RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 CHRNA7P36544 502 aa10.5□□□□□ -0.73
LINC00642-201ENST00000419459 PCP4P48539 62 aa10.5□□□□□ -0.73
LINC00642-201ENST00000419459 ZNF585BQ52M93 769 aa10.5□□□□□ -0.73
LINC00642-201ENST00000419459 Q5PR19 223 aa10.5□□□□□ -0.73
LINC00642-201ENST00000419459 ZNF841Q6ZN19 808 aa10.5□□□□□ -0.73
LINC00642-201ENST00000419459 ZNF497Q6ZNH5 498 aa10.5□□□□□ -0.73
LINC00642-201ENST00000419459 OR4B1Q8NGF8 309 aa10.5□□□□□ -0.73
LINC00642-201ENST00000419459 H1FXQ92522 213 aaKnown RBP10.5□□□□□ -0.73
LINC00642-201ENST00000419459 CIB3Q96Q77 187 aaPredicted RBP10.5□□□□□ -0.73
LINC00642-201ENST00000419459 IGLV2-14P01704 120 aa10.49□□□□□ -0.73
LINC00642-201ENST00000419459 SSTR5P35346 364 aa10.49□□□□□ -0.73
LINC00642-201ENST00000419459 PRSS8Q16651 343 aa10.49□□□□□ -0.73
LINC00642-201ENST00000419459 IZUMO4Q1ZYL8 232 aa10.49□□□□□ -0.73
LINC00642-201ENST00000419459 OR10P1Q8NGE3 313 aa10.49□□□□□ -0.73
LINC00642-201ENST00000419459 OR13A1Q8NGR1 328 aa10.49□□□□□ -0.73
LINC00642-201ENST00000419459 MRGPRDQ8TDS7 321 aa10.49□□□□□ -0.73
LINC00642-201ENST00000419459 SFRP2Q96HF1 295 aa10.49□□□□□ -0.73
LINC00642-201ENST00000419459 PIMREGQ9BSJ6 248 aa10.49□□□□□ -0.73
LINC00642-201ENST00000419459 TRAPPC2LQ9UL33 140 aa10.49□□□□□ -0.73
LINC00642-201ENST00000419459 MDFIC2A0A1B0GVS7 189 aa10.48□□□□□ -0.73
LINC00642-201ENST00000419459 MGST3O14880 152 aa10.48□□□□□ -0.73
LINC00642-201ENST00000419459 NDUFB3O43676 98 aa10.48□□□□□ -0.73
LINC00642-201ENST00000419459 CDC34P49427 236 aaPredicted RBP10.48□□□□□ -0.73
LINC00642-201ENST00000419459 TMEM155Q4W5P6 130 aa10.48□□□□□ -0.73
LINC00642-201ENST00000419459 LRRC10Q5BKY1 277 aa10.48□□□□□ -0.73
LINC00642-201ENST00000419459 CST9LP1Q5W188 147 aa10.48□□□□□ -0.73
LINC00642-201ENST00000419459 OR8G2PQ6IF36 304 aa10.48□□□□□ -0.73
LINC00642-201ENST00000419459 Q6ZWC4 215 aa10.48□□□□□ -0.73
LINC00642-201ENST00000419459 TCF23Q7RTU1 214 aa10.48□□□□□ -0.73
LINC00642-201ENST00000419459 ZBTB34Q8NCN2 500 aa10.48□□□□□ -0.73
LINC00642-201ENST00000419459 SGMS2Q8NHU3 365 aa10.48□□□□□ -0.73
LINC00642-201ENST00000419459 NPCDR1Q9BY65 106 aa10.48□□□□□ -0.73
LINC00642-201ENST00000419459 AURKAIP1Q9NWT8 199 aaPredicted RBP10.48□□□□□ -0.73
LINC00642-201ENST00000419459 KAAG1Q9UBP8 84 aa10.48□□□□□ -0.73
LINC00642-201ENST00000419459 CLN8Q9UBY8 286 aa10.48□□□□□ -0.73
LINC00642-201ENST00000419459 CSPG4Q6UVK1 2322 aa10.48□□□□□ -0.73
LINC00642-201ENST00000419459 CR1P17927 2039 aa10.48□□□□□ -0.73
LINC00642-201ENST00000419459 TRBV9A0A0B4J1U6 114 aa10.48□□□□□ -0.73
LINC00642-201ENST00000419459 NPPCP23582 126 aa10.48□□□□□ -0.73
LINC00642-201ENST00000419459 ADMP35318 185 aa10.48□□□□□ -0.73
LINC00642-201ENST00000419459 Q0VG73 95 aa10.48□□□□□ -0.73
LINC00642-201ENST00000419459 FAM53AQ6NSI3 398 aaPredicted RBP10.48□□□□□ -0.73
LINC00642-201ENST00000419459 KRTAP1-3Q8IUG1 177 aa10.48□□□□□ -0.73
LINC00642-201ENST00000419459 OR5AU1Q8NGC0 362 aa10.48□□□□□ -0.73
LINC00642-201ENST00000419459 OR8B3Q8NGG8 313 aa10.48□□□□□ -0.73
LINC00642-201ENST00000419459 OR8B2Q96RD0 313 aa10.48□□□□□ -0.73
LINC00642-201ENST00000419459 BEX4Q9NWD9 120 aaPredicted RBP10.48□□□□□ -0.73
LINC00642-201ENST00000419459 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.48□□□□□ -0.73
LINC00642-201ENST00000419459 TMEM30CPA0ZSE6 113 aa10.47□□□□□ -0.73
LINC00642-201ENST00000419459 ODAMA1E959 279 aa10.47□□□□□ -0.73
LINC00642-201ENST00000419459 PMS2P5A8MQ11 134 aa10.47□□□□□ -0.73
LINC00642-201ENST00000419459 VWC2LB2RUY7 222 aa10.47□□□□□ -0.73
LINC00642-201ENST00000419459 NUPR1O60356 82 aa10.47□□□□□ -0.73
LINC00642-201ENST00000419459 FSTL3O95633 263 aa10.47□□□□□ -0.73
LINC00642-201ENST00000419459 GNB1P62873 340 aa10.47□□□□□ -0.73
LINC00642-201ENST00000419459 RPL31P62899 125 aaKnown RBP10.47□□□□□ -0.73
LINC00642-201ENST00000419459 RFESDQ8TAC1 157 aa10.47□□□□□ -0.73
LINC00642-201ENST00000419459 GATAD1Q8WUU5 269 aa10.47□□□□□ -0.73
LINC00642-201ENST00000419459 IL1F10Q8WWZ1 152 aa10.47□□□□□ -0.73
LINC00642-201ENST00000419459 PATZ1Q9HBE1 687 aaKnown RBP10.47□□□□□ -0.73
LINC00642-201ENST00000419459 CRISP2P16562 243 aa10.46□□□□□ -0.73
LINC00642-201ENST00000419459 ZFP36P26651 326 aaKnown RBP10.46□□□□□ -0.73
LINC00642-201ENST00000419459 DLX1P56177 255 aa10.46□□□□□ -0.73
LINC00642-201ENST00000419459 RPL19P84098 196 aaKnown RBP10.46□□□□□ -0.73
LINC00642-201ENST00000419459 PRB3Q04118 309 aaPredicted RBP10.46□□□□□ -0.73
LINC00642-201ENST00000419459 WFDC11Q8NEX6 87 aa10.46□□□□□ -0.73
LINC00642-201ENST00000419459 PPP1R35Q8TAP8 253 aa10.46□□□□□ -0.73
LINC00642-201ENST00000419459 SSBP3Q9BWW4 388 aaPredicted RBP10.46□□□□□ -0.73
LINC00642-201ENST00000419459 FAM234AQ9H0X4 552 aa10.46□□□□□ -0.73
LINC00642-201ENST00000419459 CUBNO60494 3623 aa10.46□□□□□ -0.73
LINC00642-201ENST00000419459 ABCA1O95477 2261 aa10.46□□□□□ -0.74
LINC00642-201ENST00000419459 NDUFS8O00217 210 aa10.46□□□□□ -0.74
LINC00642-201ENST00000419459 HMGB3O15347 200 aaKnown RBP10.46□□□□□ -0.74
LINC00642-201ENST00000419459 P0C879 139 aa10.46□□□□□ -0.74
LINC00642-201ENST00000419459 CCL3L1P16619 93 aa10.46□□□□□ -0.74
LINC00642-201ENST00000419459 LMO4P61968 165 aa10.46□□□□□ -0.74
LINC00642-201ENST00000419459 OR5I1Q13606 314 aa10.46□□□□□ -0.74
LINC00642-201ENST00000419459 LTC4SQ16873 150 aa10.46□□□□□ -0.74
LINC00642-201ENST00000419459 SLC35E4Q6ICL7 350 aa10.46□□□□□ -0.74
LINC00642-201ENST00000419459 TCTEX1D1Q8N7M0 179 aa10.46□□□□□ -0.74
LINC00642-201ENST00000419459 Q96MF0 132 aa10.46□□□□□ -0.74
LINC00642-201ENST00000419459 RNF2Q99496 336 aa10.46□□□□□ -0.74
LINC00642-201ENST00000419459 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.46□□□□□ -0.74
LINC00642-201ENST00000419459 C22orf46C9J442 243 aa10.45□□□□□ -0.74
LINC00642-201ENST00000419459 C12orf77C9JDV5 145 aa10.45□□□□□ -0.74
LINC00642-201ENST00000419459 IGHV3-7P01780 117 aa10.45□□□□□ -0.74
LINC00642-201ENST00000419459 UTF1Q5T230 341 aa10.45□□□□□ -0.74
LINC00642-201ENST00000419459 DMRTA1Q5VZB9 504 aa10.45□□□□□ -0.74
LINC00642-201ENST00000419459 OR10G8Q8NGN5 311 aa10.45□□□□□ -0.74
LINC00642-201ENST00000419459 NINJ1Q92982 152 aa10.45□□□□□ -0.74
LINC00642-201ENST00000419459 MBD6Q96DN6 1003 aa10.45□□□□□ -0.74
LINC00642-201ENST00000419459 SLC35E1Q96K37 410 aa10.45□□□□□ -0.74
LINC00642-201ENST00000419459 HSPB9Q9BQS6 159 aa10.45□□□□□ -0.74
LINC00642-201ENST00000419459 MBNL3Q9NUK0 354 aaKnown RBP10.45□□□□□ -0.74
LINC00642-201ENST00000419459 TP53TG3Q9ULZ0 132 aa10.45□□□□□ -0.74
LINC00642-201ENST00000419459 SLC45A2Q9UMX9 530 aa10.45□□□□□ -0.74
LINC00642-201ENST00000419459 RBM7Q9Y580 266 aaKnown RBP10.45□□□□□ -0.74
LINC00642-201ENST00000419459 LY96Q9Y6Y9 160 aa10.45□□□□□ -0.74
LINC00642-201ENST00000419459 RNF223E7ERA6 249 aa10.45□□□□□ -0.74
LINC00642-201ENST00000419459 MPDU1O75352 247 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms