RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 FAM231BA6NCW3 169 aa7.73□□□□□ -1.17
SNHG3-201ENST00000413987 CST7O76096 145 aa7.73□□□□□ -1.17
SNHG3-201ENST00000413987 PAFAH1B2P68402 229 aa7.73□□□□□ -1.17
SNHG3-201ENST00000413987 ZNF92Q03936 586 aa7.73□□□□□ -1.17
SNHG3-201ENST00000413987 OR8B8Q15620 311 aa7.73□□□□□ -1.17
SNHG3-201ENST00000413987 PRR26Q8N8Z3 221 aa7.73□□□□□ -1.17
SNHG3-201ENST00000413987 MSL2Q9HCI7 577 aa7.73□□□□□ -1.17
SNHG3-201ENST00000413987 SS18L2Q9UHA2 77 aa7.73□□□□□ -1.17
SNHG3-201ENST00000413987 EPG5Q9HCE0 2579 aa7.73□□□□□ -1.17
SNHG3-201ENST00000413987 RPL23P62829 140 aaKnown RBP7.72□□□□□ -1.17
SNHG3-201ENST00000413987 OR5I1Q13606 314 aa7.72□□□□□ -1.17
SNHG3-201ENST00000413987 TCTEX1D4Q5JR98 221 aa7.72□□□□□ -1.17
SNHG3-201ENST00000413987 FAM78BQ5VT40 261 aa7.72□□□□□ -1.17
SNHG3-201ENST00000413987 TEX43Q6ZNM6 134 aa7.72□□□□□ -1.17
SNHG3-201ENST00000413987 Q6ZS92 163 aa7.72□□□□□ -1.17
SNHG3-201ENST00000413987 SLC25A48Q6ZT89 311 aaKnown RBP7.72□□□□□ -1.17
SNHG3-201ENST00000413987 FAM57BQ71RH2 274 aa7.72□□□□□ -1.17
SNHG3-201ENST00000413987 ZIC4Q8N9L1 334 aa7.72□□□□□ -1.17
SNHG3-201ENST00000413987 CYYR1Q96J86 154 aa7.72□□□□□ -1.17
SNHG3-201ENST00000413987 TP53RKQ96S44 253 aa7.72□□□□□ -1.17
SNHG3-201ENST00000413987 SIGMAR1Q99720 223 aa7.72□□□□□ -1.17
SNHG3-201ENST00000413987 HDHD3Q9BSH5 251 aaPredicted RBP7.72□□□□□ -1.17
SNHG3-201ENST00000413987 CXXC4Q9H2H0 198 aa7.72□□□□□ -1.17
SNHG3-201ENST00000413987 AAMDCQ9H7C9 122 aa7.72□□□□□ -1.17
SNHG3-201ENST00000413987 LHFPL6Q9Y693 200 aa7.72□□□□□ -1.17
SNHG3-201ENST00000413987 DOCK7Q96N67 2140 aa7.72□□□□□ -1.17
SNHG3-201ENST00000413987 TCF21O43680 179 aa7.72□□□□□ -1.17
SNHG3-201ENST00000413987 NUDT3O95989 172 aa7.72□□□□□ -1.17
SNHG3-201ENST00000413987 OXTP01178 125 aa7.72□□□□□ -1.17
SNHG3-201ENST00000413987 CD55P08174 381 aa7.72□□□□□ -1.17
SNHG3-201ENST00000413987 XGP55808 180 aa7.72□□□□□ -1.17
SNHG3-201ENST00000413987 ENDOGQ14249 297 aaKnown RBP7.72□□□□□ -1.17
SNHG3-201ENST00000413987 LCN15Q6UWW0 184 aa7.72□□□□□ -1.17
SNHG3-201ENST00000413987 IGFL3Q6UXB1 125 aa7.72□□□□□ -1.17
SNHG3-201ENST00000413987 OXGR1Q96P68 337 aa7.72□□□□□ -1.17
SNHG3-201ENST00000413987 DUX3Q96PT4 197 aa7.72□□□□□ -1.17
SNHG3-201ENST00000413987 RPRMQ9NS64 109 aa7.72□□□□□ -1.17
SNHG3-201ENST00000413987 C20orf202A1L168 122 aa7.71□□□□□ -1.17
SNHG3-201ENST00000413987 OVOL3O00110 214 aa7.71□□□□□ -1.17
SNHG3-201ENST00000413987 HOXA3O43365 443 aaPredicted RBP7.71□□□□□ -1.17
SNHG3-201ENST00000413987 ZNF737O75373 536 aa7.71□□□□□ -1.17
SNHG3-201ENST00000413987 DHRS3O75911 302 aa7.71□□□□□ -1.17
SNHG3-201ENST00000413987 IGLV3-1P01715 115 aa7.71□□□□□ -1.17
SNHG3-201ENST00000413987 VDAC1P21796 283 aa7.71□□□□□ -1.17
SNHG3-201ENST00000413987 OPRM1P35372 400 aa7.71□□□□□ -1.17
SNHG3-201ENST00000413987 KLF3P57682 345 aaPredicted RBP7.71□□□□□ -1.17
SNHG3-201ENST00000413987 TPPP2P59282 170 aa7.71□□□□□ -1.17
SNHG3-201ENST00000413987 CKS1BP61024 79 aa7.71□□□□□ -1.17
SNHG3-201ENST00000413987 ZNF154Q13106 437 aa7.71□□□□□ -1.17
SNHG3-201ENST00000413987 LRRC75BQ2VPJ9 315 aa7.71□□□□□ -1.17
SNHG3-201ENST00000413987 GAGE13Q4V321 117 aa7.71□□□□□ -1.17
SNHG3-201ENST00000413987 CRIP3Q6Q6R5 217 aa7.71□□□□□ -1.17
SNHG3-201ENST00000413987 ODF3L1Q8IXM7 274 aa7.71□□□□□ -1.17
SNHG3-201ENST00000413987 LINC01561Q8N1V8 128 aa7.71□□□□□ -1.17
SNHG3-201ENST00000413987 KIR3DL3Q8N743 410 aa7.71□□□□□ -1.17
SNHG3-201ENST00000413987 OR5B3Q8NH48 314 aa7.71□□□□□ -1.17
SNHG3-201ENST00000413987 NEU4Q8WWR8 484 aaPredicted RBP7.71□□□□□ -1.17
SNHG3-201ENST00000413987 IL22RA2Q969J5 263 aa7.71□□□□□ -1.17
SNHG3-201ENST00000413987 RBKSQ9H477 322 aa7.71□□□□□ -1.17
SNHG3-201ENST00000413987 TMEM106BQ9NUM4 274 aa7.71□□□□□ -1.17
SNHG3-201ENST00000413987 ZNF319Q9P2F9 582 aa7.71□□□□□ -1.17
SNHG3-201ENST00000413987 U3KQE9 123 aa7.71□□□□□ -1.17
SNHG3-201ENST00000413987 RTTNQ86VV8 2226 aa7.71□□□□□ -1.18
SNHG3-201ENST00000413987 HAX1O00165 279 aa7.71□□□□□ -1.18
SNHG3-201ENST00000413987 ZG16O60844 167 aa7.71□□□□□ -1.18
SNHG3-201ENST00000413987 IGHG1P01857 330 aa7.71□□□□□ -1.18
SNHG3-201ENST00000413987 PLA2G1BP04054 148 aaKnown RBP7.71□□□□□ -1.18
SNHG3-201ENST00000413987 MDH2P40926 338 aaKnown RBP7.71□□□□□ -1.18
SNHG3-201ENST00000413987 PSMB3P49720 205 aa7.71□□□□□ -1.18
SNHG3-201ENST00000413987 GNB2P62879 340 aa7.71□□□□□ -1.18
SNHG3-201ENST00000413987 MEF2BQ02080 365 aaPredicted RBP7.71□□□□□ -1.18
SNHG3-201ENST00000413987 TOMM20LQ6UXN7 152 aa7.71□□□□□ -1.18
SNHG3-201ENST00000413987 RPRMLQ8N4K4 120 aa7.71□□□□□ -1.18
SNHG3-201ENST00000413987 C11orf42Q8N5U0 333 aa7.71□□□□□ -1.18
SNHG3-201ENST00000413987 ORAOV1Q8WV07 137 aa7.71□□□□□ -1.18
SNHG3-201ENST00000413987 TRAPPC1Q9Y5R8 145 aa7.71□□□□□ -1.18
SNHG3-201ENST00000413987 COL6A6A6NMZ7 2263 aa7.7□□□□□ -1.18
SNHG3-201ENST00000413987 MLNRO43193 412 aa7.7□□□□□ -1.18
SNHG3-201ENST00000413987 PPYP01298 95 aa7.7□□□□□ -1.18
SNHG3-201ENST00000413987 CD99P14209 185 aa7.7□□□□□ -1.18
SNHG3-201ENST00000413987 SELEP16581 610 aa7.7□□□□□ -1.18
SNHG3-201ENST00000413987 HOXD3P31249 432 aaPredicted RBP7.7□□□□□ -1.18
SNHG3-201ENST00000413987 SELENOTP62341 195 aa7.7□□□□□ -1.18
SNHG3-201ENST00000413987 ANXA2RQ3ZCQ2 193 aa7.7□□□□□ -1.18
SNHG3-201ENST00000413987 TMEM97Q5BJF2 176 aa7.7□□□□□ -1.18
SNHG3-201ENST00000413987 SLC35E1Q96K37 410 aa7.7□□□□□ -1.18
SNHG3-201ENST00000413987 GPHA2Q96T91 129 aa7.7□□□□□ -1.18
SNHG3-201ENST00000413987 VAMP8Q9BV40 100 aa7.7□□□□□ -1.18
SNHG3-201ENST00000413987 SPANXA1Q9NS26 97 aa7.7□□□□□ -1.18
SNHG3-201ENST00000413987 AURKAIP1Q9NWT8 199 aaPredicted RBP7.7□□□□□ -1.18
SNHG3-201ENST00000413987 OR1A1Q9P1Q5 309 aa7.7□□□□□ -1.18
SNHG3-201ENST00000413987 JPT1Q9UK76 154 aa7.7□□□□□ -1.18
SNHG3-201ENST00000413987 RBM7Q9Y580 266 aaKnown RBP7.7□□□□□ -1.18
SNHG3-201ENST00000413987 MED12LQ86YW9 2145 aa7.7□□□□□ -1.18
SNHG3-201ENST00000413987 SLC17A3O00476 420 aa7.7□□□□□ -1.18
SNHG3-201ENST00000413987 SLC25A6P12236 298 aa7.7□□□□□ -1.18
SNHG3-201ENST00000413987 FKBP2P26885 142 aaKnown RBP7.7□□□□□ -1.18
SNHG3-201ENST00000413987 CHRNB4P30926 498 aa7.7□□□□□ -1.18
SNHG3-201ENST00000413987 FOXG1P55316 489 aaPredicted RBP7.7□□□□□ -1.18
SNHG3-201ENST00000413987 EDDM3AQ14507 147 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms