RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 RBPMS2Q6ZRY4 209 aaKnown RBP7.65□□□□□ -1.18
NCKIPSD-202ENST00000413374 SELENOHQ8IZQ5 122 aaKnown RBP7.65□□□□□ -1.18
NCKIPSD-202ENST00000413374 SLC35G3Q8N808 338 aa7.65□□□□□ -1.18
NCKIPSD-202ENST00000413374 LHFPL5Q8TAF8 219 aa7.65□□□□□ -1.18
NCKIPSD-202ENST00000413374 SOSTQ9BQB4 213 aa7.65□□□□□ -1.18
NCKIPSD-202ENST00000413374 PDCD10Q9BUL8 212 aa7.65□□□□□ -1.18
NCKIPSD-202ENST00000413374 NAA60Q9H7X0 242 aa7.65□□□□□ -1.18
NCKIPSD-202ENST00000413374 SRD5A3Q9H8P0 318 aa7.65□□□□□ -1.18
NCKIPSD-202ENST00000413374 RETNQ9HD89 108 aa7.65□□□□□ -1.18
NCKIPSD-202ENST00000413374 MRPL27Q9P0M9 148 aaKnown RBP7.65□□□□□ -1.18
NCKIPSD-202ENST00000413374 RBMY1BA6NDE4 496 aaKnown RBP7.64□□□□□ -1.19
NCKIPSD-202ENST00000413374 RBMY1EA6NEQ0 496 aaKnown RBP7.64□□□□□ -1.19
NCKIPSD-202ENST00000413374 A8MWP6 167 aa7.64□□□□□ -1.19
NCKIPSD-202ENST00000413374 NDUFA4O00483 81 aa7.64□□□□□ -1.19
NCKIPSD-202ENST00000413374 RBMY1DP0C7P1 496 aaKnown RBP7.64□□□□□ -1.19
NCKIPSD-202ENST00000413374 P0C879 139 aa7.64□□□□□ -1.19
NCKIPSD-202ENST00000413374 C8orf88P0DMB2 117 aa7.64□□□□□ -1.19
NCKIPSD-202ENST00000413374 AKR1C4P17516 323 aa7.64□□□□□ -1.19
NCKIPSD-202ENST00000413374 HOXA1P49639 335 aaPredicted RBP7.64□□□□□ -1.19
NCKIPSD-202ENST00000413374 TMEM268Q5VZI3 342 aa7.64□□□□□ -1.19
NCKIPSD-202ENST00000413374 SPSB3Q6PJ21 355 aa7.64□□□□□ -1.19
NCKIPSD-202ENST00000413374 OR52B4Q8NGK2 314 aa7.64□□□□□ -1.19
NCKIPSD-202ENST00000413374 GLYATL2Q8WU03 294 aa7.64□□□□□ -1.19
NCKIPSD-202ENST00000413374 TMEM190Q8WZ59 177 aa7.64□□□□□ -1.19
NCKIPSD-202ENST00000413374 GPR146Q96CH1 333 aa7.64□□□□□ -1.19
NCKIPSD-202ENST00000413374 TM2D3Q9BRN9 247 aa7.64□□□□□ -1.19
NCKIPSD-202ENST00000413374 NXF2Q9GZY0 626 aaKnown RBP7.64□□□□□ -1.19
NCKIPSD-202ENST00000413374 TMEM222Q9H0R3 208 aa7.64□□□□□ -1.19
NCKIPSD-202ENST00000413374 ENY2Q9NPA8 101 aa7.64□□□□□ -1.19
NCKIPSD-202ENST00000413374 UBQLN2Q9UHD9 624 aa7.64□□□□□ -1.19
NCKIPSD-202ENST00000413374 KMT2CQ8NEZ4 4911 aaKnown RBP7.64□□□□□ -1.19
NCKIPSD-202ENST00000413374 COL7A1Q02388 2944 aa7.63□□□□□ -1.19
NCKIPSD-202ENST00000413374 IGKV3-7A0A075B6H7 116 aa7.63□□□□□ -1.19
NCKIPSD-202ENST00000413374 IGHV3OR16-13A0A075B7E8 117 aa7.63□□□□□ -1.19
NCKIPSD-202ENST00000413374 IGHV3-74A0A0B4J1X5 117 aa7.63□□□□□ -1.19
NCKIPSD-202ENST00000413374 CRYM-AS1A6NIL9 109 aa7.63□□□□□ -1.19
NCKIPSD-202ENST00000413374 NUPL2O15504 423 aaKnown RBP7.63□□□□□ -1.19
NCKIPSD-202ENST00000413374 GNG7O60262 68 aa7.63□□□□□ -1.19
NCKIPSD-202ENST00000413374 CDS2O95674 445 aa7.63□□□□□ -1.19
NCKIPSD-202ENST00000413374 ELLP55199 621 aaPredicted RBP7.63□□□□□ -1.19
NCKIPSD-202ENST00000413374 DHODHQ02127 395 aa7.63□□□□□ -1.19
NCKIPSD-202ENST00000413374 SLC16A13Q7RTY0 426 aa7.63□□□□□ -1.19
NCKIPSD-202ENST00000413374 MARC2Q969Z3 335 aa7.63□□□□□ -1.19
NCKIPSD-202ENST00000413374 PRRT1Q99946 306 aa7.63□□□□□ -1.19
NCKIPSD-202ENST00000413374 FAM110AQ9BQ89 295 aa7.63□□□□□ -1.19
NCKIPSD-202ENST00000413374 RABL2AQ9UBK7 228 aaPredicted RBP7.63□□□□□ -1.19
NCKIPSD-202ENST00000413374 SCP2D1Q9UJQ7 156 aa7.63□□□□□ -1.19
NCKIPSD-202ENST00000413374 RABL2BQ9UNT1 228 aa7.63□□□□□ -1.19
NCKIPSD-202ENST00000413374 SORL1Q92673 2214 aa7.63□□□□□ -1.19
NCKIPSD-202ENST00000413374 IGHV3-66A0A0C4DH42 116 aa7.62□□□□□ -1.19
NCKIPSD-202ENST00000413374 RNASE2P10153 161 aaKnown RBP7.62□□□□□ -1.19
NCKIPSD-202ENST00000413374 TFPI2P48307 235 aa7.62□□□□□ -1.19
NCKIPSD-202ENST00000413374 SUB1P53999 127 aaKnown RBP eCLIP7.62□□□□□ -1.19
NCKIPSD-202ENST00000413374 SURF2Q15527 256 aaPredicted RBP7.62□□□□□ -1.19
NCKIPSD-202ENST00000413374 ZFAND6Q6FIF0 208 aa7.62□□□□□ -1.19
NCKIPSD-202ENST00000413374 LINC00322Q6ZN03 302 aaPredicted RBP7.62□□□□□ -1.19
NCKIPSD-202ENST00000413374 ZNF114Q8NC26 417 aa7.62□□□□□ -1.19
NCKIPSD-202ENST00000413374 DUSP18Q8NEJ0 188 aa7.62□□□□□ -1.19
NCKIPSD-202ENST00000413374 RBPMSQ93062 196 aaKnown RBP7.62□□□□□ -1.19
NCKIPSD-202ENST00000413374 TMEM230Q96A57 120 aa7.62□□□□□ -1.19
NCKIPSD-202ENST00000413374 ZNF414Q96IQ9 312 aa7.62□□□□□ -1.19
NCKIPSD-202ENST00000413374 SPATA25Q9BR10 227 aa7.62□□□□□ -1.19
NCKIPSD-202ENST00000413374 DAZ1Q9NQZ3 744 aaKnown RBP7.62□□□□□ -1.19
NCKIPSD-202ENST00000413374 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.62□□□□□ -1.19
NCKIPSD-202ENST00000413374 CACNG5Q9UF02 275 aa7.62□□□□□ -1.19
NCKIPSD-202ENST00000413374 KCNIP3Q9Y2W7 256 aa7.62□□□□□ -1.19
NCKIPSD-202ENST00000413374 RYR3Q15413 4870 aa7.61□□□□□ -1.19
NCKIPSD-202ENST00000413374 TRAV25A0A0B4J276 109 aa7.61□□□□□ -1.19
NCKIPSD-202ENST00000413374 CEBPZOSA8MTT3 80 aa7.61□□□□□ -1.19
NCKIPSD-202ENST00000413374 K7EMT4 169 aa7.61□□□□□ -1.19
NCKIPSD-202ENST00000413374 B3GALNT1O75752 331 aa7.61□□□□□ -1.19
NCKIPSD-202ENST00000413374 TMEM50AO95807 157 aa7.61□□□□□ -1.19
NCKIPSD-202ENST00000413374 S100A5P33763 92 aa7.61□□□□□ -1.19
NCKIPSD-202ENST00000413374 NPBWR1P48145 328 aa7.61□□□□□ -1.19
NCKIPSD-202ENST00000413374 RELQ04864 619 aaPredicted RBP7.61□□□□□ -1.19
NCKIPSD-202ENST00000413374 TMEM187Q14656 261 aa7.61□□□□□ -1.19
NCKIPSD-202ENST00000413374 ANKRD55Q3KP44 614 aa7.61□□□□□ -1.19
NCKIPSD-202ENST00000413374 LAMTOR1Q6IAA8 161 aa7.61□□□□□ -1.19
NCKIPSD-202ENST00000413374 LYZL2Q7Z4W2 148 aa7.61□□□□□ -1.19
NCKIPSD-202ENST00000413374 TMED4Q7Z7H5 227 aa7.61□□□□□ -1.19
NCKIPSD-202ENST00000413374 TOMM5Q8N4H5 51 aa7.61□□□□□ -1.19
NCKIPSD-202ENST00000413374 MUC7Q8TAX7 377 aa7.61□□□□□ -1.19
NCKIPSD-202ENST00000413374 SCGB3A2Q96PL1 93 aa7.61□□□□□ -1.19
NCKIPSD-202ENST00000413374 CITED4Q96RK1 184 aa7.61□□□□□ -1.19
NCKIPSD-202ENST00000413374 RNF2Q99496 336 aa7.61□□□□□ -1.19
NCKIPSD-202ENST00000413374 TXN2Q99757 166 aa7.61□□□□□ -1.19
NCKIPSD-202ENST00000413374 RHPN1-AS1Q9BWJ2 59 aa7.61□□□□□ -1.19
NCKIPSD-202ENST00000413374 HIPK2Q9H2X6 1198 aa7.61□□□□□ -1.19
NCKIPSD-202ENST00000413374 HEYLQ9NQ87 328 aaPredicted RBP7.61□□□□□ -1.19
NCKIPSD-202ENST00000413374 GAR1Q9NY12 217 aaKnown RBP7.61□□□□□ -1.19
NCKIPSD-202ENST00000413374 MRPL36Q9P0J6 103 aaKnown RBP7.61□□□□□ -1.19
NCKIPSD-202ENST00000413374 SMPXQ9UHP9 88 aa7.61□□□□□ -1.19
NCKIPSD-202ENST00000413374 V9GYH0 126 aa7.61□□□□□ -1.19
NCKIPSD-202ENST00000413374 TRAV14DV4A0A0A6YYC5 116 aa7.6□□□□□ -1.19
NCKIPSD-202ENST00000413374 IGHV7-4-1A0A0J9YVY3 117 aa7.6□□□□□ -1.19
NCKIPSD-202ENST00000413374 C15orf62A8K5M9 175 aa7.6□□□□□ -1.19
NCKIPSD-202ENST00000413374 C3orf84H3BNL1 204 aa7.6□□□□□ -1.19
NCKIPSD-202ENST00000413374 APOHP02749 345 aaPredicted RBP7.6□□□□□ -1.19
NCKIPSD-202ENST00000413374 OPRK1P41145 380 aa7.6□□□□□ -1.19
NCKIPSD-202ENST00000413374 SPCS3P61009 180 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms