RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 CCL24O00175 119 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 PGLYRP1O75594 196 aaPredicted RBP3.75□□□□□ -1.81
VPS41-205ENST00000414632 KBTBD11O94819 623 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 HPRT1P00492 218 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 HRASP01112 189 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 KRASP01116 189 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 ZNF735P0CB33 412 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 G6PCP35575 357 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 MYCNOSP40205 109 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 KIR2DS2P43631 304 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 RPL27AP46776 148 aaKnown RBP3.75□□□□□ -1.81
VPS41-205ENST00000414632 CDX1P47902 265 aaPredicted RBP3.75□□□□□ -1.81
VPS41-205ENST00000414632 CRIP2P52943 208 aaPredicted RBP3.75□□□□□ -1.81
VPS41-205ENST00000414632 TAS2R19P59542 299 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 OR2B8PP59922 312 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 KLF9Q13886 244 aaPredicted RBP3.75□□□□□ -1.81
VPS41-205ENST00000414632 ZNF585BQ52M93 769 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 AKIRIN2Q53H80 203 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 PYDC2Q56P42 97 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 VAX1Q5SQQ9 334 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 PYHIN1Q6K0P9 492 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 STEAP1BQ6NZ63 245 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 MMD2Q8IY49 270 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 CMTM1Q8IZ96 169 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 PUSL1Q8N0Z8 303 aaKnown RBP3.75□□□□□ -1.81
VPS41-205ENST00000414632 THAP8Q8NA92 274 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 TMEM229BQ8NBD8 167 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 OR4C16Q8NGL9 310 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 OR1N2Q8NGR9 330 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 TMEM167AQ8TBQ9 72 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 MARCH1Q8TCQ1 289 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 MYOZ3Q8TDC0 251 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 SMIM4Q8WVI0 70 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 C4orf3Q8WVX3 66 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 MRGPRFQ96AM1 343 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 DGCR14Q96DF8 476 aaKnown RBP3.75□□□□□ -1.81
VPS41-205ENST00000414632 P2RX4Q99571 388 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 HINT2Q9BX68 163 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 SLC2A9Q9NRM0 540 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 ZNF580Q9UK33 172 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 VSIG4Q9Y279 399 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 NSG2Q9Y328 171 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 S4R3C0 116 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 V9GYH0 126 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 COL7A1Q02388 2944 aa3.75□□□□□ -1.81
VPS41-205ENST00000414632 C13orf42A0A1B0GVH6 325 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 LINC00854A0A1B0GVQ3 168 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 DISC1C4P0D8 188 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 I3L521 148 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 UPK2O00526 184 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 CREBL2O60519 120 aaPredicted RBP3.74□□□□□ -1.81
VPS41-205ENST00000414632 PRAF2O60831 178 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 OR2J3O76001 311 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 IGKV1-39P01597 117 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 TRBV12-3P01733 135 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 IGHV3-23P01764 117 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 CD74P04233 296 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 IGKV1D-39P04432 117 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 LGALS1P09382 135 aaKnown RBP3.74□□□□□ -1.81
VPS41-205ENST00000414632 OR9G9P0C7N8 305 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 AKAIN1P0CW23 69 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 AREGP15514 252 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 NQO2P16083 231 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 HLA-GP17693 338 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 F2RP25116 425 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 CD40LGP29965 261 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 S100A5P33763 92 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 PIGPP57054 158 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 TAS2R31P59538 309 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 KRTAP10-11P60412 298 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 ERVK-16P61578 105 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 RPL8P62917 257 aaKnown RBP3.74□□□□□ -1.81
VPS41-205ENST00000414632 ZNF45Q02386 682 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 ZNF616Q08AN1 781 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 MSMO1Q15800 293 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 ZNF79Q15937 498 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 IZUMO4Q1ZYL8 232 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 SP6Q3SY56 376 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 SPINK9Q5DT21 86 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 LHFPL1Q86WI0 220 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 SLC38A6Q8IZM9 456 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 ARRDC1Q8N5I2 433 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 TCTEX1D1Q8N7M0 179 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 ADAD2Q8NCV1 583 aaKnown RBP3.74□□□□□ -1.81
VPS41-205ENST00000414632 OR10W1Q8NGF6 305 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 OR51S1Q8NGJ8 323 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 OR13C8Q8NGS7 320 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 C15orf40Q8WUR7 153 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 BORCS5Q969J3 196 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 RPL36ALQ969Q0 106 aaKnown RBP3.74□□□□□ -1.81
VPS41-205ENST00000414632 UBE2E2Q96LR5 201 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 SRD5A3Q9H8P0 318 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 MCUBQ9NWR8 336 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 BET1LQ9NYM9 111 aa3.74□□□□□ -1.81
VPS41-205ENST00000414632 DNAH9Q9NYC9 4486 aa3.73□□□□□ -1.81
VPS41-205ENST00000414632 IGHV3-21A0A0B4J1V1 117 aa3.73□□□□□ -1.81
VPS41-205ENST00000414632 TEX50A0A1B0GTY4 177 aa3.73□□□□□ -1.81
VPS41-205ENST00000414632 ANKRD20A5PA0PJZ0 165 aa3.73□□□□□ -1.81
VPS41-205ENST00000414632 SEC14L6B5MCN3 397 aa3.73□□□□□ -1.81
VPS41-205ENST00000414632 PPP5D1E7EU14 171 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms