RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 IFNA17P01571 189 aa12□□□□□ -0.49
CHCHD3-202ENST00000423635 NPY1RP25929 384 aa12□□□□□ -0.49
CHCHD3-202ENST00000423635 GNRHRP30968 328 aa12□□□□□ -0.49
CHCHD3-202ENST00000423635 RPL11P62913 178 aaKnown RBP12□□□□□ -0.49
CHCHD3-202ENST00000423635 AADACL3Q5VUY0 350 aa12□□□□□ -0.49
CHCHD3-202ENST00000423635 GRAMD2BQ96HH9 432 aa12□□□□□ -0.49
CHCHD3-202ENST00000423635 DNAH5Q8TE73 4624 aa11.99□□□□□ -0.49
CHCHD3-202ENST00000423635 IGLV2-18A0A075B6J9 118 aa11.99□□□□□ -0.49
CHCHD3-202ENST00000423635 GNG7O60262 68 aa11.99□□□□□ -0.49
CHCHD3-202ENST00000423635 MT-CO2P00403 227 aa11.99□□□□□ -0.49
CHCHD3-202ENST00000423635 F2RP25116 425 aa11.99□□□□□ -0.49
CHCHD3-202ENST00000423635 FXYD4P59646 89 aa11.99□□□□□ -0.49
CHCHD3-202ENST00000423635 UBE2UQ5VVX9 321 aa11.99□□□□□ -0.49
CHCHD3-202ENST00000423635 PRSS48Q7RTY5 328 aa11.99□□□□□ -0.49
CHCHD3-202ENST00000423635 MISP3Q96FF7 219 aa11.99□□□□□ -0.49
CHCHD3-202ENST00000423635 ZFAND3Q9H8U3 227 aa11.99□□□□□ -0.49
CHCHD3-202ENST00000423635 CLEC5AQ9NY25 188 aa11.99□□□□□ -0.49
CHCHD3-202ENST00000423635 RABAC1Q9UI14 185 aa11.99□□□□□ -0.49
CHCHD3-202ENST00000423635 PRNDQ9UKY0 176 aa11.99□□□□□ -0.49
CHCHD3-202ENST00000423635 APOBP04114 4563 aaKnown RBP11.99□□□□□ -0.49
CHCHD3-202ENST00000423635 IGHV3-66A0A0C4DH42 116 aa11.98□□□□□ -0.49
CHCHD3-202ENST00000423635 DBX1A6NMT0 343 aa11.98□□□□□ -0.49
CHCHD3-202ENST00000423635 KRASP01116 189 aa11.98□□□□□ -0.49
CHCHD3-202ENST00000423635 MAPKAPK5-AS1Q8N8E1 139 aa11.98□□□□□ -0.49
CHCHD3-202ENST00000423635 ZNF114Q8NC26 417 aa11.98□□□□□ -0.49
CHCHD3-202ENST00000423635 FCAMRQ8WWV6 532 aa11.98□□□□□ -0.49
CHCHD3-202ENST00000423635 BORCS5Q969J3 196 aa11.98□□□□□ -0.49
CHCHD3-202ENST00000423635 FAM210BQ96KR6 192 aa11.98□□□□□ -0.49
CHCHD3-202ENST00000423635 TMEM231Q9H6L2 316 aa11.98□□□□□ -0.49
CHCHD3-202ENST00000423635 KNCNA6PVL3 124 aa11.97□□□□□ -0.49
CHCHD3-202ENST00000423635 NOTOA8MTQ0 251 aa11.97□□□□□ -0.49
CHCHD3-202ENST00000423635 PGLYRP1O75594 196 aaPredicted RBP11.97□□□□□ -0.49
CHCHD3-202ENST00000423635 IGHV3-48P01763 117 aa11.97□□□□□ -0.49
CHCHD3-202ENST00000423635 G6PCP35575 357 aa11.97□□□□□ -0.49
CHCHD3-202ENST00000423635 LPAR6P43657 344 aa11.97□□□□□ -0.49
CHCHD3-202ENST00000423635 RNF212Q495C1 297 aa11.97□□□□□ -0.49
CHCHD3-202ENST00000423635 C1orf134Q5TEV5 83 aa11.97□□□□□ -0.49
CHCHD3-202ENST00000423635 ZNF600Q6ZNG1 722 aa11.97□□□□□ -0.49
CHCHD3-202ENST00000423635 NDUFB11Q9NX14 153 aa11.97□□□□□ -0.49
CHCHD3-202ENST00000423635 A0A1W2PS18 150 aa11.96□□□□□ -0.49
CHCHD3-202ENST00000423635 ACTL10Q5JWF8 245 aa11.96□□□□□ -0.49
CHCHD3-202ENST00000423635 TPRA1Q86W33 373 aa11.96□□□□□ -0.49
CHCHD3-202ENST00000423635 UBE2DNLQ8IWF7 75 aa11.96□□□□□ -0.49
CHCHD3-202ENST00000423635 OR5AP2Q8NGF4 316 aa11.96□□□□□ -0.49
CHCHD3-202ENST00000423635 DCANP1Q8TF63 244 aa11.96□□□□□ -0.49
CHCHD3-202ENST00000423635 TSC22D3Q99576 134 aa11.96□□□□□ -0.49
CHCHD3-202ENST00000423635 PUS1Q9Y606 427 aaKnown RBP eCLIP11.96□□□□□ -0.49
CHCHD3-202ENST00000423635 C16orf90A8MZG2 172 aa11.95□□□□□ -0.5
CHCHD3-202ENST00000423635 ZNF688P0C7X2 276 aa11.95□□□□□ -0.5
CHCHD3-202ENST00000423635 NPPCP23582 126 aa11.95□□□□□ -0.5
CHCHD3-202ENST00000423635 NPBWR1P48145 328 aa11.95□□□□□ -0.5
CHCHD3-202ENST00000423635 C22orf42Q6IC83 251 aa11.95□□□□□ -0.5
CHCHD3-202ENST00000423635 DHRS11Q6UWP2 260 aa11.95□□□□□ -0.5
CHCHD3-202ENST00000423635 TMEM17Q86X19 198 aa11.95□□□□□ -0.5
CHCHD3-202ENST00000423635 Q8N1X5 172 aa11.95□□□□□ -0.5
CHCHD3-202ENST00000423635 A0A1B0GU03 582 aa11.94□□□□□ -0.5
CHCHD3-202ENST00000423635 SMIM30A4D0T7 59 aa11.94□□□□□ -0.5
CHCHD3-202ENST00000423635 TMEM50AO95807 157 aa11.94□□□□□ -0.5
CHCHD3-202ENST00000423635 RLN1P04808 185 aa11.94□□□□□ -0.5
CHCHD3-202ENST00000423635 ZNF367Q7RTV3 350 aa11.94□□□□□ -0.5
CHCHD3-202ENST00000423635 STXBP6Q8NFX7 210 aa11.94□□□□□ -0.5
CHCHD3-202ENST00000423635 PINX1Q96BK5 328 aaKnown RBP11.94□□□□□ -0.5
CHCHD3-202ENST00000423635 MOB3AQ96BX8 217 aa11.94□□□□□ -0.5
CHCHD3-202ENST00000423635 RAB40CQ96S21 281 aa11.94□□□□□ -0.5
CHCHD3-202ENST00000423635 C1QTNF4Q9BXJ3 329 aa11.94□□□□□ -0.5
CHCHD3-202ENST00000423635 VCXQ9H320 206 aa11.94□□□□□ -0.5
CHCHD3-202ENST00000423635 RHBDL2Q9NX52 303 aa11.94□□□□□ -0.5
CHCHD3-202ENST00000423635 TRAV18A0A075B6X5 111 aa11.93□□□□□ -0.5
CHCHD3-202ENST00000423635 SPART-AS1P0CW21 52 aa11.93□□□□□ -0.5
CHCHD3-202ENST00000423635 CRYBB3P26998 211 aa11.93□□□□□ -0.5
CHCHD3-202ENST00000423635 TBCEQ15813 527 aaPredicted RBP11.93□□□□□ -0.5
CHCHD3-202ENST00000423635 NEU1Q99519 415 aa11.93□□□□□ -0.5
CHCHD3-202ENST00000423635 HERV-K104P61576 105 aa11.92□□□□□ -0.5
CHCHD3-202ENST00000423635 NUTF2P61970 127 aaKnown RBP11.92□□□□□ -0.5
CHCHD3-202ENST00000423635 PRCDQ00LT1 54 aa11.92□□□□□ -0.5
CHCHD3-202ENST00000423635 KCTD21Q4G0X4 260 aa11.92□□□□□ -0.5
CHCHD3-202ENST00000423635 TSPAN14Q8NG11 270 aa11.92□□□□□ -0.5
CHCHD3-202ENST00000423635 LGALS14Q8TCE9 139 aa11.92□□□□□ -0.5
CHCHD3-202ENST00000423635 DAPK2Q9UIK4 370 aa11.92□□□□□ -0.5
CHCHD3-202ENST00000423635 FGF9P31371 208 aaPredicted RBP11.91□□□□□ -0.5
CHCHD3-202ENST00000423635 P2RY1P47900 373 aa11.91□□□□□ -0.5
CHCHD3-202ENST00000423635 ERHP84090 104 aaKnown RBP11.91□□□□□ -0.5
CHCHD3-202ENST00000423635 TNP2Q05952 138 aa11.91□□□□□ -0.5
CHCHD3-202ENST00000423635 ZNF705AQ6ZN79 300 aaPredicted RBP11.91□□□□□ -0.5
CHCHD3-202ENST00000423635 METTL26Q96S19 204 aa11.91□□□□□ -0.5
CHCHD3-202ENST00000423635 FAM212BQ9NTI7 297 aaPredicted RBP11.91□□□□□ -0.5
CHCHD3-202ENST00000423635 A0A0A6YYH2 397 aa11.9□□□□□ -0.5
CHCHD3-202ENST00000423635 TMEM189A5PLL7 270 aa11.9□□□□□ -0.5
CHCHD3-202ENST00000423635 A6NJ64 397 aa11.9□□□□□ -0.5
CHCHD3-202ENST00000423635 FCER2P06734 321 aa11.9□□□□□ -0.5
CHCHD3-202ENST00000423635 CBX5P45973 191 aa11.9□□□□□ -0.5
CHCHD3-202ENST00000423635 SCAND1P57086 179 aa11.9□□□□□ -0.5
CHCHD3-202ENST00000423635 HSPE1P61604 102 aaKnown RBP11.9□□□□□ -0.5
CHCHD3-202ENST00000423635 CMTM1Q8IZ96 169 aa11.9□□□□□ -0.5
CHCHD3-202ENST00000423635 SEC22AQ96IW7 307 aa11.9□□□□□ -0.5
CHCHD3-202ENST00000423635 AUNIPQ9H7T9 357 aa11.9□□□□□ -0.5
CHCHD3-202ENST00000423635 XCL2Q9UBD3 114 aa11.9□□□□□ -0.5
CHCHD3-202ENST00000423635 NACAE9PAV3 2078 aa11.9□□□□□ -0.51
CHCHD3-202ENST00000423635 SMIM9A6NGZ8 99 aa11.89□□□□□ -0.51
CHCHD3-202ENST00000423635 FAM3BP58499 235 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms