RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 GPR6P46095 362 aaPredicted RBP9.42□□□□□ -0.9
RFFL-205ENST00000415395 ZNF134P52741 427 aa9.42□□□□□ -0.9
RFFL-205ENST00000415395 YPEL3P61236 119 aaPredicted RBP9.42□□□□□ -0.9
RFFL-205ENST00000415395 RPL15P61313 204 aaKnown RBP9.42□□□□□ -0.9
RFFL-205ENST00000415395 CT45A1Q5HYN5 189 aa9.42□□□□□ -0.9
RFFL-205ENST00000415395 ZNF664Q8N3J9 261 aa9.42□□□□□ -0.9
RFFL-205ENST00000415395 LINC00311Q8N616 119 aa9.42□□□□□ -0.9
RFFL-205ENST00000415395 OR4S2Q8NH73 311 aa9.42□□□□□ -0.9
RFFL-205ENST00000415395 CT45A3Q8NHU0 189 aa9.42□□□□□ -0.9
RFFL-205ENST00000415395 ZNF596Q8TC21 504 aa9.42□□□□□ -0.9
RFFL-205ENST00000415395 ADTRPQ96IZ2 230 aa9.42□□□□□ -0.9
RFFL-205ENST00000415395 S1PR3Q99500 378 aa9.42□□□□□ -0.9
RFFL-205ENST00000415395 PATZ1Q9HBE1 687 aaKnown RBP9.42□□□□□ -0.9
RFFL-205ENST00000415395 USF3Q68DE3 2245 aa9.42□□□□□ -0.9
RFFL-205ENST00000415395 LINC00473A8K010 186 aa9.41□□□□□ -0.9
RFFL-205ENST00000415395 FCGR3BO75015 233 aa9.41□□□□□ -0.9
RFFL-205ENST00000415395 LY6HO94772 140 aa9.41□□□□□ -0.9
RFFL-205ENST00000415395 SCGB1D1O95968 90 aa9.41□□□□□ -0.9
RFFL-205ENST00000415395 CCL3L1P16619 93 aa9.41□□□□□ -0.9
RFFL-205ENST00000415395 ATP5IP56385 69 aaPredicted RBP9.41□□□□□ -0.9
RFFL-205ENST00000415395 BRWD1-AS2P59051 145 aa9.41□□□□□ -0.9
RFFL-205ENST00000415395 TPPP2P59282 170 aa9.41□□□□□ -0.9
RFFL-205ENST00000415395 UBE2G2P60604 165 aa9.41□□□□□ -0.9
RFFL-205ENST00000415395 RANP62826 216 aaKnown RBP9.41□□□□□ -0.9
RFFL-205ENST00000415395 SRSF1Q07955 248 aaKnown RBP eCLIP9.41□□□□□ -0.9
RFFL-205ENST00000415395 FAM71F2Q6NXP2 309 aa9.41□□□□□ -0.9
RFFL-205ENST00000415395 SGMS2Q8NHU3 365 aa9.41□□□□□ -0.9
RFFL-205ENST00000415395 C9JCJ5 164 aa9.4□□□□□ -0.9
RFFL-205ENST00000415395 M0QZK8 103 aa9.4□□□□□ -0.9
RFFL-205ENST00000415395 M0R1X1 148 aa9.4□□□□□ -0.9
RFFL-205ENST00000415395 MMP23AO75900 390 aa9.4□□□□□ -0.9
RFFL-205ENST00000415395 OR9G9P0C7N8 305 aa9.4□□□□□ -0.9
RFFL-205ENST00000415395 ARL14EPLP0DKL9 152 aa9.4□□□□□ -0.9
RFFL-205ENST00000415395 COX6B1P14854 86 aa9.4□□□□□ -0.9
RFFL-205ENST00000415395 ATP5G3P48201 142 aa9.4□□□□□ -0.9
RFFL-205ENST00000415395 RTL8BQ17RB0 113 aa9.4□□□□□ -0.9
RFFL-205ENST00000415395 TREML4Q6UXN2 200 aa9.4□□□□□ -0.9
RFFL-205ENST00000415395 LY6G5BQ8NDX9 201 aa9.4□□□□□ -0.9
RFFL-205ENST00000415395 CMTM2Q8TAZ6 248 aa9.4□□□□□ -0.9
RFFL-205ENST00000415395 TNFRSF14Q92956 283 aa9.4□□□□□ -0.9
RFFL-205ENST00000415395 MS4A10Q96PG2 267 aa9.4□□□□□ -0.9
RFFL-205ENST00000415395 CCL19Q99731 98 aa9.4□□□□□ -0.9
RFFL-205ENST00000415395 GGTLC1Q9BX51 225 aa9.4□□□□□ -0.9
RFFL-205ENST00000415395 IL36BQ9NZH7 164 aa9.4□□□□□ -0.9
RFFL-205ENST00000415395 SAA2-SAA4A0A096LPE2 208 aa9.39□□□□□ -0.91
RFFL-205ENST00000415395 PROP1O75360 226 aa9.39□□□□□ -0.91
RFFL-205ENST00000415395 SAA2P0DJI9 122 aaPredicted RBP9.39□□□□□ -0.91
RFFL-205ENST00000415395 IGHV1-8P0DP01 117 aa9.39□□□□□ -0.91
RFFL-205ENST00000415395 NPPCP23582 126 aa9.39□□□□□ -0.91
RFFL-205ENST00000415395 VDAC2P45880 294 aaPredicted RBP9.39□□□□□ -0.91
RFFL-205ENST00000415395 THBS3P49746 956 aa9.39□□□□□ -0.91
RFFL-205ENST00000415395 ERVFC1-1P60608 527 aa9.39□□□□□ -0.91
RFFL-205ENST00000415395 ZNF90Q03938 601 aa9.39□□□□□ -0.91
RFFL-205ENST00000415395 CLEC12BQ2HXU8 276 aa9.39□□□□□ -0.91
RFFL-205ENST00000415395 SPINK9Q5DT21 86 aa9.39□□□□□ -0.91
RFFL-205ENST00000415395 C1orf194Q5T5A4 169 aa9.39□□□□□ -0.91
RFFL-205ENST00000415395 TEPPQ6URK8 271 aa9.39□□□□□ -0.91
RFFL-205ENST00000415395 C11orf52Q96A22 123 aa9.39□□□□□ -0.91
RFFL-205ENST00000415395 TMEM167BQ9NRX6 74 aa9.39□□□□□ -0.91
RFFL-205ENST00000415395 NAGKQ9UJ70 344 aa9.39□□□□□ -0.91
RFFL-205ENST00000415395 PPIAL4CA0A0B4J2A2 164 aa9.39□□□□□ -0.91
RFFL-205ENST00000415395 M0R143 59 aa9.39□□□□□ -0.91
RFFL-205ENST00000415395 MT-ND6P03923 174 aa9.39□□□□□ -0.91
RFFL-205ENST00000415395 LIPFP07098 398 aa9.39□□□□□ -0.91
RFFL-205ENST00000415395 PPIAL4GP0DN37 164 aa9.39□□□□□ -0.91
RFFL-205ENST00000415395 AREGP15514 252 aa9.39□□□□□ -0.91
RFFL-205ENST00000415395 GCHFRP30047 84 aa9.39□□□□□ -0.91
RFFL-205ENST00000415395 RPL29P47914 159 aaKnown RBP9.39□□□□□ -0.91
RFFL-205ENST00000415395 SELENOTP62341 195 aa9.39□□□□□ -0.91
RFFL-205ENST00000415395 WDR73Q6P4I2 378 aa9.39□□□□□ -0.91
RFFL-205ENST00000415395 LYG1Q8N1E2 194 aa9.39□□□□□ -0.91
RFFL-205ENST00000415395 Q8N7P7 452 aa9.39□□□□□ -0.91
RFFL-205ENST00000415395 OR9G1Q8NH87 305 aa9.39□□□□□ -0.91
RFFL-205ENST00000415395 LEAP2Q969E1 77 aa9.39□□□□□ -0.91
RFFL-205ENST00000415395 MGST2Q99735 147 aa9.39□□□□□ -0.91
RFFL-205ENST00000415395 C19orf24Q9BVV8 132 aa9.39□□□□□ -0.91
RFFL-205ENST00000415395 SSBP3Q9BWW4 388 aaPredicted RBP9.39□□□□□ -0.91
RFFL-205ENST00000415395 SLC45A2Q9UMX9 530 aa9.39□□□□□ -0.91
RFFL-205ENST00000415395 MALRD1Q5VYJ5 2156 aa9.38□□□□□ -0.91
RFFL-205ENST00000415395 NPY1RP25929 384 aa9.38□□□□□ -0.91
RFFL-205ENST00000415395 GNG10P50151 68 aa9.38□□□□□ -0.91
RFFL-205ENST00000415395 ZNF137PP52743 207 aa9.38□□□□□ -0.91
RFFL-205ENST00000415395 RPS16P62249 146 aaKnown RBP9.38□□□□□ -0.91
RFFL-205ENST00000415395 RELBQ01201 579 aa9.38□□□□□ -0.91
RFFL-205ENST00000415395 RPEL1Q2QD12 228 aa9.38□□□□□ -0.91
RFFL-205ENST00000415395 RPL39P5Q59GN2 51 aa9.38□□□□□ -0.91
RFFL-205ENST00000415395 TEX38Q6PEX7 206 aa9.38□□□□□ -0.91
RFFL-205ENST00000415395 ZNF833PQ6ZTB9 187 aa9.38□□□□□ -0.91
RFFL-205ENST00000415395 C11orf42Q8N5U0 333 aa9.38□□□□□ -0.91
RFFL-205ENST00000415395 DDB2Q92466 427 aa9.38□□□□□ -0.91
RFFL-205ENST00000415395 TMEM186Q96B77 213 aa9.38□□□□□ -0.91
RFFL-205ENST00000415395 TMEM133Q9H2Q1 129 aa9.38□□□□□ -0.91
RFFL-205ENST00000415395 TMEM140Q9NV12 185 aa9.38□□□□□ -0.91
RFFL-205ENST00000415395 TCF19Q9Y242 345 aa9.38□□□□□ -0.91
RFFL-205ENST00000415395 FOXA2Q9Y261 457 aaPredicted RBP9.38□□□□□ -0.91
RFFL-205ENST00000415395 KIR2DL5BA0A0G2JN68 375 aa9.37□□□□□ -0.91
RFFL-205ENST00000415395 KIR2DL5BA0A0G2JPC4 375 aa9.37□□□□□ -0.91
RFFL-205ENST00000415395 C15orf61A6NNL5 157 aa9.37□□□□□ -0.91
RFFL-205ENST00000415395 ZNF705FA8MVS1 300 aaPredicted RBP9.37□□□□□ -0.91
RFFL-205ENST00000415395 PRSS46E5RG02 174 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms