ENST00000424964 KLF5Q13887 457 aaPredicted RBP11.37□□□□□ -0.59
TMEM248-204ENST00000424964 Q56UQ5 140 aa11.37□□□□□ -0.59
TMEM248-204ENST00000424964 C9orf66Q5T8R8 295 aa11.37□□□□□ -0.59
TMEM248-204ENST00000424964 C11orf87Q6NUJ2 197 aa11.37□□□□□ -0.59
TMEM248-204ENST00000424964 C12orf45Q8N5I9 185 aaPredicted RBP11.37□□□□□ -0.59
TMEM248-204ENST00000424964 UBAC2Q8NBM4 344 aa11.37□□□□□ -0.59
TMEM248-204ENST00000424964 DTD1Q8TEA8 209 aa11.37□□□□□ -0.59
TMEM248-204ENST00000424964 OR2T8A6NH00 312 aa11.36□□□□□ -0.59
TMEM248-204ENST00000424964 FAM90A26D6RGX4 464 aa11.36□□□□□ -0.59
TMEM248-204ENST00000424964 INMT-MINDY4F8WBC2 141 aa11.36□□□□□ -0.59
TMEM248-204ENST00000424964 I3L2K1 104 aa11.36□□□□□ -0.59
TMEM248-204ENST00000424964 CORTO00230 105 aa11.36□□□□□ -0.59
TMEM248-204ENST00000424964 MED6O75586 246 aa11.36□□□□□ -0.59
TMEM248-204ENST00000424964 OR2C1O95371 312 aa11.36□□□□□ -0.59
TMEM248-204ENST00000424964 IFNA10P01566 189 aa11.36□□□□□ -0.59
TMEM248-204ENST00000424964 IGHV3-48P01763 117 aa11.36□□□□□ -0.59
TMEM248-204ENST00000424964 MFAP4P55083 255 aa11.36□□□□□ -0.59
TMEM248-204ENST00000424964 NOXA1Q86UR1 476 aa11.36□□□□□ -0.59
TMEM248-204ENST00000424964 SLC24A4Q8NFF2 622 aa11.36□□□□□ -0.59
TMEM248-204ENST00000424964 MAGT1Q9H0U3 335 aa11.36□□□□□ -0.59
TMEM248-204ENST00000424964 GPN1Q9HCN4 374 aaPredicted RBP11.36□□□□□ -0.59
TMEM248-204ENST00000424964 IAPPP10997 89 aa11.35□□□□□ -0.59
TMEM248-204ENST00000424964 NPY1RP25929 384 aa11.35□□□□□ -0.59
TMEM248-204ENST00000424964 OPRK1P41145 380 aa11.35□□□□□ -0.59
TMEM248-204ENST00000424964 IAH1Q2TAA2 248 aaPredicted RBP11.35□□□□□ -0.59
TMEM248-204ENST00000424964 BEAN1Q3B7T3 259 aa11.35□□□□□ -0.59
TMEM248-204ENST00000424964 BSXQ3C1V8 233 aa11.35□□□□□ -0.59
TMEM248-204ENST00000424964 C2orf83Q53S99 150 aa11.35□□□□□ -0.59
TMEM248-204ENST00000424964 ACSM6Q6P461 480 aa11.35□□□□□ -0.59
TMEM248-204ENST00000424964 OR4C12Q96R67 309 aa11.35□□□□□ -0.59
TMEM248-204ENST00000424964 ELOVL1Q9BW60 279 aa11.35□□□□□ -0.59
TMEM248-204ENST00000424964 GSKIPQ9P0R6 139 aa11.35□□□□□ -0.59
TMEM248-204ENST00000424964 U3KQ87 197 aa11.35□□□□□ -0.59
TMEM248-204ENST00000424964 C5orf51A6NDU8 294 aa11.34□□□□□ -0.59
TMEM248-204ENST00000424964 FAM25EA8MYX2 175 aa11.34□□□□□ -0.59
TMEM248-204ENST00000424964 CCSO14618 274 aa11.34□□□□□ -0.59
TMEM248-204ENST00000424964 TGOLN2O43493 480 aa11.34□□□□□ -0.59
TMEM248-204ENST00000424964 SYNGR2O43760 224 aa11.34□□□□□ -0.59
TMEM248-204ENST00000424964 SAP30O75446 220 aa11.34□□□□□ -0.59
TMEM248-204ENST00000424964 NKX2-1P43699 371 aaPredicted RBP11.34□□□□□ -0.59
TMEM248-204ENST00000424964 FAM106AQ4KMX7 169 aa11.34□□□□□ -0.59
TMEM248-204ENST00000424964 PVRIGQ6DKI7 326 aa11.34□□□□□ -0.59
TMEM248-204ENST00000424964 OR9G4Q8NGQ1 327 aa11.34□□□□□ -0.59
TMEM248-204ENST00000424964 BSCL2Q96G97 398 aaPredicted RBP11.34□□□□□ -0.59
TMEM248-204ENST00000424964 OR10C1Q96KK4 312 aa11.34□□□□□ -0.59
TMEM248-204ENST00000424964 MARVELD1Q9BSK0 173 aa11.34□□□□□ -0.59
TMEM248-204ENST00000424964 GAR1Q9NY12 217 aaKnown RBP11.34□□□□□ -0.59
TMEM248-204ENST00000424964 IGHV3-35A0A0C4DH35 117 aa11.33□□□□□ -0.6
TMEM248-204ENST00000424964 RPS10-NUDT3A0A1W2PQS6 291 aa11.33□□□□□ -0.6
TMEM248-204ENST00000424964 ZNF320A2RRD8 509 aa11.33□□□□□ -0.6
TMEM248-204ENST00000424964 WRBO00258 174 aa11.33□□□□□ -0.6
TMEM248-204ENST00000424964 PRAF2O60831 178 aa11.33□□□□□ -0.6
TMEM248-204ENST00000424964 SCGB1D2O95969 90 aa11.33□□□□□ -0.6
TMEM248-204ENST00000424964 SPNP16150 400 aa11.33□□□□□ -0.6
TMEM248-204ENST00000424964 INSL3P51460 131 aa11.33□□□□□ -0.6
TMEM248-204ENST00000424964 DEFA6Q01524 100 aa11.33□□□□□ -0.6
TMEM248-204ENST00000424964 ID3Q02535 119 aa11.33□□□□□ -0.6
TMEM248-204ENST00000424964 MLANAQ16655 118 aa11.33□□□□□ -0.6
TMEM248-204ENST00000424964 SPSB3Q6PJ21 355 aa11.33□□□□□ -0.6
TMEM248-204ENST00000424964 GPHB5Q86YW7 130 aa11.33□□□□□ -0.6
TMEM248-204ENST00000424964 ZBTB8BQ8NAP8 495 aaPredicted RBP11.33□□□□□ -0.6
TMEM248-204ENST00000424964 OR4D5Q8NGN0 318 aa11.33□□□□□ -0.6
TMEM248-204ENST00000424964 RNASEH2CQ8TDP1 164 aaKnown RBP11.33□□□□□ -0.6
TMEM248-204ENST00000424964 CIB3Q96Q77 187 aaPredicted RBP11.33□□□□□ -0.6
TMEM248-204ENST00000424964 ATP6V0BQ99437 205 aa11.33□□□□□ -0.6
TMEM248-204ENST00000424964 TXN2Q99757 166 aa11.33□□□□□ -0.6
TMEM248-204ENST00000424964 PEMTQ9UBM1 199 aa11.33□□□□□ -0.6
TMEM248-204ENST00000424964 PAIP2BQ9ULR5 123 aaKnown RBP11.33□□□□□ -0.6
TMEM248-204ENST00000424964 NBEAL1Q6ZS30 2694 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms