RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 C11orf68Q9H3H3 251 aaKnown RBP1□□□□□ -2.25
LINC00397-201ENST00000422074 PARVGQ9HBI0 331 aa1□□□□□ -2.25
LINC00397-201ENST00000422074 SLC39A9Q9NUM3 307 aa1□□□□□ -2.25
LINC00397-201ENST00000422074 VPS29Q9UBQ0 182 aa1□□□□□ -2.25
LINC00397-201ENST00000422074 TMEM56-RWDD3S4R434 201 aa1□□□□□ -2.25
LINC00397-201ENST00000422074 CCDC88AQ3V6T2 1871 aa1□□□□□ -2.25
LINC00397-201ENST00000422074 STRCQ7RTU9 1775 aa0.99□□□□□ -2.25
LINC00397-201ENST00000422074 EXOC1LA0A1B0GW35 172 aa0.99□□□□□ -2.25
LINC00397-201ENST00000422074 PQLC2LA1A4F0 135 aa0.99□□□□□ -2.25
LINC00397-201ENST00000422074 FAAHO00519 579 aa0.99□□□□□ -2.25
LINC00397-201ENST00000422074 HCRTO43612 131 aa0.99□□□□□ -2.25
LINC00397-201ENST00000422074 CHP2O43745 196 aa0.99□□□□□ -2.25
LINC00397-201ENST00000422074 RPP14O95059 124 aaKnown RBP0.99□□□□□ -2.25
LINC00397-201ENST00000422074 CLPSP04118 112 aa0.99□□□□□ -2.25
LINC00397-201ENST00000422074 RPS17P08708 135 aaKnown RBP0.99□□□□□ -2.25
LINC00397-201ENST00000422074 DEFA1P59665 94 aa0.99□□□□□ -2.25
LINC00397-201ENST00000422074 PLCXD2Q0VAA5 305 aa0.99□□□□□ -2.25
LINC00397-201ENST00000422074 ITGB3BPQ13352 177 aaPredicted RBP0.99□□□□□ -2.25
LINC00397-201ENST00000422074 SPANXN5Q5MJ07 72 aa0.99□□□□□ -2.25
LINC00397-201ENST00000422074 KRTAP5-10Q6L8G5 202 aa0.99□□□□□ -2.25
LINC00397-201ENST00000422074 DEFB128Q7Z7B8 93 aa0.99□□□□□ -2.25
LINC00397-201ENST00000422074 ZNF565Q8N9K5 539 aa0.99□□□□□ -2.25
LINC00397-201ENST00000422074 C15orf53Q8NAA6 179 aa0.99□□□□□ -2.25
LINC00397-201ENST00000422074 OR4C6Q8NH72 309 aa0.99□□□□□ -2.25
LINC00397-201ENST00000422074 AQP3Q92482 292 aa0.99□□□□□ -2.25
LINC00397-201ENST00000422074 TOMM6Q96B49 74 aa0.99□□□□□ -2.25
LINC00397-201ENST00000422074 PPP1R2P1Q96PQ5 205 aa0.99□□□□□ -2.25
LINC00397-201ENST00000422074 SLC50A1Q9BRV3 221 aa0.99□□□□□ -2.25
LINC00397-201ENST00000422074 TRABDQ9H4I3 376 aa0.99□□□□□ -2.25
LINC00397-201ENST00000422074 ERGIC3Q9Y282 383 aa0.99□□□□□ -2.25
LINC00397-201ENST00000422074 FN1P02751 2386 aaKnown RBP0.99□□□□□ -2.25
LINC00397-201ENST00000422074 ADCY9O60503 1353 aa0.98□□□□□ -2.25
LINC00397-201ENST00000422074 NUP155O75694 1391 aa0.98□□□□□ -2.25
LINC00397-201ENST00000422074 MTUS2Q5JR59 1369 aa0.98□□□□□ -2.25
LINC00397-201ENST00000422074 IGKV1D-42A0A075B6H8 117 aa0.98□□□□□ -2.25
LINC00397-201ENST00000422074 A0A0D9SG52 128 aa0.98□□□□□ -2.25
LINC00397-201ENST00000422074 CLDN24A6NM45 220 aa0.98□□□□□ -2.25
LINC00397-201ENST00000422074 LYPLA2O95372 231 aa0.98□□□□□ -2.25
LINC00397-201ENST00000422074 ASAH2BP0C7U1 165 aa0.98□□□□□ -2.25
LINC00397-201ENST00000422074 SPI1P17947 270 aa0.98□□□□□ -2.25
LINC00397-201ENST00000422074 S100A4P26447 101 aaKnown RBP0.98□□□□□ -2.25
LINC00397-201ENST00000422074 FKBP2P26885 142 aaKnown RBP0.98□□□□□ -2.25
LINC00397-201ENST00000422074 BRS3P32247 399 aa0.98□□□□□ -2.25
LINC00397-201ENST00000422074 UBE2IP63279 158 aaKnown RBP0.98□□□□□ -2.25
LINC00397-201ENST00000422074 ZNF846Q147U1 533 aa0.98□□□□□ -2.25
LINC00397-201ENST00000422074 ACOT6Q3I5F7 207 aaPredicted RBP0.98□□□□□ -2.25
LINC00397-201ENST00000422074 TEX36Q5VZQ5 186 aa0.98□□□□□ -2.25
LINC00397-201ENST00000422074 ZNF826PQ6ZT77 177 aa0.98□□□□□ -2.25
LINC00397-201ENST00000422074 HIST3H2BBQ8N257 126 aa0.98□□□□□ -2.25
LINC00397-201ENST00000422074 CLDN22Q8N7P3 220 aa0.98□□□□□ -2.25
LINC00397-201ENST00000422074 PFN4Q8NHR9 129 aa0.98□□□□□ -2.25
LINC00397-201ENST00000422074 C8orf76Q96K31 380 aa0.98□□□□□ -2.25
LINC00397-201ENST00000422074 NIPSNAP1Q9BPW8 284 aa0.98□□□□□ -2.25
LINC00397-201ENST00000422074 TMEM147Q9BVK8 224 aa0.98□□□□□ -2.25
LINC00397-201ENST00000422074 CCDC90BQ9GZT6 254 aa0.98□□□□□ -2.25
LINC00397-201ENST00000422074 TP73-AS1Q9UF72 201 aa0.98□□□□□ -2.25
LINC00397-201ENST00000422074 WRNQ14191 1432 aaPredicted RBP eCLIP0.98□□□□□ -2.25
LINC00397-201ENST00000422074 NUMA1Q14980 2115 aa0.97□□□□□ -2.25
LINC00397-201ENST00000422074 OR4C46A6NHA9 309 aa0.97□□□□□ -2.25
LINC00397-201ENST00000422074 GEMIN2O14893 280 aaKnown RBP0.97□□□□□ -2.25
LINC00397-201ENST00000422074 FADS1O60427 444 aa0.97□□□□□ -2.25
LINC00397-201ENST00000422074 SERPINA6P08185 405 aa0.97□□□□□ -2.25
LINC00397-201ENST00000422074 CRYGAP11844 174 aa0.97□□□□□ -2.25
LINC00397-201ENST00000422074 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.97□□□□□ -2.25
LINC00397-201ENST00000422074 TRAPPC6BQ86SZ2 158 aa0.97□□□□□ -2.25
LINC00397-201ENST00000422074 OOSP2Q86WS3 158 aa0.97□□□□□ -2.25
LINC00397-201ENST00000422074 PHF13Q86YI8 300 aaPredicted RBP0.97□□□□□ -2.25
LINC00397-201ENST00000422074 SIGLECL1Q8N7X8 197 aa0.97□□□□□ -2.25
LINC00397-201ENST00000422074 OR5A1Q8NGJ0 315 aa0.97□□□□□ -2.25
LINC00397-201ENST00000422074 H1FXQ92522 213 aaKnown RBP0.97□□□□□ -2.25
LINC00397-201ENST00000422074 TSPAN32Q96QS1 320 aa0.97□□□□□ -2.25
LINC00397-201ENST00000422074 PARD6GQ9BYG4 376 aaPredicted RBP0.97□□□□□ -2.25
LINC00397-201ENST00000422074 KIAA2026Q5HYC2 2103 aa0.97□□□□□ -2.25
LINC00397-201ENST00000422074 CCDC88CQ9P219 2028 aa0.96□□□□□ -2.26
LINC00397-201ENST00000422074 TCL1BO95988 128 aa0.96□□□□□ -2.26
LINC00397-201ENST00000422074 RBP1P09455 135 aa0.96□□□□□ -2.26
LINC00397-201ENST00000422074 COX6A1P12074 109 aa0.96□□□□□ -2.26
LINC00397-201ENST00000422074 RPS20P60866 119 aaKnown RBP0.96□□□□□ -2.26
LINC00397-201ENST00000422074 RHEBQ15382 184 aa0.96□□□□□ -2.26
LINC00397-201ENST00000422074 TERB2Q8NHR7 220 aa0.96□□□□□ -2.26
LINC00397-201ENST00000422074 ODF3Q96PU9 254 aa0.96□□□□□ -2.26
LINC00397-201ENST00000422074 UBAP1Q9NZ09 502 aa0.96□□□□□ -2.26
LINC00397-201ENST00000422074 HECW1Q76N89 1606 aa0.96□□□□□ -2.26
LINC00397-201ENST00000422074 ECM29Q5VYK3 1845 aa0.96□□□□□ -2.26
LINC00397-201ENST00000422074 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
LINC00397-201ENST00000422074 PCDH15Q96QU1 1955 aa0.96□□□□□ -2.26
LINC00397-201ENST00000422074 HECW2Q9P2P5 1572 aa0.96□□□□□ -2.26
LINC00397-201ENST00000422074 TRAV1-1A0A0B4J248 108 aa0.95□□□□□ -2.26
LINC00397-201ENST00000422074 TRAV26-2A0A0B4J265 109 aa0.95□□□□□ -2.26
LINC00397-201ENST00000422074 OR2B3O76000 313 aa0.95□□□□□ -2.26
LINC00397-201ENST00000422074 CDC42P60953 191 aa0.95□□□□□ -2.26
LINC00397-201ENST00000422074 DEFB115Q30KQ5 88 aa0.95□□□□□ -2.26
LINC00397-201ENST00000422074 OR8J2Q8NGG1 315 aa0.95□□□□□ -2.26
LINC00397-201ENST00000422074 BORCS7Q96B45 105 aa0.95□□□□□ -2.26
LINC00397-201ENST00000422074 MRPL57Q9BQC6 102 aaKnown RBP0.95□□□□□ -2.26
LINC00397-201ENST00000422074 TRIM4Q9C037 500 aa0.95□□□□□ -2.26
LINC00397-201ENST00000422074 OSTCQ9NRP0 149 aa0.95□□□□□ -2.26
LINC00397-201ENST00000422074 MRPL27Q9P0M9 148 aaKnown RBP0.95□□□□□ -2.26
LINC00397-201ENST00000422074 DOCK5Q9H7D0 1870 aa0.95□□□□□ -2.26
LINC00397-201ENST00000422074 CUL9Q8IWT3 2517 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms