RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 SELENOHQ8IZQ5 122 aaKnown RBP8.33□□□□□ -1.08
USP49-204ENST00000423567 OR2K2Q8NGT1 345 aa8.33□□□□□ -1.08
USP49-204ENST00000423567 SCARB1Q8WTV0 552 aa8.33□□□□□ -1.08
USP49-204ENST00000423567 IL22RA2Q969J5 263 aa8.33□□□□□ -1.08
USP49-204ENST00000423567 GALNT14Q96FL9 552 aa8.33□□□□□ -1.08
USP49-204ENST00000423567 BSCL2Q96G97 398 aaPredicted RBP8.33□□□□□ -1.08
USP49-204ENST00000423567 SLC25A21Q9BQT8 299 aaPredicted RBP8.33□□□□□ -1.08
USP49-204ENST00000423567 SRRQ9GZT4 340 aa8.33□□□□□ -1.08
USP49-204ENST00000423567 ZC4H2Q9NQZ6 224 aa8.33□□□□□ -1.08
USP49-204ENST00000423567 TMEM56-RWDD3S4R434 201 aa8.33□□□□□ -1.08
USP49-204ENST00000423567 IGHV3-21A0A0B4J1V1 117 aa8.32□□□□□ -1.08
USP49-204ENST00000423567 A0A0G2JRQ6 117 aa8.32□□□□□ -1.08
USP49-204ENST00000423567 NAP1L6A6NFF2 107 aa8.32□□□□□ -1.08
USP49-204ENST00000423567 OR2T8A6NH00 312 aa8.32□□□□□ -1.08
USP49-204ENST00000423567 C2orf70A6NJV1 201 aa8.32□□□□□ -1.08
USP49-204ENST00000423567 FOLR2P14207 255 aa8.32□□□□□ -1.08
USP49-204ENST00000423567 MFAP2P55001 183 aa8.32□□□□□ -1.08
USP49-204ENST00000423567 SPCS3P61009 180 aa8.32□□□□□ -1.08
USP49-204ENST00000423567 TMEM187Q14656 261 aa8.32□□□□□ -1.08
USP49-204ENST00000423567 GTSCR1Q86UQ5 136 aa8.32□□□□□ -1.08
USP49-204ENST00000423567 LGI3Q8N145 548 aa8.32□□□□□ -1.08
USP49-204ENST00000423567 OR52E5Q8NH55 327 aa8.32□□□□□ -1.08
USP49-204ENST00000423567 LHFPL5Q8TAF8 219 aa8.32□□□□□ -1.08
USP49-204ENST00000423567 TMEM230Q96A57 120 aa8.32□□□□□ -1.08
USP49-204ENST00000423567 PINX1Q96BK5 328 aaKnown RBP8.32□□□□□ -1.08
USP49-204ENST00000423567 TECRQ9NZ01 308 aaKnown RBP8.32□□□□□ -1.08
USP49-204ENST00000423567 CACNG5Q9UF02 275 aa8.32□□□□□ -1.08
USP49-204ENST00000423567 UFC1Q9Y3C8 167 aa8.32□□□□□ -1.08
USP49-204ENST00000423567 PRKDCP78527 4128 aaKnown RBP8.32□□□□□ -1.08
USP49-204ENST00000423567 A0A0B4J2A0 478 aa8.31□□□□□ -1.08
USP49-204ENST00000423567 CENPXA8MT69 81 aa8.31□□□□□ -1.08
USP49-204ENST00000423567 CEBPZOSA8MTT3 80 aa8.31□□□□□ -1.08
USP49-204ENST00000423567 A8MWP6 167 aa8.31□□□□□ -1.08
USP49-204ENST00000423567 INS-IGF2F8WCM5 200 aa8.31□□□□□ -1.08
USP49-204ENST00000423567 K7EIM0 57 aa8.31□□□□□ -1.08
USP49-204ENST00000423567 CORTO00230 105 aa8.31□□□□□ -1.08
USP49-204ENST00000423567 NUPL2O15504 423 aaKnown RBP8.31□□□□□ -1.08
USP49-204ENST00000423567 SULT1A3P0DMM9 295 aa8.31□□□□□ -1.08
USP49-204ENST00000423567 SULT1A4P0DMN0 295 aa8.31□□□□□ -1.08
USP49-204ENST00000423567 MFAP4P55083 255 aa8.31□□□□□ -1.08
USP49-204ENST00000423567 RBMS2Q15434 407 aaKnown RBP8.31□□□□□ -1.08
USP49-204ENST00000423567 TMEM128Q5BJH2 165 aa8.31□□□□□ -1.08
USP49-204ENST00000423567 MARC2Q969Z3 335 aa8.31□□□□□ -1.08
USP49-204ENST00000423567 GPR146Q96CH1 333 aa8.31□□□□□ -1.08
USP49-204ENST00000423567 TXN2Q99757 166 aa8.31□□□□□ -1.08
USP49-204ENST00000423567 SHPKQ9UHJ6 478 aa8.31□□□□□ -1.08
USP49-204ENST00000423567 TGP01266 2768 aa8.3□□□□□ -1.08
USP49-204ENST00000423567 IGHV3-35A0A0C4DH35 117 aa8.3□□□□□ -1.08
USP49-204ENST00000423567 I3L2K1 104 aa8.3□□□□□ -1.08
USP49-204ENST00000423567 NDUFA4O00483 81 aa8.3□□□□□ -1.08
USP49-204ENST00000423567 GNG7O60262 68 aa8.3□□□□□ -1.08
USP49-204ENST00000423567 SCGB2A1O75556 95 aa8.3□□□□□ -1.08
USP49-204ENST00000423567 MT-CO2P00403 227 aa8.3□□□□□ -1.08
USP49-204ENST00000423567 NHLRC4P0CG21 123 aaPredicted RBP8.3□□□□□ -1.08
USP49-204ENST00000423567 CBLN1P23435 193 aa8.3□□□□□ -1.08
USP49-204ENST00000423567 VAMP1P23763 118 aa8.3□□□□□ -1.08
USP49-204ENST00000423567 NPBWR1P48145 328 aa8.3□□□□□ -1.08
USP49-204ENST00000423567 ELLP55199 621 aaPredicted RBP8.3□□□□□ -1.08
USP49-204ENST00000423567 RELQ04864 619 aaPredicted RBP8.3□□□□□ -1.08
USP49-204ENST00000423567 GUCA2BQ16661 112 aa8.3□□□□□ -1.08
USP49-204ENST00000423567 CD300EQ496F6 205 aaPredicted RBP8.3□□□□□ -1.08
USP49-204ENST00000423567 Q6ZRM9 215 aa8.3□□□□□ -1.08
USP49-204ENST00000423567 CENPSQ8N2Z9 138 aa8.3□□□□□ -1.08
USP49-204ENST00000423567 DUSP18Q8NEJ0 188 aa8.3□□□□□ -1.08
USP49-204ENST00000423567 HEYLQ9NQ87 328 aaPredicted RBP8.3□□□□□ -1.08
USP49-204ENST00000423567 DNAH3Q8TD57 4116 aa8.3□□□□□ -1.08
USP49-204ENST00000423567 LINC00854A0A1B0GVQ3 168 aa8.29□□□□□ -1.08
USP49-204ENST00000423567 DUXBA0A1W2PPF3 345 aa8.29□□□□□ -1.08
USP49-204ENST00000423567 TMEM213A2RRL7 107 aa8.29□□□□□ -1.08
USP49-204ENST00000423567 FCGR2BP31994 310 aaPredicted RBP8.29□□□□□ -1.08
USP49-204ENST00000423567 HTR2BP41595 481 aa8.29□□□□□ -1.08
USP49-204ENST00000423567 CCR6P51684 374 aa8.29□□□□□ -1.08
USP49-204ENST00000423567 SUPT4H1P63272 117 aaKnown RBP8.29□□□□□ -1.08
USP49-204ENST00000423567 BAK1Q16611 211 aa8.29□□□□□ -1.08
USP49-204ENST00000423567 DEFB114Q30KQ6 69 aa8.29□□□□□ -1.08
USP49-204ENST00000423567 AARDQ4LEZ3 155 aa8.29□□□□□ -1.08
USP49-204ENST00000423567 TM4SF20Q53R12 229 aa8.29□□□□□ -1.08
USP49-204ENST00000423567 UXS1Q8NBZ7 420 aa8.29□□□□□ -1.08
USP49-204ENST00000423567 CACNG8Q8WXS5 425 aa8.29□□□□□ -1.08
USP49-204ENST00000423567 TMEM190Q8WZ59 177 aa8.29□□□□□ -1.08
USP49-204ENST00000423567 C7orf50Q9BRJ6 194 aaKnown RBP8.29□□□□□ -1.08
USP49-204ENST00000423567 CHRDL1Q9BU40 450 aa8.29□□□□□ -1.08
USP49-204ENST00000423567 C20orf24Q9BUV8 137 aa8.29□□□□□ -1.08
USP49-204ENST00000423567 ZNF436Q9C0F3 470 aaPredicted RBP8.29□□□□□ -1.08
USP49-204ENST00000423567 HIPK2Q9H2X6 1198 aa8.29□□□□□ -1.08
USP49-204ENST00000423567 DAZ1Q9NQZ3 744 aaKnown RBP8.29□□□□□ -1.08
USP49-204ENST00000423567 PRR13Q9NZ81 148 aa8.29□□□□□ -1.08
USP49-204ENST00000423567 MRPL27Q9P0M9 148 aaKnown RBP8.29□□□□□ -1.08
USP49-204ENST00000423567 RPS10-NUDT3A0A1W2PQS6 291 aa8.28□□□□□ -1.08
USP49-204ENST00000423567 YIF1AO95070 293 aa8.28□□□□□ -1.08
USP49-204ENST00000423567 CTSGP08311 255 aa8.28□□□□□ -1.08
USP49-204ENST00000423567 RNASE2P10153 161 aaKnown RBP8.28□□□□□ -1.08
USP49-204ENST00000423567 OPRK1P41145 380 aa8.28□□□□□ -1.08
USP49-204ENST00000423567 CD81P60033 236 aa8.28□□□□□ -1.08
USP49-204ENST00000423567 UBE2MP61081 183 aaKnown RBP8.28□□□□□ -1.08
USP49-204ENST00000423567 SMCO1Q147U7 214 aa8.28□□□□□ -1.08
USP49-204ENST00000423567 UNQ9165/PRO28630Q6UXU0 137 aa8.28□□□□□ -1.08
USP49-204ENST00000423567 ADAMTSL5Q6ZMM2 481 aa8.28□□□□□ -1.08
USP49-204ENST00000423567 RBPMS2Q6ZRY4 209 aaKnown RBP8.28□□□□□ -1.08
USP49-204ENST00000423567 LYZL2Q7Z4W2 148 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms