RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 LPCAT3Q6P1A2 487 aa13.62□□□□□ -0.23
AC004540.1-203ENST00000421862 TBC1D26Q86UD7 250 aa13.62□□□□□ -0.23
AC004540.1-203ENST00000421862 OR11H2Q8NH07 326 aa13.62□□□□□ -0.23
AC004540.1-203ENST00000421862 C11orf45Q8TAV5 145 aa13.62□□□□□ -0.23
AC004540.1-203ENST00000421862 CMTM3Q96MX0 182 aa13.62□□□□□ -0.23
AC004540.1-203ENST00000421862 GINS3Q9BRX5 216 aa13.62□□□□□ -0.23
AC004540.1-203ENST00000421862 IGKV3-7A0A075B6H7 116 aa13.61□□□□□ -0.23
AC004540.1-203ENST00000421862 GNG7O60262 68 aa13.61□□□□□ -0.23
AC004540.1-203ENST00000421862 HLA-DMAP28067 261 aa13.61□□□□□ -0.23
AC004540.1-203ENST00000421862 UCP3P55916 312 aa13.61□□□□□ -0.23
AC004540.1-203ENST00000421862 RBMS2Q15434 407 aaKnown RBP13.61□□□□□ -0.23
AC004540.1-203ENST00000421862 TOMM20LQ6UXN7 152 aa13.61□□□□□ -0.23
AC004540.1-203ENST00000421862 TCF24Q7RTU0 167 aa13.61□□□□□ -0.23
AC004540.1-203ENST00000421862 H2BFWTQ7Z2G1 175 aa13.61□□□□□ -0.23
AC004540.1-203ENST00000421862 ST8SIA2Q92186 375 aa13.61□□□□□ -0.23
AC004540.1-203ENST00000421862 MRGPRFQ96AM1 343 aa13.61□□□□□ -0.23
AC004540.1-203ENST00000421862 IGHV3OR16-13A0A075B7E8 117 aa13.6□□□□□ -0.23
AC004540.1-203ENST00000421862 IGHV3-74A0A0B4J1X5 117 aa13.6□□□□□ -0.23
AC004540.1-203ENST00000421862 INS-IGF2F8WCM5 200 aa13.6□□□□□ -0.23
AC004540.1-203ENST00000421862 DFFBO76075 338 aa13.6□□□□□ -0.23
AC004540.1-203ENST00000421862 CA1P00915 261 aaPredicted RBP13.6□□□□□ -0.23
AC004540.1-203ENST00000421862 IGHV3-48P01763 117 aa13.6□□□□□ -0.23
AC004540.1-203ENST00000421862 S100GP29377 79 aa13.6□□□□□ -0.23
AC004540.1-203ENST00000421862 TCTAP57738 103 aa13.6□□□□□ -0.23
AC004540.1-203ENST00000421862 HSPE1P61604 102 aaKnown RBP13.6□□□□□ -0.23
AC004540.1-203ENST00000421862 PVRIGQ6DKI7 326 aa13.6□□□□□ -0.23
AC004540.1-203ENST00000421862 GBGT1Q8N5D6 347 aa13.6□□□□□ -0.23
AC004540.1-203ENST00000421862 OR4A16Q8NH70 328 aa13.6□□□□□ -0.23
AC004540.1-203ENST00000421862 APOHP02749 345 aaPredicted RBP13.59□□□□□ -0.23
AC004540.1-203ENST00000421862 EIF4EP06730 217 aaKnown RBP13.59□□□□□ -0.23
AC004540.1-203ENST00000421862 P0C879 139 aa13.59□□□□□ -0.23
AC004540.1-203ENST00000421862 PAFAH1B2P68402 229 aa13.59□□□□□ -0.23
AC004540.1-203ENST00000421862 LILRB2Q8N423 598 aa13.59□□□□□ -0.23
AC004540.1-203ENST00000421862 YIPF6Q96EC8 236 aa13.59□□□□□ -0.23
AC004540.1-203ENST00000421862 MS4A6AQ9H2W1 248 aa13.59□□□□□ -0.23
AC004540.1-203ENST00000421862 SCPEP1Q9HB40 452 aa13.59□□□□□ -0.23
AC004540.1-203ENST00000421862 PRR20EP86478 221 aa13.58□□□□□ -0.24
AC004540.1-203ENST00000421862 PRR20CP86479 221 aa13.58□□□□□ -0.24
AC004540.1-203ENST00000421862 PRR20DP86480 221 aa13.58□□□□□ -0.24
AC004540.1-203ENST00000421862 PRR20BP86481 221 aa13.58□□□□□ -0.24
AC004540.1-203ENST00000421862 PRR20AP86496 221 aa13.58□□□□□ -0.24
AC004540.1-203ENST00000421862 ZNF600Q6ZNG1 722 aa13.58□□□□□ -0.24
AC004540.1-203ENST00000421862 FAM24BQ8N5W8 94 aa13.58□□□□□ -0.24
AC004540.1-203ENST00000421862 Q8NAQ8 132 aa13.58□□□□□ -0.24
AC004540.1-203ENST00000421862 PINX1Q96BK5 328 aaKnown RBP13.58□□□□□ -0.24
AC004540.1-203ENST00000421862 HRH4Q9H3N8 390 aa13.58□□□□□ -0.24
AC004540.1-203ENST00000421862 FBXL17Q9UF56 701 aa13.58□□□□□ -0.24
AC004540.1-203ENST00000421862 PUS1Q9Y606 427 aaKnown RBP eCLIP13.58□□□□□ -0.24
AC004540.1-203ENST00000421862 KIAA1109Q2LD37 5005 aa13.57□□□□□ -0.24
AC004540.1-203ENST00000421862 ST8SIA3O43173 380 aa13.57□□□□□ -0.24
AC004540.1-203ENST00000421862 RCVRNP35243 200 aa13.57□□□□□ -0.24
AC004540.1-203ENST00000421862 NPBWR1P48145 328 aa13.57□□□□□ -0.24
AC004540.1-203ENST00000421862 DEFB131AP59861 70 aa13.57□□□□□ -0.24
AC004540.1-203ENST00000421862 RND3P61587 244 aa13.57□□□□□ -0.24
AC004540.1-203ENST00000421862 TSPAN5P62079 268 aa13.57□□□□□ -0.24
AC004540.1-203ENST00000421862 ERHP84090 104 aaKnown RBP13.57□□□□□ -0.24
AC004540.1-203ENST00000421862 TMEM187Q14656 261 aa13.57□□□□□ -0.24
AC004540.1-203ENST00000421862 C2CD4CQ8TF44 421 aa13.57□□□□□ -0.24
AC004540.1-203ENST00000421862 PCLOQ9Y6V0 5065 aa13.57□□□□□ -0.24
AC004540.1-203ENST00000421862 A0A1B0GU03 582 aa13.56□□□□□ -0.24
AC004540.1-203ENST00000421862 IGKV1-5P01602 117 aa13.56□□□□□ -0.24
AC004540.1-203ENST00000421862 APOA1P02647 267 aa13.56□□□□□ -0.24
AC004540.1-203ENST00000421862 IFNA4P05014 189 aa13.56□□□□□ -0.24
AC004540.1-203ENST00000421862 GIG44P09565 113 aaPredicted RBP13.56□□□□□ -0.24
AC004540.1-203ENST00000421862 LEMD1Q68G75 181 aa13.56□□□□□ -0.24
AC004540.1-203ENST00000421862 DUSP18Q8NEJ0 188 aa13.56□□□□□ -0.24
AC004540.1-203ENST00000421862 CORTO00230 105 aa13.55□□□□□ -0.24
AC004540.1-203ENST00000421862 IZUMO4Q1ZYL8 232 aa13.55□□□□□ -0.24
AC004540.1-203ENST00000421862 SPINK9Q5DT21 86 aa13.55□□□□□ -0.24
AC004540.1-203ENST00000421862 TRPT1Q86TN4 253 aaKnown RBP13.55□□□□□ -0.24
AC004540.1-203ENST00000421862 LHFPL1Q86WI0 220 aa13.55□□□□□ -0.24
AC004540.1-203ENST00000421862 ZNF486Q96H40 463 aaPredicted RBP13.55□□□□□ -0.24
AC004540.1-203ENST00000421862 TMEM231Q9H6L2 316 aa13.55□□□□□ -0.24
AC004540.1-203ENST00000421862 APLNQ9ULZ1 77 aa13.55□□□□□ -0.24
AC004540.1-203ENST00000421862 C11orf94C9JXX5 98 aa13.54□□□□□ -0.24
AC004540.1-203ENST00000421862 DEFB4AO15263 64 aa13.54□□□□□ -0.24
AC004540.1-203ENST00000421862 TMEM50AO95807 157 aa13.54□□□□□ -0.24
AC004540.1-203ENST00000421862 RNASE2P10153 161 aaKnown RBP13.54□□□□□ -0.24
AC004540.1-203ENST00000421862 LSM3P62310 102 aaKnown RBP13.54□□□□□ -0.24
AC004540.1-203ENST00000421862 TMEM41BQ5BJD5 291 aa13.54□□□□□ -0.24
AC004540.1-203ENST00000421862 GRAMD2BQ96HH9 432 aa13.54□□□□□ -0.24
AC004540.1-203ENST00000421862 A0A0B4J293 547 aa13.53□□□□□ -0.24
AC004540.1-203ENST00000421862 IGHV3-66A0A0C4DH42 116 aa13.53□□□□□ -0.24
AC004540.1-203ENST00000421862 K7EQG2 157 aa13.53□□□□□ -0.24
AC004540.1-203ENST00000421862 DNASE2O00115 360 aaPredicted RBP13.53□□□□□ -0.24
AC004540.1-203ENST00000421862 BSXQ3C1V8 233 aa13.53□□□□□ -0.24
AC004540.1-203ENST00000421862 SNX29P2Q8IUI4 249 aa13.53□□□□□ -0.24
AC004540.1-203ENST00000421862 SLC35G3Q8N808 338 aa13.53□□□□□ -0.24
AC004540.1-203ENST00000421862 TP53RKQ96S44 253 aa13.53□□□□□ -0.24
AC004540.1-203ENST00000421862 FNDC4Q9H6D8 234 aaPredicted RBP13.53□□□□□ -0.24
AC004540.1-203ENST00000421862 MRPL36Q9P0J6 103 aaKnown RBP13.53□□□□□ -0.24
AC004540.1-203ENST00000421862 FAT2Q9NYQ8 4349 aa13.53□□□□□ -0.24
AC004540.1-203ENST00000421862 ZNF705EA8MWA4 302 aaPredicted RBP13.52□□□□□ -0.25
AC004540.1-203ENST00000421862 CLN5O75503 358 aa13.52□□□□□ -0.25
AC004540.1-203ENST00000421862 SPP1P10451 314 aa13.52□□□□□ -0.25
AC004540.1-203ENST00000421862 C4BPBP20851 252 aa13.52□□□□□ -0.25
AC004540.1-203ENST00000421862 CRYBB3P26998 211 aa13.52□□□□□ -0.25
AC004540.1-203ENST00000421862 SNCAP37840 140 aa13.52□□□□□ -0.25
AC004540.1-203ENST00000421862 STHQ8IWL8 128 aa13.52□□□□□ -0.25
AC004540.1-203ENST00000421862 COMMD3Q9UBI1 195 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms