RNA–Protein interactions for RNA: ENST00000413380.5

HDAC9-206, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-206ENST00000413380 REG1AP05451 166 aa9.06□□□□□ -0.96
HDAC9-206ENST00000413380 ELANEP08246 267 aa9.06□□□□□ -0.96
HDAC9-206ENST00000413380 APELAP0DMC3 54 aa9.06□□□□□ -0.96
HDAC9-206ENST00000413380 HIST1H1BP16401 226 aaKnown RBP9.06□□□□□ -0.96
HDAC9-206ENST00000413380 SNCAP37840 140 aa9.06□□□□□ -0.96
HDAC9-206ENST00000413380 PROK1P58294 105 aa9.06□□□□□ -0.96
HDAC9-206ENST00000413380 VAMP2P63027 116 aa9.06□□□□□ -0.96
HDAC9-206ENST00000413380 CD300CQ08708 224 aa9.06□□□□□ -0.96
HDAC9-206ENST00000413380 FOXE3Q13461 319 aa9.06□□□□□ -0.96
HDAC9-206ENST00000413380 TMEM252Q8N6L7 170 aa9.06□□□□□ -0.96
HDAC9-206ENST00000413380 AQP10Q96PS8 301 aa9.06□□□□□ -0.96
HDAC9-206ENST00000413380 SLA2Q9H6Q3 261 aa9.06□□□□□ -0.96
HDAC9-206ENST00000413380 LINC00527Q9UJ94 153 aa9.06□□□□□ -0.96
HDAC9-206ENST00000413380 TNFSF18Q9UNG2 199 aa9.06□□□□□ -0.96
HDAC9-206ENST00000413380 TENM1Q9UKZ4 2725 aa9.06□□□□□ -0.96
HDAC9-206ENST00000413380 PSMB11A5LHX3 300 aa9.05□□□□□ -0.96
HDAC9-206ENST00000413380 H3BP45 60 aa9.05□□□□□ -0.96
HDAC9-206ENST00000413380 IFNA10P01566 189 aa9.05□□□□□ -0.96
HDAC9-206ENST00000413380 RAB11AP62491 216 aa9.05□□□□□ -0.96
HDAC9-206ENST00000413380 SLC35B1P78383 322 aa9.05□□□□□ -0.96
HDAC9-206ENST00000413380 SRSF2Q01130 221 aaKnown RBP9.05□□□□□ -0.96
HDAC9-206ENST00000413380 BAXQ07812 192 aa9.05□□□□□ -0.96
HDAC9-206ENST00000413380 EXOSC2Q13868 293 aaKnown RBP9.05□□□□□ -0.96
HDAC9-206ENST00000413380 ARSJQ5FYB0 599 aaPredicted RBP9.05□□□□□ -0.96
HDAC9-206ENST00000413380 SPANXN5Q5MJ07 72 aa9.05□□□□□ -0.96
HDAC9-206ENST00000413380 C19orf35Q6ZS72 473 aa9.05□□□□□ -0.96
HDAC9-206ENST00000413380 LURAP1LQ8IV03 231 aa9.05□□□□□ -0.96
HDAC9-206ENST00000413380 OR5T1Q8NG75 326 aa9.05□□□□□ -0.96
HDAC9-206ENST00000413380 OR11H4Q8NGC9 324 aa9.05□□□□□ -0.96
HDAC9-206ENST00000413380 TAF15Q92804 592 aaKnown RBP eCLIP9.05□□□□□ -0.96
HDAC9-206ENST00000413380 ATP6V0BQ99437 205 aa9.05□□□□□ -0.96
HDAC9-206ENST00000413380 SLC25A31Q9H0C2 315 aa9.05□□□□□ -0.96
HDAC9-206ENST00000413380 COL6A5A8TX70 2615 aa9.04□□□□□ -0.96
HDAC9-206ENST00000413380 FBN1P35555 2871 aaKnown RBP9.04□□□□□ -0.96
HDAC9-206ENST00000413380 IGSF23A1L1A6 192 aa9.04□□□□□ -0.96
HDAC9-206ENST00000413380 RNF222A6NCQ9 220 aa9.04□□□□□ -0.96
HDAC9-206ENST00000413380 FAM24AA6NFZ4 105 aa9.04□□□□□ -0.96
HDAC9-206ENST00000413380 FAM223BA6NKX1 122 aa9.04□□□□□ -0.96
HDAC9-206ENST00000413380 FNDC10F2Z333 226 aa9.04□□□□□ -0.96
HDAC9-206ENST00000413380 SMLR1H3BR10 107 aa9.04□□□□□ -0.96
HDAC9-206ENST00000413380 I3L2K1 104 aa9.04□□□□□ -0.96
HDAC9-206ENST00000413380 K7EIM0 57 aa9.04□□□□□ -0.96
HDAC9-206ENST00000413380 DEFA4P12838 97 aa9.04□□□□□ -0.96
HDAC9-206ENST00000413380 FCGR2BP31994 310 aaPredicted RBP9.04□□□□□ -0.96
HDAC9-206ENST00000413380 SULT1A1P50225 295 aa9.04□□□□□ -0.96
HDAC9-206ENST00000413380 CAV2P51636 162 aa9.04□□□□□ -0.96
HDAC9-206ENST00000413380 FOXL1Q12952 345 aa9.04□□□□□ -0.96
HDAC9-206ENST00000413380 KIAA0141Q14154 515 aaPredicted RBP9.04□□□□□ -0.96
HDAC9-206ENST00000413380 ZNF345Q14585 488 aa9.04□□□□□ -0.96
HDAC9-206ENST00000413380 TEX38Q6PEX7 206 aa9.04□□□□□ -0.96
HDAC9-206ENST00000413380 ZNF546Q86UE3 836 aa9.04□□□□□ -0.96
HDAC9-206ENST00000413380 HAPLN4Q86UW8 402 aa9.04□□□□□ -0.96
HDAC9-206ENST00000413380 FAM223AQ8IWN6 122 aa9.04□□□□□ -0.96
HDAC9-206ENST00000413380 KLHDC1Q8N7A1 406 aa9.04□□□□□ -0.96
HDAC9-206ENST00000413380 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.04□□□□□ -0.96
HDAC9-206ENST00000413380 NECAP1Q8NC96 275 aa9.04□□□□□ -0.96
HDAC9-206ENST00000413380 WFDC12Q8WWY7 111 aa9.04□□□□□ -0.96
HDAC9-206ENST00000413380 CACNG8Q8WXS5 425 aa9.04□□□□□ -0.96
HDAC9-206ENST00000413380 DCUN1D4Q92564 292 aa9.04□□□□□ -0.96
HDAC9-206ENST00000413380 HYLS1Q96M11 299 aa9.04□□□□□ -0.96
HDAC9-206ENST00000413380 GGACTQ9BVM4 153 aa9.04□□□□□ -0.96
HDAC9-206ENST00000413380 THYN1Q9P016 225 aa9.04□□□□□ -0.96
HDAC9-206ENST00000413380 RNF114Q9Y508 228 aa9.04□□□□□ -0.96
HDAC9-206ENST00000413380 PFDN1O60925 122 aa9.03□□□□□ -0.96
HDAC9-206ENST00000413380 OR8U8P0C7N1 319 aa9.03□□□□□ -0.96
HDAC9-206ENST00000413380 METTL15P1P0C7V9 234 aa9.03□□□□□ -0.96
HDAC9-206ENST00000413380 MDKP21741 143 aaPredicted RBP9.03□□□□□ -0.96
HDAC9-206ENST00000413380 RPL12P30050 165 aaKnown RBP9.03□□□□□ -0.96
HDAC9-206ENST00000413380 GPX4P36969 197 aaPredicted RBP9.03□□□□□ -0.96
HDAC9-206ENST00000413380 RAB9AP51151 201 aa9.03□□□□□ -0.96
HDAC9-206ENST00000413380 EWSR1Q01844 656 aaKnown RBP eCLIP9.03□□□□□ -0.96
HDAC9-206ENST00000413380 CD69Q07108 199 aa9.03□□□□□ -0.96
HDAC9-206ENST00000413380 KRTAP24-1Q3LI83 254 aa9.03□□□□□ -0.96
HDAC9-206ENST00000413380 ETV3LQ6ZN32 361 aa9.03□□□□□ -0.96
HDAC9-206ENST00000413380 ACOT7LQ6ZUV0 252 aa9.03□□□□□ -0.96
HDAC9-206ENST00000413380 ZNF329Q86UD4 541 aa9.03□□□□□ -0.96
HDAC9-206ENST00000413380 STX12Q86Y82 276 aa9.03□□□□□ -0.96
HDAC9-206ENST00000413380 VN1R17PQ8TDU5 208 aa9.03□□□□□ -0.96
HDAC9-206ENST00000413380 USMG5Q96IX5 58 aa9.03□□□□□ -0.96
HDAC9-206ENST00000413380 FNDC4Q9H6D8 234 aaPredicted RBP9.03□□□□□ -0.96
HDAC9-206ENST00000413380 HSPB11Q9Y547 144 aa9.03□□□□□ -0.96
HDAC9-206ENST00000413380 FXYD6-FXYD2A0A087WZ82 144 aa9.02□□□□□ -0.97
HDAC9-206ENST00000413380 PRH1P02810 166 aa9.02□□□□□ -0.97
HDAC9-206ENST00000413380 IFNA4P05014 189 aa9.02□□□□□ -0.97
HDAC9-206ENST00000413380 DLK1P80370 383 aa9.02□□□□□ -0.97
HDAC9-206ENST00000413380 RHOGP84095 191 aa9.02□□□□□ -0.97
HDAC9-206ENST00000413380 ARL16Q0P5N6 197 aa9.02□□□□□ -0.97
HDAC9-206ENST00000413380 OR2F1Q13607 317 aa9.02□□□□□ -0.97
HDAC9-206ENST00000413380 VWC2Q2TAL6 325 aa9.02□□□□□ -0.97
HDAC9-206ENST00000413380 TCTEX1D4Q5JR98 221 aa9.02□□□□□ -0.97
HDAC9-206ENST00000413380 SLC25A24Q6NUK1 477 aa9.02□□□□□ -0.97
HDAC9-206ENST00000413380 C10orf99Q6UWK7 81 aa9.02□□□□□ -0.97
HDAC9-206ENST00000413380 CENPVQ7Z7K6 275 aaPredicted RBP9.02□□□□□ -0.97
HDAC9-206ENST00000413380 OR10P1Q8NGE3 313 aa9.02□□□□□ -0.97
HDAC9-206ENST00000413380 PINX1Q96BK5 328 aaKnown RBP9.02□□□□□ -0.97
HDAC9-206ENST00000413380 PPP1R14BQ96C90 147 aa9.02□□□□□ -0.97
HDAC9-206ENST00000413380 KLK15Q9H2R5 256 aa9.02□□□□□ -0.97
HDAC9-206ENST00000413380 STAB1Q9NY15 2570 aa9.01□□□□□ -0.97
HDAC9-206ENST00000413380 A0A0G2JLM5 398 aa9.01□□□□□ -0.97
HDAC9-206ENST00000413380 RPS10-NUDT3A0A1W2PQS6 291 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms