RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 MT-CO2P00403 227 aa11.15□□□□□ -0.62
DDX56-202ENST00000415758 APOHP02749 345 aaPredicted RBP11.15□□□□□ -0.62
DDX56-202ENST00000415758 EIF4EP06730 217 aaKnown RBP11.15□□□□□ -0.62
DDX56-202ENST00000415758 SDC2P34741 201 aa11.15□□□□□ -0.62
DDX56-202ENST00000415758 PVRIGQ6DKI7 326 aa11.15□□□□□ -0.62
DDX56-202ENST00000415758 Q6ZTC4 211 aa11.15□□□□□ -0.62
DDX56-202ENST00000415758 STHQ8IWL8 128 aa11.15□□□□□ -0.62
DDX56-202ENST00000415758 CMTM1Q8IZ96 169 aa11.15□□□□□ -0.62
DDX56-202ENST00000415758 MISP3Q96FF7 219 aa11.15□□□□□ -0.62
DDX56-202ENST00000415758 RNF126Q9BV68 326 aa11.15□□□□□ -0.62
DDX56-202ENST00000415758 DIABLOQ9NR28 239 aa11.15□□□□□ -0.62
DDX56-202ENST00000415758 FAM212BQ9NTI7 297 aaPredicted RBP11.15□□□□□ -0.62
DDX56-202ENST00000415758 SSR3Q9UNL2 185 aa11.15□□□□□ -0.62
DDX56-202ENST00000415758 GNG7O60262 68 aa11.14□□□□□ -0.63
DDX56-202ENST00000415758 FCER2P06734 321 aa11.14□□□□□ -0.63
DDX56-202ENST00000415758 SPP1P10451 314 aa11.14□□□□□ -0.63
DDX56-202ENST00000415758 MORN3Q6PF18 240 aaPredicted RBP11.14□□□□□ -0.63
DDX56-202ENST00000415758 TRPT1Q86TN4 253 aaKnown RBP11.14□□□□□ -0.63
DDX56-202ENST00000415758 FAM24BQ8N5W8 94 aa11.14□□□□□ -0.63
DDX56-202ENST00000415758 TSPAN14Q8NG11 270 aa11.14□□□□□ -0.63
DDX56-202ENST00000415758 ZNF2Q9BSG1 426 aaPredicted RBP11.14□□□□□ -0.63
DDX56-202ENST00000415758 EHFQ9NZC4 300 aa11.14□□□□□ -0.63
DDX56-202ENST00000415758 X6R8D5 127 aa11.14□□□□□ -0.63
DDX56-202ENST00000415758 ELOA3CA0A087WX78 387 aaPredicted RBP11.13□□□□□ -0.63
DDX56-202ENST00000415758 RFX2P48378 723 aa11.13□□□□□ -0.63
DDX56-202ENST00000415758 GABARAPL2P60520 117 aa11.13□□□□□ -0.63
DDX56-202ENST00000415758 PRCDQ00LT1 54 aa11.13□□□□□ -0.63
DDX56-202ENST00000415758 CNBD2Q96M20 576 aa11.13□□□□□ -0.63
DDX56-202ENST00000415758 ZFAND3Q9H8U3 227 aa11.13□□□□□ -0.63
DDX56-202ENST00000415758 ANAPC10Q9UM13 185 aa11.13□□□□□ -0.63
DDX56-202ENST00000415758 GPR31O00270 319 aa11.12□□□□□ -0.63
DDX56-202ENST00000415758 RTL8CO15255 209 aa11.12□□□□□ -0.63
DDX56-202ENST00000415758 TMEM127O75204 238 aa11.12□□□□□ -0.63
DDX56-202ENST00000415758 IGHV3-48P01763 117 aa11.12□□□□□ -0.63
DDX56-202ENST00000415758 CLEC2LP0C7M8 214 aa11.12□□□□□ -0.63
DDX56-202ENST00000415758 NPBWR1P48145 328 aa11.12□□□□□ -0.63
DDX56-202ENST00000415758 HSPA13P48723 471 aa11.12□□□□□ -0.63
DDX56-202ENST00000415758 IDNKQ5T6J7 187 aa11.12□□□□□ -0.63
DDX56-202ENST00000415758 ZNF600Q6ZNG1 722 aa11.12□□□□□ -0.63
DDX56-202ENST00000415758 SPARTQ8N0X7 666 aa11.12□□□□□ -0.63
DDX56-202ENST00000415758 CENPSQ8N2Z9 138 aa11.12□□□□□ -0.63
DDX56-202ENST00000415758 POM121L12Q8N7R1 296 aa11.12□□□□□ -0.63
DDX56-202ENST00000415758 CSNK1G2-AS1Q8NCQ2 148 aa11.12□□□□□ -0.63
DDX56-202ENST00000415758 GRAMD2BQ96HH9 432 aa11.12□□□□□ -0.63
DDX56-202ENST00000415758 SEC22AQ96IW7 307 aa11.12□□□□□ -0.63
DDX56-202ENST00000415758 TMEM231Q9H6L2 316 aa11.12□□□□□ -0.63
DDX56-202ENST00000415758 PUS1Q9Y606 427 aaKnown RBP eCLIP11.12□□□□□ -0.63
DDX56-202ENST00000415758 MEIS3P1A6NDR6 274 aa11.11□□□□□ -0.63
DDX56-202ENST00000415758 PRSS29PA6NIE9 313 aa11.11□□□□□ -0.63
DDX56-202ENST00000415758 K7EQG2 157 aa11.11□□□□□ -0.63
DDX56-202ENST00000415758 AMBPP02760 352 aa11.11□□□□□ -0.63
DDX56-202ENST00000415758 P0DMU3 169 aa11.11□□□□□ -0.63
DDX56-202ENST00000415758 FAM231AP0DMU4 169 aa11.11□□□□□ -0.63
DDX56-202ENST00000415758 FAM231CP0DMU5 169 aa11.11□□□□□ -0.63
DDX56-202ENST00000415758 NAT1P18440 290 aa11.11□□□□□ -0.63
DDX56-202ENST00000415758 PSMB9P28065 219 aa11.11□□□□□ -0.63
DDX56-202ENST00000415758 HSPE1P61604 102 aaKnown RBP11.11□□□□□ -0.63
DDX56-202ENST00000415758 RPL11P62913 178 aaKnown RBP11.11□□□□□ -0.63
DDX56-202ENST00000415758 MXD1Q05195 221 aa11.11□□□□□ -0.63
DDX56-202ENST00000415758 OR4A16Q8NH70 328 aa11.11□□□□□ -0.63
DDX56-202ENST00000415758 FCGR1BQ92637 280 aa11.11□□□□□ -0.63
DDX56-202ENST00000415758 PINX1Q96BK5 328 aaKnown RBP11.11□□□□□ -0.63
DDX56-202ENST00000415758 IFT46Q9NQC8 304 aa11.11□□□□□ -0.63
DDX56-202ENST00000415758 PKD1P98161 4303 aa11.1□□□□□ -0.63
DDX56-202ENST00000415758 IGHV3-66A0A0C4DH42 116 aa11.1□□□□□ -0.63
DDX56-202ENST00000415758 A0A1W2PS18 150 aa11.1□□□□□ -0.63
DDX56-202ENST00000415758 TMEM50AO95807 157 aa11.1□□□□□ -0.63
DDX56-202ENST00000415758 C4BPBP20851 252 aa11.1□□□□□ -0.63
DDX56-202ENST00000415758 NPPCP23582 126 aa11.1□□□□□ -0.63
DDX56-202ENST00000415758 TAS2R46P59540 309 aa11.1□□□□□ -0.63
DDX56-202ENST00000415758 ERHP84090 104 aaKnown RBP11.1□□□□□ -0.63
DDX56-202ENST00000415758 OR6F1Q8NGZ6 308 aa11.1□□□□□ -0.63
DDX56-202ENST00000415758 VCX3BQ9H321 246 aa11.1□□□□□ -0.63
DDX56-202ENST00000415758 RABAC1Q9UI14 185 aa11.1□□□□□ -0.63
DDX56-202ENST00000415758 ABCA13Q86UQ4 5058 aa11.1□□□□□ -0.63
DDX56-202ENST00000415758 DNAH11Q96DT5 4516 aa11.09□□□□□ -0.63
DDX56-202ENST00000415758 DEFB131BA0A096LNP1 70 aa11.09□□□□□ -0.63
DDX56-202ENST00000415758 A0A1B0GU03 582 aa11.09□□□□□ -0.63
DDX56-202ENST00000415758 ANKRD65E5RJM6 399 aa11.09□□□□□ -0.63
DDX56-202ENST00000415758 INS-IGF2F8WCM5 200 aa11.09□□□□□ -0.63
DDX56-202ENST00000415758 IGKV1-39P01597 117 aa11.09□□□□□ -0.63
DDX56-202ENST00000415758 PMP2P02689 132 aa11.09□□□□□ -0.63
DDX56-202ENST00000415758 IGKV1D-39P04432 117 aa11.09□□□□□ -0.63
DDX56-202ENST00000415758 C12orf74Q32Q52 190 aa11.09□□□□□ -0.63
DDX56-202ENST00000415758 LGALS9BQ3B8N2 356 aa11.09□□□□□ -0.63
DDX56-202ENST00000415758 LPCAT3Q6P1A2 487 aa11.09□□□□□ -0.63
DDX56-202ENST00000415758 H2BFWTQ7Z2G1 175 aa11.09□□□□□ -0.63
DDX56-202ENST00000415758 OR5H2Q8NGV7 314 aa11.09□□□□□ -0.63
DDX56-202ENST00000415758 FXYD6Q9H0Q3 95 aa11.09□□□□□ -0.63
DDX56-202ENST00000415758 RNF167Q9H6Y7 350 aa11.09□□□□□ -0.63
DDX56-202ENST00000415758 TBC1D24Q9ULP9 559 aa11.09□□□□□ -0.63
DDX56-202ENST00000415758 CRYBB3P26998 211 aa11.08□□□□□ -0.64
DDX56-202ENST00000415758 IZUMO2Q6UXV1 221 aa11.08□□□□□ -0.64
DDX56-202ENST00000415758 LYSMD2Q8IV50 215 aa11.08□□□□□ -0.64
DDX56-202ENST00000415758 DCANP1Q8TF63 244 aa11.08□□□□□ -0.64
DDX56-202ENST00000415758 S100A16Q96FQ6 103 aaKnown RBP11.08□□□□□ -0.64
DDX56-202ENST00000415758 NDUFAF3Q9BU61 184 aa11.08□□□□□ -0.64
DDX56-202ENST00000415758 CELA1Q9UNI1 258 aa11.08□□□□□ -0.64
DDX56-202ENST00000415758 DYNC1H1Q14204 4646 aaKnown RBP11.08□□□□□ -0.64
DDX56-202ENST00000415758 KNCNA6PVL3 124 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms