RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 KLF5Q13887 457 aaPredicted RBP17.74■□□□□ 0.43
SMARCB1-205ENST00000417137 ATP6V0BQ99437 205 aa17.74■□□□□ 0.43
SMARCB1-205ENST00000417137 ELOVL1Q9BW60 279 aa17.74■□□□□ 0.43
SMARCB1-205ENST00000417137 HSPB7Q9UBY9 170 aa17.74■□□□□ 0.43
SMARCB1-205ENST00000417137 ZMAT5Q9UDW3 170 aaKnown RBP17.74■□□□□ 0.43
SMARCB1-205ENST00000417137 S4R3C0 116 aa17.74■□□□□ 0.43
SMARCB1-205ENST00000417137 CORTO00230 105 aa17.73■□□□□ 0.43
SMARCB1-205ENST00000417137 BMPR1BO00238 502 aa17.73■□□□□ 0.43
SMARCB1-205ENST00000417137 ARL3P36405 182 aa17.73■□□□□ 0.43
SMARCB1-205ENST00000417137 HTR2BP41595 481 aa17.73■□□□□ 0.43
SMARCB1-205ENST00000417137 INSL3P51460 131 aa17.73■□□□□ 0.43
SMARCB1-205ENST00000417137 TNFRSF9Q07011 255 aa17.73■□□□□ 0.43
SMARCB1-205ENST00000417137 GGNBP1Q5YKI7 109 aa17.73■□□□□ 0.43
SMARCB1-205ENST00000417137 ZNF502Q8TBZ5 544 aa17.73■□□□□ 0.43
SMARCB1-205ENST00000417137 MITD1Q8WV92 249 aa17.73■□□□□ 0.43
SMARCB1-205ENST00000417137 CCDC140Q96MF4 163 aa17.73■□□□□ 0.43
SMARCB1-205ENST00000417137 GAR1Q9NY12 217 aaKnown RBP17.73■□□□□ 0.43
SMARCB1-205ENST00000417137 BEAN1Q3B7T3 259 aa17.72■□□□□ 0.43
SMARCB1-205ENST00000417137 KPRPQ5T749 579 aaPredicted RBP17.72■□□□□ 0.43
SMARCB1-205ENST00000417137 NOXA1Q86UR1 476 aa17.72■□□□□ 0.43
SMARCB1-205ENST00000417137 SCARB1Q8WTV0 552 aa17.72■□□□□ 0.43
SMARCB1-205ENST00000417137 C21orf62Q9NYP8 219 aa17.72■□□□□ 0.43
SMARCB1-205ENST00000417137 FAM90A26D6RGX4 464 aa17.71■□□□□ 0.43
SMARCB1-205ENST00000417137 PPP5D1E7EU14 171 aa17.71■□□□□ 0.43
SMARCB1-205ENST00000417137 K7EIM0 57 aa17.71■□□□□ 0.43
SMARCB1-205ENST00000417137 PITX3O75364 302 aa17.71■□□□□ 0.43
SMARCB1-205ENST00000417137 NXPH3O95157 252 aa17.71■□□□□ 0.43
SMARCB1-205ENST00000417137 RNASE2P10153 161 aaKnown RBP17.71■□□□□ 0.43
SMARCB1-205ENST00000417137 SYNJ2BPP57105 145 aa17.71■□□□□ 0.43
SMARCB1-205ENST00000417137 DUSP18Q8NEJ0 188 aa17.71■□□□□ 0.43
SMARCB1-205ENST00000417137 IGHV3-21A0A0B4J1V1 117 aa17.7■□□□□ 0.42
SMARCB1-205ENST00000417137 MED6O75586 246 aa17.7■□□□□ 0.42
SMARCB1-205ENST00000417137 MT-CO2P00403 227 aa17.7■□□□□ 0.42
SMARCB1-205ENST00000417137 ACSM6Q6P461 480 aa17.7■□□□□ 0.42
SMARCB1-205ENST00000417137 PLET1Q6UQ28 207 aa17.7■□□□□ 0.42
SMARCB1-205ENST00000417137 OR52B4Q8NGK2 314 aa17.7■□□□□ 0.42
SMARCB1-205ENST00000417137 DTD1Q8TEA8 209 aa17.7■□□□□ 0.42
SMARCB1-205ENST00000417137 ZNF431Q8TF32 576 aaPredicted RBP17.7■□□□□ 0.42
SMARCB1-205ENST00000417137 PINX1Q96BK5 328 aaKnown RBP17.7■□□□□ 0.42
SMARCB1-205ENST00000417137 OR4C12Q96R67 309 aa17.7■□□□□ 0.42
SMARCB1-205ENST00000417137 TXN2Q99757 166 aa17.7■□□□□ 0.42
SMARCB1-205ENST00000417137 RBKSQ9H477 322 aa17.7■□□□□ 0.42
SMARCB1-205ENST00000417137 U3KQ87 197 aa17.7■□□□□ 0.42
SMARCB1-205ENST00000417137 I3L2K1 104 aa17.69■□□□□ 0.42
SMARCB1-205ENST00000417137 SAP30O75446 220 aa17.69■□□□□ 0.42
SMARCB1-205ENST00000417137 ADAP1O75689 374 aa17.69■□□□□ 0.42
SMARCB1-205ENST00000417137 OR2C1O95371 312 aa17.69■□□□□ 0.42
SMARCB1-205ENST00000417137 GPR183P32249 361 aa17.69■□□□□ 0.42
SMARCB1-205ENST00000417137 MFAP4P55083 255 aa17.69■□□□□ 0.42
SMARCB1-205ENST00000417137 BSXQ3C1V8 233 aa17.69■□□□□ 0.42
SMARCB1-205ENST00000417137 FAM106AQ4KMX7 169 aa17.69■□□□□ 0.42
SMARCB1-205ENST00000417137 PVRIGQ6DKI7 326 aa17.69■□□□□ 0.42
SMARCB1-205ENST00000417137 SPSB3Q6PJ21 355 aa17.69■□□□□ 0.42
SMARCB1-205ENST00000417137 GPHB5Q86YW7 130 aa17.69■□□□□ 0.42
SMARCB1-205ENST00000417137 OR9G4Q8NGQ1 327 aa17.69■□□□□ 0.42
SMARCB1-205ENST00000417137 BSCL2Q96G97 398 aaPredicted RBP17.69■□□□□ 0.42
SMARCB1-205ENST00000417137 PEMTQ9UBM1 199 aa17.69■□□□□ 0.42
SMARCB1-205ENST00000417137 ATP5IP56385 69 aaPredicted RBP17.68■□□□□ 0.42
SMARCB1-205ENST00000417137 DEFA6Q01524 100 aa17.68■□□□□ 0.42
SMARCB1-205ENST00000417137 C2orf83Q53S99 150 aa17.68■□□□□ 0.42
SMARCB1-205ENST00000417137 Q56UQ5 140 aa17.68■□□□□ 0.42
SMARCB1-205ENST00000417137 NRARPQ7Z6K4 114 aa17.68■□□□□ 0.42
SMARCB1-205ENST00000417137 UBAC2Q8NBM4 344 aa17.68■□□□□ 0.42
SMARCB1-205ENST00000417137 SLC24A4Q8NFF2 622 aa17.68■□□□□ 0.42
SMARCB1-205ENST00000417137 NOTCH3Q9UM47 2321 aa17.68■□□□□ 0.42
SMARCB1-205ENST00000417137 TGOLN2O43493 480 aa17.67■□□□□ 0.42
SMARCB1-205ENST00000417137 IFNA10P01566 189 aa17.67■□□□□ 0.42
SMARCB1-205ENST00000417137 IL5P05113 134 aa17.67■□□□□ 0.42
SMARCB1-205ENST00000417137 SEC22CQ9BRL7 303 aa17.67■□□□□ 0.42
SMARCB1-205ENST00000417137 GPN1Q9HCN4 374 aaPredicted RBP17.67■□□□□ 0.42
SMARCB1-205ENST00000417137 CMYA5Q8N3K9 4069 aa17.67■□□□□ 0.42
SMARCB1-205ENST00000417137 RPS10-NUDT3A0A1W2PQS6 291 aa17.66■□□□□ 0.42
SMARCB1-205ENST00000417137 OR2T8A6NH00 312 aa17.66■□□□□ 0.42
SMARCB1-205ENST00000417137 LY86O95711 162 aa17.66■□□□□ 0.42
SMARCB1-205ENST00000417137 NPY1RP25929 384 aa17.66■□□□□ 0.42
SMARCB1-205ENST00000417137 FCGR2BP31994 310 aaPredicted RBP17.66■□□□□ 0.42
SMARCB1-205ENST00000417137 NPBWR1P48145 328 aa17.66■□□□□ 0.42
SMARCB1-205ENST00000417137 EGFEM1PQ0D2K5 195 aa17.66■□□□□ 0.42
SMARCB1-205ENST00000417137 C12orf45Q8N5I9 185 aaPredicted RBP17.66■□□□□ 0.42
SMARCB1-205ENST00000417137 UXS1Q8NBZ7 420 aa17.66■□□□□ 0.42
SMARCB1-205ENST00000417137 RNASEH2CQ8TDP1 164 aaKnown RBP17.66■□□□□ 0.42
SMARCB1-205ENST00000417137 CIB3Q96Q77 187 aaPredicted RBP17.66■□□□□ 0.42
SMARCB1-205ENST00000417137 LGALS9O00182 355 aa17.65■□□□□ 0.42
SMARCB1-205ENST00000417137 OPRK1P41145 380 aa17.65■□□□□ 0.42
SMARCB1-205ENST00000417137 ZC4H2Q9NQZ6 224 aa17.65■□□□□ 0.42
SMARCB1-205ENST00000417137 ZNF320A2RRD8 509 aa17.64■□□□□ 0.41
SMARCB1-205ENST00000417137 INMT-MINDY4F8WBC2 141 aa17.64■□□□□ 0.41
SMARCB1-205ENST00000417137 NUPL2O15504 423 aaKnown RBP17.64■□□□□ 0.41
SMARCB1-205ENST00000417137 SYNGR2O43760 224 aa17.64■□□□□ 0.41
SMARCB1-205ENST00000417137 PRAF2O60831 178 aa17.64■□□□□ 0.41
SMARCB1-205ENST00000417137 RPP30P78346 268 aaKnown RBP17.64■□□□□ 0.41
SMARCB1-205ENST00000417137 IAH1Q2TAA2 248 aaPredicted RBP17.64■□□□□ 0.41
SMARCB1-205ENST00000417137 REC114Q7Z4M0 266 aa17.64■□□□□ 0.41
SMARCB1-205ENST00000417137 MPTX1A8MV57 137 aa17.63■□□□□ 0.41
SMARCB1-205ENST00000417137 GNG7O60262 68 aa17.63■□□□□ 0.41
SMARCB1-205ENST00000417137 SCGB2A1O75556 95 aa17.63■□□□□ 0.41
SMARCB1-205ENST00000417137 NKX2-1P43699 371 aaPredicted RBP17.63■□□□□ 0.41
SMARCB1-205ENST00000417137 ID3Q02535 119 aa17.63■□□□□ 0.41
SMARCB1-205ENST00000417137 ETFRF1Q6IPR1 90 aa17.63■□□□□ 0.41
SMARCB1-205ENST00000417137 MARVELD1Q9BSK0 173 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms