RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 NDUFA3O95167 84 aa10.45□□□□□ -0.74
HLA-DMB-258ENST00000418107 FBP1P09467 338 aa10.45□□□□□ -0.74
HLA-DMB-258ENST00000418107 OR2G3Q8NGZ4 309 aa10.45□□□□□ -0.74
HLA-DMB-258ENST00000418107 LRRC20Q8TCA0 184 aa10.45□□□□□ -0.74
HLA-DMB-258ENST00000418107 RNF141Q8WVD5 230 aa10.45□□□□□ -0.74
HLA-DMB-258ENST00000418107 RASL11BQ9BPW5 248 aa10.45□□□□□ -0.74
HLA-DMB-258ENST00000418107 ARV1Q9H2C2 271 aa10.45□□□□□ -0.74
HLA-DMB-258ENST00000418107 PMS2P5A8MQ11 134 aa10.44□□□□□ -0.74
HLA-DMB-258ENST00000418107 E7EUB6 86 aa10.44□□□□□ -0.74
HLA-DMB-258ENST00000418107 PRH1P02810 166 aa10.44□□□□□ -0.74
HLA-DMB-258ENST00000418107 REG1AP05451 166 aa10.44□□□□□ -0.74
HLA-DMB-258ENST00000418107 SEC11BP0C7V7 166 aa10.44□□□□□ -0.74
HLA-DMB-258ENST00000418107 APELAP0DMC3 54 aa10.44□□□□□ -0.74
HLA-DMB-258ENST00000418107 FGF7P21781 194 aa10.44□□□□□ -0.74
HLA-DMB-258ENST00000418107 ATP6V0CP27449 155 aa10.44□□□□□ -0.74
HLA-DMB-258ENST00000418107 FXYD3Q14802 87 aa10.44□□□□□ -0.74
HLA-DMB-258ENST00000418107 MRGPRG-AS1Q2M3A8 158 aa10.44□□□□□ -0.74
HLA-DMB-258ENST00000418107 C2orf83Q53S99 150 aa10.44□□□□□ -0.74
HLA-DMB-258ENST00000418107 C9orf139Q6ZV77 190 aa10.44□□□□□ -0.74
HLA-DMB-258ENST00000418107 SLC7A5P1Q8MH63 180 aa10.44□□□□□ -0.74
HLA-DMB-258ENST00000418107 ZNF709Q8N972 641 aa10.44□□□□□ -0.74
HLA-DMB-258ENST00000418107 SSMEM1Q8WWF3 244 aa10.44□□□□□ -0.74
HLA-DMB-258ENST00000418107 WFDC12Q8WWY7 111 aa10.44□□□□□ -0.74
HLA-DMB-258ENST00000418107 SRSF12Q8WXF0 261 aaKnown RBP10.44□□□□□ -0.74
HLA-DMB-258ENST00000418107 SSX3Q99909 188 aa10.44□□□□□ -0.74
HLA-DMB-258ENST00000418107 ZNF705EA8MWA4 302 aaPredicted RBP10.43□□□□□ -0.74
HLA-DMB-258ENST00000418107 HOXA3O43365 443 aaPredicted RBP10.43□□□□□ -0.74
HLA-DMB-258ENST00000418107 RNASE2P10153 161 aaKnown RBP10.43□□□□□ -0.74
HLA-DMB-258ENST00000418107 BPIFB3P59826 476 aa10.43□□□□□ -0.74
HLA-DMB-258ENST00000418107 DLK1P80370 383 aa10.43□□□□□ -0.74
HLA-DMB-258ENST00000418107 LRRC75BQ2VPJ9 315 aa10.43□□□□□ -0.74
HLA-DMB-258ENST00000418107 FBLN7Q53RD9 439 aa10.43□□□□□ -0.74
HLA-DMB-258ENST00000418107 TMEM182Q6ZP80 229 aaPredicted RBP10.43□□□□□ -0.74
HLA-DMB-258ENST00000418107 Q8N6K4 173 aa10.43□□□□□ -0.74
HLA-DMB-258ENST00000418107 GGACTQ9BVM4 153 aa10.43□□□□□ -0.74
HLA-DMB-258ENST00000418107 MEGF9Q9H1U4 602 aa10.43□□□□□ -0.74
HLA-DMB-258ENST00000418107 SH3BGRL3Q9H299 93 aa10.43□□□□□ -0.74
HLA-DMB-258ENST00000418107 TNFRSF19Q9NS68 423 aa10.43□□□□□ -0.74
HLA-DMB-258ENST00000418107 FAM181BA6NEQ2 426 aa10.42□□□□□ -0.74
HLA-DMB-258ENST00000418107 CGB1A6NKQ9 187 aa10.42□□□□□ -0.74
HLA-DMB-258ENST00000418107 INS-IGF2F8WCM5 200 aa10.42□□□□□ -0.74
HLA-DMB-258ENST00000418107 SPP1P10451 314 aa10.42□□□□□ -0.74
HLA-DMB-258ENST00000418107 CAMLGP49069 296 aa10.42□□□□□ -0.74
HLA-DMB-258ENST00000418107 SULT1A2P50226 295 aa10.42□□□□□ -0.74
HLA-DMB-258ENST00000418107 RUNX1Q01196 453 aa10.42□□□□□ -0.74
HLA-DMB-258ENST00000418107 AKR1C1Q04828 323 aa10.42□□□□□ -0.74
HLA-DMB-258ENST00000418107 WT1-ASQ06250 92 aa10.42□□□□□ -0.74
HLA-DMB-258ENST00000418107 DEFB112Q30KQ8 113 aa10.42□□□□□ -0.74
HLA-DMB-258ENST00000418107 AKR1C8PQ5T2L2 129 aa10.42□□□□□ -0.74
HLA-DMB-258ENST00000418107 HSD17B13Q7Z5P4 300 aaPredicted RBP10.42□□□□□ -0.74
HLA-DMB-258ENST00000418107 TMEM170AQ8WVE7 144 aa10.42□□□□□ -0.74
HLA-DMB-258ENST00000418107 SLC25A33Q9BSK2 321 aa10.42□□□□□ -0.74
HLA-DMB-258ENST00000418107 WDR61Q9GZS3 305 aaKnown RBP10.42□□□□□ -0.74
HLA-DMB-258ENST00000418107 PFDN2Q9UHV9 154 aa10.42□□□□□ -0.74
HLA-DMB-258ENST00000418107 A0A1B0GUS0 222 aa10.41□□□□□ -0.74
HLA-DMB-258ENST00000418107 RPS10-NUDT3A0A1W2PQS6 291 aa10.41□□□□□ -0.74
HLA-DMB-258ENST00000418107 NMBP08949 121 aa10.41□□□□□ -0.74
HLA-DMB-258ENST00000418107 BLOC1S1P78537 153 aa10.41□□□□□ -0.74
HLA-DMB-258ENST00000418107 LY6EQ16553 131 aa10.41□□□□□ -0.74
HLA-DMB-258ENST00000418107 BTNL8Q6UX41 500 aa10.41□□□□□ -0.74
HLA-DMB-258ENST00000418107 TMEM219Q86XT9 240 aa10.41□□□□□ -0.74
HLA-DMB-258ENST00000418107 OR4F5Q8NH21 305 aa10.41□□□□□ -0.74
HLA-DMB-258ENST00000418107 SLC35E1Q96K37 410 aa10.41□□□□□ -0.74
HLA-DMB-258ENST00000418107 RSG1Q9BU20 258 aa10.41□□□□□ -0.74
HLA-DMB-258ENST00000418107 PARD6GQ9BYG4 376 aaPredicted RBP10.41□□□□□ -0.74
HLA-DMB-258ENST00000418107 FBXO7Q9Y3I1 522 aa10.41□□□□□ -0.74
HLA-DMB-258ENST00000418107 A0A1B0GW64 132 aa10.4□□□□□ -0.74
HLA-DMB-258ENST00000418107 IGLC7A0M8Q6 106 aa10.4□□□□□ -0.74
HLA-DMB-258ENST00000418107 C17orf112F2Z3M2 114 aa10.4□□□□□ -0.74
HLA-DMB-258ENST00000418107 H3BUX3 64 aa10.4□□□□□ -0.74
HLA-DMB-258ENST00000418107 DEFA4P12838 97 aa10.4□□□□□ -0.74
HLA-DMB-258ENST00000418107 RAB5CP51148 216 aa10.4□□□□□ -0.74
HLA-DMB-258ENST00000418107 CX3CL1P78423 397 aa10.4□□□□□ -0.74
HLA-DMB-258ENST00000418107 RAB31Q13636 194 aa10.4□□□□□ -0.74
HLA-DMB-258ENST00000418107 ZNF562Q6V9R5 426 aa10.4□□□□□ -0.74
HLA-DMB-258ENST00000418107 Q8N9W7 124 aa10.4□□□□□ -0.74
HLA-DMB-258ENST00000418107 FAM213BQ8TBF2 198 aa10.4□□□□□ -0.74
HLA-DMB-258ENST00000418107 ARPC1AQ92747 370 aa10.4□□□□□ -0.74
HLA-DMB-258ENST00000418107 MISP3Q96FF7 219 aa10.4□□□□□ -0.74
HLA-DMB-258ENST00000418107 P2RX4Q99571 388 aa10.4□□□□□ -0.74
HLA-DMB-258ENST00000418107 CITED1Q99966 193 aa10.4□□□□□ -0.74
HLA-DMB-258ENST00000418107 SRSF8Q9BRL6 282 aaKnown RBP10.4□□□□□ -0.74
HLA-DMB-258ENST00000418107 NPVFQ9HCQ7 196 aa10.4□□□□□ -0.74
HLA-DMB-258ENST00000418107 MOB4Q9Y3A3 225 aa10.4□□□□□ -0.74
HLA-DMB-258ENST00000418107 RFNGQ9Y644 331 aa10.4□□□□□ -0.74
HLA-DMB-258ENST00000418107 LINC00862A6NCI5 91 aa10.39□□□□□ -0.75
HLA-DMB-258ENST00000418107 TEX22C9J3V5 150 aa10.39□□□□□ -0.75
HLA-DMB-258ENST00000418107 UMAD1C9J7I0 102 aa10.39□□□□□ -0.75
HLA-DMB-258ENST00000418107 M0QZ24 198 aa10.39□□□□□ -0.75
HLA-DMB-258ENST00000418107 FGF16O43320 207 aa10.39□□□□□ -0.75
HLA-DMB-258ENST00000418107 ATP6V1G1O75348 118 aa10.39□□□□□ -0.75
HLA-DMB-258ENST00000418107 CRYBA1P05813 215 aa10.39□□□□□ -0.75
HLA-DMB-258ENST00000418107 AREGP15514 252 aa10.39□□□□□ -0.75
HLA-DMB-258ENST00000418107 OPRK1P41145 380 aa10.39□□□□□ -0.75
HLA-DMB-258ENST00000418107 ZNF616Q08AN1 781 aa10.39□□□□□ -0.75
HLA-DMB-258ENST00000418107 VWC2Q2TAL6 325 aa10.39□□□□□ -0.75
HLA-DMB-258ENST00000418107 BSXQ3C1V8 233 aa10.39□□□□□ -0.75
HLA-DMB-258ENST00000418107 COMMD7Q86VX2 200 aa10.39□□□□□ -0.75
HLA-DMB-258ENST00000418107 RNASEH2CQ8TDP1 164 aaKnown RBP10.39□□□□□ -0.75
HLA-DMB-258ENST00000418107 SAT2Q96F10 170 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms