RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 C10orf55Q5SWW7 151 aa11.78□□□□□ -0.52
HDAC9-208ENST00000417496 BTF3L4Q96K17 158 aa11.78□□□□□ -0.52
HDAC9-208ENST00000417496 POLEQ07864 2286 aa11.77□□□□□ -0.52
HDAC9-208ENST00000417496 TANC2Q9HCD6 1990 aa11.77□□□□□ -0.53
HDAC9-208ENST00000417496 C9JCJ5 164 aa11.77□□□□□ -0.53
HDAC9-208ENST00000417496 CEACAM4O75871 244 aa11.77□□□□□ -0.53
HDAC9-208ENST00000417496 MGST1P10620 155 aaKnown RBP11.77□□□□□ -0.53
HDAC9-208ENST00000417496 CDKN1AP38936 164 aa11.77□□□□□ -0.53
HDAC9-208ENST00000417496 LHFPL4Q7Z7J7 247 aa11.77□□□□□ -0.53
HDAC9-208ENST00000417496 HARBI1Q96MB7 349 aa11.77□□□□□ -0.53
HDAC9-208ENST00000417496 C1orf185Q5T7R7 199 aa11.77□□□□□ -0.53
HDAC9-208ENST00000417496 BAGE3Q86Y29 109 aa11.77□□□□□ -0.53
HDAC9-208ENST00000417496 BAGE2Q86Y30 109 aa11.77□□□□□ -0.53
HDAC9-208ENST00000417496 HSPB9Q9BQS6 159 aa11.77□□□□□ -0.53
HDAC9-208ENST00000417496 C2orf88Q9BSF0 95 aa11.77□□□□□ -0.53
HDAC9-208ENST00000417496 TECRQ9NZ01 308 aaKnown RBP11.77□□□□□ -0.53
HDAC9-208ENST00000417496 ZNF257Q9Y2Q1 563 aa11.77□□□□□ -0.53
HDAC9-208ENST00000417496 IRF2P14316 349 aa11.76□□□□□ -0.53
HDAC9-208ENST00000417496 SELENOTP62341 195 aa11.76□□□□□ -0.53
HDAC9-208ENST00000417496 TOMM20LQ6UXN7 152 aa11.76□□□□□ -0.53
HDAC9-208ENST00000417496 CORO2AQ92828 525 aa11.76□□□□□ -0.53
HDAC9-208ENST00000417496 SNHG12Q9BXW3 62 aa11.76□□□□□ -0.53
HDAC9-208ENST00000417496 TMEM106BQ9NUM4 274 aa11.76□□□□□ -0.53
HDAC9-208ENST00000417496 SLC25A10Q9UBX3 287 aaPredicted RBP11.76□□□□□ -0.53
HDAC9-208ENST00000417496 SH3BGRL2Q9UJC5 107 aa11.76□□□□□ -0.53
HDAC9-208ENST00000417496 FAM103A1Q9BTL3 118 aaKnown RBP11.76□□□□□ -0.53
HDAC9-208ENST00000417496 COMMD5Q9GZQ3 224 aa11.76□□□□□ -0.53
HDAC9-208ENST00000417496 NCOR1P1Q9H4R4 102 aa11.76□□□□□ -0.53
HDAC9-208ENST00000417496 RAB9BQ9NP90 201 aa11.76□□□□□ -0.53
HDAC9-208ENST00000417496 SERTAD4Q9NUC0 356 aa11.76□□□□□ -0.53
HDAC9-208ENST00000417496 ZZEF1O43149 2961 aa11.75□□□□□ -0.53
HDAC9-208ENST00000417496 hADV38S2A0JD32 116 aa11.75□□□□□ -0.53
HDAC9-208ENST00000417496 PYYP10082 97 aa11.75□□□□□ -0.53
HDAC9-208ENST00000417496 C2orf83Q53S99 150 aa11.75□□□□□ -0.53
HDAC9-208ENST00000417496 MRPL54Q6P161 138 aaKnown RBP11.75□□□□□ -0.53
HDAC9-208ENST00000417496 WFDC8Q8IUA0 241 aa11.75□□□□□ -0.53
HDAC9-208ENST00000417496 BEND2Q8NDZ0 799 aa11.75□□□□□ -0.53
HDAC9-208ENST00000417496 SLC25A33Q9BSK2 321 aa11.75□□□□□ -0.53
HDAC9-208ENST00000417496 TMEM167BQ9NRX6 74 aa11.75□□□□□ -0.53
HDAC9-208ENST00000417496 NAT8BQ9UHF3 227 aa11.75□□□□□ -0.53
HDAC9-208ENST00000417496 RNF114Q9Y508 228 aa11.75□□□□□ -0.53
HDAC9-208ENST00000417496 TNFSF4P23510 183 aa11.75□□□□□ -0.53
HDAC9-208ENST00000417496 PRB3Q04118 309 aaPredicted RBP11.75□□□□□ -0.53
HDAC9-208ENST00000417496 CD69Q07108 199 aa11.75□□□□□ -0.53
HDAC9-208ENST00000417496 C1orf194Q5T5A4 169 aa11.75□□□□□ -0.53
HDAC9-208ENST00000417496 TMEM200BQ69YZ2 307 aa11.75□□□□□ -0.53
HDAC9-208ENST00000417496 H1FXQ92522 213 aaKnown RBP11.75□□□□□ -0.53
HDAC9-208ENST00000417496 FAM168AQ92567 244 aa11.75□□□□□ -0.53
HDAC9-208ENST00000417496 SSBP3Q9BWW4 388 aaPredicted RBP11.75□□□□□ -0.53
HDAC9-208ENST00000417496 LINC00574Q9H8X3 128 aa11.75□□□□□ -0.53
HDAC9-208ENST00000417496 GNB4Q9HAV0 340 aa11.75□□□□□ -0.53
HDAC9-208ENST00000417496 ZGRF1Q86YA3 2104 aa11.74□□□□□ -0.53
HDAC9-208ENST00000417496 H0YJW9 148 aa11.74□□□□□ -0.53
HDAC9-208ENST00000417496 PLAUP00749 431 aa11.74□□□□□ -0.53
HDAC9-208ENST00000417496 IGLV2-8P01709 118 aa11.74□□□□□ -0.53
HDAC9-208ENST00000417496 REG1AP05451 166 aa11.74□□□□□ -0.53
HDAC9-208ENST00000417496 WT1-ASQ06250 92 aa11.74□□□□□ -0.53
HDAC9-208ENST00000417496 TIGITQ495A1 244 aa11.74□□□□□ -0.53
HDAC9-208ENST00000417496 PRR31Q5SQ13 230 aa11.74□□□□□ -0.53
HDAC9-208ENST00000417496 CCL17Q92583 94 aa11.74□□□□□ -0.53
HDAC9-208ENST00000417496 FNDC4Q9H6D8 234 aaPredicted RBP11.74□□□□□ -0.53
HDAC9-208ENST00000417496 NDUFA4L2Q9NRX3 87 aa11.74□□□□□ -0.53
HDAC9-208ENST00000417496 TM4SF5O14894 197 aa11.74□□□□□ -0.53
HDAC9-208ENST00000417496 OR5G3P0C626 314 aa11.74□□□□□ -0.53
HDAC9-208ENST00000417496 APELAP0DMC3 54 aa11.74□□□□□ -0.53
HDAC9-208ENST00000417496 DLX1P56177 255 aa11.74□□□□□ -0.53
HDAC9-208ENST00000417496 RPL8P62917 257 aaKnown RBP11.74□□□□□ -0.53
HDAC9-208ENST00000417496 RUSC1-AS1Q66K80 236 aa11.74□□□□□ -0.53
HDAC9-208ENST00000417496 LYPD2Q6UXB3 125 aa11.74□□□□□ -0.53
HDAC9-208ENST00000417496 RBMXL3Q8N7X1 1067 aaKnown RBP11.74□□□□□ -0.53
HDAC9-208ENST00000417496 OR5B3Q8NH48 314 aa11.74□□□□□ -0.53
HDAC9-208ENST00000417496 VN1R17PQ8TDU5 208 aa11.74□□□□□ -0.53
HDAC9-208ENST00000417496 RITA1Q96K30 269 aa11.74□□□□□ -0.53
HDAC9-208ENST00000417496 SLC35E1Q96K37 410 aa11.74□□□□□ -0.53
HDAC9-208ENST00000417496 SFXN3Q9BWM7 321 aa11.74□□□□□ -0.53
HDAC9-208ENST00000417496 SLC25A2Q9BXI2 301 aa11.74□□□□□ -0.53
HDAC9-208ENST00000417496 SAMD10Q9BYL1 202 aa11.74□□□□□ -0.53
HDAC9-208ENST00000417496 BET1LQ9NYM9 111 aa11.74□□□□□ -0.53
HDAC9-208ENST00000417496 MRPL36Q9P0J6 103 aaKnown RBP11.74□□□□□ -0.53
HDAC9-208ENST00000417496 LINC00312Q9Y6C7 94 aa11.74□□□□□ -0.53
HDAC9-208ENST00000417496 TRAV34A0A0B4J273 112 aa11.73□□□□□ -0.53
HDAC9-208ENST00000417496 C8orf88P0DMB2 117 aa11.73□□□□□ -0.53
HDAC9-208ENST00000417496 TPPP2P59282 170 aa11.73□□□□□ -0.53
HDAC9-208ENST00000417496 Q6ZS92 163 aa11.73□□□□□ -0.53
HDAC9-208ENST00000417496 ZNF833PQ6ZTB9 187 aa11.73□□□□□ -0.53
HDAC9-208ENST00000417496 NPIPB3Q92617 1050 aa11.73□□□□□ -0.53
HDAC9-208ENST00000417496 FAM167A-AS1Q96KT0 104 aa11.73□□□□□ -0.53
HDAC9-208ENST00000417496 SGK494Q96LW2 274 aa11.73□□□□□ -0.53
HDAC9-208ENST00000417496 RCHY1Q96PM5 261 aa11.73□□□□□ -0.53
HDAC9-208ENST00000417496 PAM16Q9Y3D7 125 aa11.73□□□□□ -0.53
HDAC9-208ENST00000417496 LY96Q9Y6Y9 160 aa11.73□□□□□ -0.53
HDAC9-208ENST00000417496 CGB1A6NKQ9 187 aa11.73□□□□□ -0.53
HDAC9-208ENST00000417496 FNDC10F2Z333 226 aa11.73□□□□□ -0.53
HDAC9-208ENST00000417496 UBE2L3P68036 154 aaKnown RBP11.73□□□□□ -0.53
HDAC9-208ENST00000417496 ADIPOQQ15848 244 aa11.73□□□□□ -0.53
HDAC9-208ENST00000417496 TPTE2P1Q5T6R2 138 aa11.73□□□□□ -0.53
HDAC9-208ENST00000417496 TEX36Q5VZQ5 186 aa11.73□□□□□ -0.53
HDAC9-208ENST00000417496 OR5AU1Q8NGC0 362 aa11.73□□□□□ -0.53
HDAC9-208ENST00000417496 FLYWCH2Q96CP2 140 aaKnown RBP11.73□□□□□ -0.53
HDAC9-208ENST00000417496 CHODLQ9H9P2 273 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms