RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 PALMDQ9NP74 551 aa9.31□□□□□ -0.92
NCKIPSD-203ENST00000415281 NDUFA4L2Q9NRX3 87 aa9.31□□□□□ -0.92
NCKIPSD-203ENST00000415281 PEMTQ9UBM1 199 aa9.31□□□□□ -0.92
NCKIPSD-203ENST00000415281 MLXQ9UH92 298 aa9.31□□□□□ -0.92
NCKIPSD-203ENST00000415281 KMT2AQ03164 3969 aa9.31□□□□□ -0.92
NCKIPSD-203ENST00000415281 A0A0B4J293 547 aa9.3□□□□□ -0.92
NCKIPSD-203ENST00000415281 A0A0G2JRQ6 117 aa9.3□□□□□ -0.92
NCKIPSD-203ENST00000415281 IGLC7A0M8Q6 106 aa9.3□□□□□ -0.92
NCKIPSD-203ENST00000415281 NAP1L6A6NFF2 107 aa9.3□□□□□ -0.92
NCKIPSD-203ENST00000415281 MFSD2BA6NFX1 497 aa9.3□□□□□ -0.92
NCKIPSD-203ENST00000415281 C15orf61A6NNL5 157 aa9.3□□□□□ -0.92
NCKIPSD-203ENST00000415281 GGCTO75223 188 aaKnown RBP9.3□□□□□ -0.92
NCKIPSD-203ENST00000415281 SUPT4H1P63272 117 aaKnown RBP9.3□□□□□ -0.92
NCKIPSD-203ENST00000415281 TMEM268Q5VZI3 342 aa9.3□□□□□ -0.92
NCKIPSD-203ENST00000415281 CLEC19AQ6UXS0 136 aa9.3□□□□□ -0.92
NCKIPSD-203ENST00000415281 UNQ9165/PRO28630Q6UXU0 137 aa9.3□□□□□ -0.92
NCKIPSD-203ENST00000415281 LINC00299Q6ZSB3 139 aa9.3□□□□□ -0.92
NCKIPSD-203ENST00000415281 GTSCR1Q86UQ5 136 aa9.3□□□□□ -0.92
NCKIPSD-203ENST00000415281 RBPMSQ93062 196 aaKnown RBP9.3□□□□□ -0.92
NCKIPSD-203ENST00000415281 TUBA4BQ9H853 241 aa9.3□□□□□ -0.92
NCKIPSD-203ENST00000415281 TMEM14BQ9NUH8 114 aa9.3□□□□□ -0.92
NCKIPSD-203ENST00000415281 DNAH10Q8IVF4 4471 aa9.29□□□□□ -0.92
NCKIPSD-203ENST00000415281 OR11H12B2RN74 326 aa9.29□□□□□ -0.92
NCKIPSD-203ENST00000415281 PLA2G10O15496 165 aa9.29□□□□□ -0.92
NCKIPSD-203ENST00000415281 DHFRP00374 187 aa9.29□□□□□ -0.92
NCKIPSD-203ENST00000415281 FGF2P09038 288 aa9.29□□□□□ -0.92
NCKIPSD-203ENST00000415281 C8orf88P0DMB2 117 aa9.29□□□□□ -0.92
NCKIPSD-203ENST00000415281 VAMP1P23763 118 aa9.29□□□□□ -0.92
NCKIPSD-203ENST00000415281 HSPE1P61604 102 aaKnown RBP9.29□□□□□ -0.92
NCKIPSD-203ENST00000415281 WT1-ASQ06250 92 aa9.29□□□□□ -0.92
NCKIPSD-203ENST00000415281 TMEM187Q14656 261 aa9.29□□□□□ -0.92
NCKIPSD-203ENST00000415281 RBMS2Q15434 407 aaKnown RBP9.29□□□□□ -0.92
NCKIPSD-203ENST00000415281 TMEM128Q5BJH2 165 aa9.29□□□□□ -0.92
NCKIPSD-203ENST00000415281 SPINK9Q5DT21 86 aa9.29□□□□□ -0.92
NCKIPSD-203ENST00000415281 TMEM61Q8N0U2 210 aa9.29□□□□□ -0.92
NCKIPSD-203ENST00000415281 GALNT14Q96FL9 552 aa9.29□□□□□ -0.92
NCKIPSD-203ENST00000415281 TMEM56Q96MV1 263 aa9.29□□□□□ -0.92
NCKIPSD-203ENST00000415281 FLVCR2Q9UPI3 526 aa9.29□□□□□ -0.92
NCKIPSD-203ENST00000415281 A8MWP6 167 aa9.28□□□□□ -0.92
NCKIPSD-203ENST00000415281 ST8SIA3O43173 380 aa9.28□□□□□ -0.92
NCKIPSD-203ENST00000415281 IFNA17P01571 189 aa9.28□□□□□ -0.92
NCKIPSD-203ENST00000415281 P0C879 139 aa9.28□□□□□ -0.92
NCKIPSD-203ENST00000415281 MFAP2P55001 183 aa9.28□□□□□ -0.92
NCKIPSD-203ENST00000415281 EWSR1Q01844 656 aaKnown RBP eCLIP9.28□□□□□ -0.92
NCKIPSD-203ENST00000415281 TM4SF20Q53R12 229 aa9.28□□□□□ -0.92
NCKIPSD-203ENST00000415281 SLC25A24Q6NUK1 477 aa9.28□□□□□ -0.92
NCKIPSD-203ENST00000415281 Q6ZRM9 215 aa9.28□□□□□ -0.92
NCKIPSD-203ENST00000415281 CENPSQ8N2Z9 138 aa9.28□□□□□ -0.92
NCKIPSD-203ENST00000415281 SLC35G3Q8N808 338 aa9.28□□□□□ -0.92
NCKIPSD-203ENST00000415281 OR5B3Q8NH48 314 aa9.28□□□□□ -0.92
NCKIPSD-203ENST00000415281 LSM10Q969L4 123 aaKnown RBP9.28□□□□□ -0.92
NCKIPSD-203ENST00000415281 GPR146Q96CH1 333 aa9.28□□□□□ -0.92
NCKIPSD-203ENST00000415281 C7orf50Q9BRJ6 194 aaKnown RBP9.28□□□□□ -0.92
NCKIPSD-203ENST00000415281 SRSF8Q9BRL6 282 aaKnown RBP9.28□□□□□ -0.92
NCKIPSD-203ENST00000415281 CCDC32Q9BV29 185 aa9.28□□□□□ -0.92
NCKIPSD-203ENST00000415281 SRD5A3Q9H8P0 318 aa9.28□□□□□ -0.92
NCKIPSD-203ENST00000415281 TECRQ9NZ01 308 aaKnown RBP9.28□□□□□ -0.92
NCKIPSD-203ENST00000415281 TMEM56-RWDD3S4R434 201 aa9.28□□□□□ -0.92
NCKIPSD-203ENST00000415281 VPS13DQ5THJ4 4388 aa9.27□□□□□ -0.93
NCKIPSD-203ENST00000415281 F8W735 103 aaPredicted RBP9.27□□□□□ -0.93
NCKIPSD-203ENST00000415281 LYRM1O43325 122 aa9.27□□□□□ -0.93
NCKIPSD-203ENST00000415281 NDUFB6O95139 128 aa9.27□□□□□ -0.93
NCKIPSD-203ENST00000415281 CLEC3BP05452 202 aa9.27□□□□□ -0.93
NCKIPSD-203ENST00000415281 ANXA3P12429 323 aa9.27□□□□□ -0.93
NCKIPSD-203ENST00000415281 HIST1H1BP16401 226 aaKnown RBP9.27□□□□□ -0.93
NCKIPSD-203ENST00000415281 BTCP35070 178 aa9.27□□□□□ -0.93
NCKIPSD-203ENST00000415281 ARL3P36405 182 aa9.27□□□□□ -0.93
NCKIPSD-203ENST00000415281 PPP1R1AQ13522 171 aa9.27□□□□□ -0.93
NCKIPSD-203ENST00000415281 ZNF846Q147U1 533 aa9.27□□□□□ -0.93
NCKIPSD-203ENST00000415281 LYZL2Q7Z4W2 148 aa9.27□□□□□ -0.93
NCKIPSD-203ENST00000415281 HSD17B13Q7Z5P4 300 aaPredicted RBP9.27□□□□□ -0.93
NCKIPSD-203ENST00000415281 UXS1Q8NBZ7 420 aa9.27□□□□□ -0.93
NCKIPSD-203ENST00000415281 ZNF502Q8TBZ5 544 aa9.27□□□□□ -0.93
NCKIPSD-203ENST00000415281 OVOL2Q9BRP0 275 aa9.27□□□□□ -0.93
NCKIPSD-203ENST00000415281 PDCD10Q9BUL8 212 aa9.27□□□□□ -0.93
NCKIPSD-203ENST00000415281 NXPH3O95157 252 aa9.26□□□□□ -0.93
NCKIPSD-203ENST00000415281 ANXA7P20073 488 aaKnown RBP9.26□□□□□ -0.93
NCKIPSD-203ENST00000415281 PRCDQ00LT1 54 aa9.26□□□□□ -0.93
NCKIPSD-203ENST00000415281 GUCA2BQ16661 112 aa9.26□□□□□ -0.93
NCKIPSD-203ENST00000415281 FAM209BQ5JX69 171 aa9.26□□□□□ -0.93
NCKIPSD-203ENST00000415281 THOC7Q6I9Y2 204 aaKnown RBP9.26□□□□□ -0.93
NCKIPSD-203ENST00000415281 FAM219AQ8IW50 185 aa9.26□□□□□ -0.93
NCKIPSD-203ENST00000415281 LGI3Q8N145 548 aa9.26□□□□□ -0.93
NCKIPSD-203ENST00000415281 IL22RA2Q969J5 263 aa9.26□□□□□ -0.93
NCKIPSD-203ENST00000415281 WDR12Q9GZL7 423 aaKnown RBP9.26□□□□□ -0.93
NCKIPSD-203ENST00000415281 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.26□□□□□ -0.93
NCKIPSD-203ENST00000415281 CACNG5Q9UF02 275 aa9.26□□□□□ -0.93
NCKIPSD-203ENST00000415281 IGHV3-21A0A0B4J1V1 117 aa9.25□□□□□ -0.93
NCKIPSD-203ENST00000415281 SFT2D2O95562 160 aa9.25□□□□□ -0.93
NCKIPSD-203ENST00000415281 SRPXP78539 464 aa9.25□□□□□ -0.93
NCKIPSD-203ENST00000415281 ERHP84090 104 aaKnown RBP9.25□□□□□ -0.93
NCKIPSD-203ENST00000415281 ANKRD55Q3KP44 614 aa9.25□□□□□ -0.93
NCKIPSD-203ENST00000415281 DYNLRB2Q8TF09 96 aa9.25□□□□□ -0.93
NCKIPSD-203ENST00000415281 ZNF436Q9C0F3 470 aaPredicted RBP9.25□□□□□ -0.93
NCKIPSD-203ENST00000415281 THYN1Q9P016 225 aa9.25□□□□□ -0.93
NCKIPSD-203ENST00000415281 F11RQ9Y624 299 aaKnown RBP9.25□□□□□ -0.93
NCKIPSD-203ENST00000415281 A0A0B4J2A0 478 aa9.24□□□□□ -0.93
NCKIPSD-203ENST00000415281 IGHV3-35A0A0C4DH35 117 aa9.24□□□□□ -0.93
NCKIPSD-203ENST00000415281 ZNF320A2RRD8 509 aa9.24□□□□□ -0.93
NCKIPSD-203ENST00000415281 C9orf170A2RU37 121 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms