RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 XKRY2A2RUG3 117 aa9.3□□□□□ -0.92
TRAFD1-202ENST00000412615 OR5G3P0C626 314 aa9.3□□□□□ -0.92
TRAFD1-202ENST00000412615 SUB1P53999 127 aaKnown RBP eCLIP9.3□□□□□ -0.921e-9■■■■■ 45.9
TRAFD1-202ENST00000412615 DIAPH2-AS1Q14236 149 aa9.3□□□□□ -0.92
TRAFD1-202ENST00000412615 SGMS2Q8NHU3 365 aa9.3□□□□□ -0.92
TRAFD1-202ENST00000412615 RNASEH2CQ8TDP1 164 aaKnown RBP9.3□□□□□ -0.92
TRAFD1-202ENST00000412615 TMEM37Q8WXS4 190 aa9.3□□□□□ -0.92
TRAFD1-202ENST00000412615 PACRGQ96M98 296 aaPredicted RBP9.3□□□□□ -0.92
TRAFD1-202ENST00000412615 PFDN5Q99471 154 aa9.3□□□□□ -0.92
TRAFD1-202ENST00000412615 HIST1H2BLQ99880 126 aa9.3□□□□□ -0.92
TRAFD1-202ENST00000412615 TRBV23-1A0A0A0MS06 115 aa9.3□□□□□ -0.92
TRAFD1-202ENST00000412615 IGHV1-8P0DP01 117 aa9.3□□□□□ -0.92
TRAFD1-202ENST00000412615 GATA2P23769 480 aaPredicted RBP9.3□□□□□ -0.92
TRAFD1-202ENST00000412615 VMA21Q3ZAQ7 101 aa9.3□□□□□ -0.92
TRAFD1-202ENST00000412615 DNLZQ5SXM8 178 aa9.3□□□□□ -0.92
TRAFD1-202ENST00000412615 TEX38Q6PEX7 206 aa9.3□□□□□ -0.92
TRAFD1-202ENST00000412615 RBM14Q96PK6 669 aaKnown RBP9.3□□□□□ -0.92
TRAFD1-202ENST00000412615 GVINP1Q7Z2Y8 2422 aa9.29□□□□□ -0.92
TRAFD1-202ENST00000412615 E7EUB6 86 aa9.29□□□□□ -0.92
TRAFD1-202ENST00000412615 OR7C2O60412 319 aa9.29□□□□□ -0.92
TRAFD1-202ENST00000412615 RNF2Q99496 336 aa9.29□□□□□ -0.92
TRAFD1-202ENST00000412615 ZNF430Q9H8G1 570 aaPredicted RBP9.29□□□□□ -0.92
TRAFD1-202ENST00000412615 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.29□□□□□ -0.92
TRAFD1-202ENST00000412615 IGLV2-23P01705 113 aa9.29□□□□□ -0.92
TRAFD1-202ENST00000412615 FAM87AP0C7U9 286 aa9.29□□□□□ -0.92
TRAFD1-202ENST00000412615 C8orf88P0DMB2 117 aa9.29□□□□□ -0.92
TRAFD1-202ENST00000412615 LGALS7P47929 136 aa9.29□□□□□ -0.92
TRAFD1-202ENST00000412615 OR2T6Q8NHC8 308 aa9.29□□□□□ -0.92
TRAFD1-202ENST00000412615 TNFRSF14Q92956 283 aa9.29□□□□□ -0.92
TRAFD1-202ENST00000412615 MRPL32Q9BYC8 188 aaKnown RBP9.29□□□□□ -0.92
TRAFD1-202ENST00000412615 TMEM133Q9H2Q1 129 aa9.29□□□□□ -0.92
TRAFD1-202ENST00000412615 ACACAQ13085 2346 aa9.29□□□□□ -0.92
TRAFD1-202ENST00000412615 MAP1BP46821 2468 aaKnown RBP9.29□□□□□ -0.92
TRAFD1-202ENST00000412615 ANKRD11Q6UB99 2663 aaPredicted RBP9.28□□□□□ -0.92
TRAFD1-202ENST00000412615 HNF1AP20823 631 aa9.28□□□□□ -0.92
TRAFD1-202ENST00000412615 PDLIM4P50479 330 aa9.28□□□□□ -0.92
TRAFD1-202ENST00000412615 CASP6P55212 293 aa9.28□□□□□ -0.92
TRAFD1-202ENST00000412615 WT1-ASQ06250 92 aa9.28□□□□□ -0.92
TRAFD1-202ENST00000412615 SLC25A33Q9BSK2 321 aa9.28□□□□□ -0.92
TRAFD1-202ENST00000412615 TRAPPC1Q9Y5R8 145 aa9.28□□□□□ -0.92
TRAFD1-202ENST00000412615 HELTA6NFD8 242 aa9.28□□□□□ -0.92
TRAFD1-202ENST00000412615 HIST1H1BP16401 226 aaKnown RBP9.28□□□□□ -0.92
TRAFD1-202ENST00000412615 RPL15P61313 204 aaKnown RBP9.28□□□□□ -0.92
TRAFD1-202ENST00000412615 C11orf42Q8N5U0 333 aa9.28□□□□□ -0.92
TRAFD1-202ENST00000412615 ZNF503Q96F45 646 aa9.28□□□□□ -0.92
TRAFD1-202ENST00000412615 EAF1Q96JC9 268 aaPredicted RBP9.28□□□□□ -0.92
TRAFD1-202ENST00000412615 DNAJC4Q9NNZ3 241 aa9.28□□□□□ -0.92
TRAFD1-202ENST00000412615 RALYQ9UKM9 306 aaKnown RBP9.28□□□□□ -0.92
TRAFD1-202ENST00000412615 TNCP24821 2201 aa9.28□□□□□ -0.92
TRAFD1-202ENST00000412615 A0A1W2PRE2 83 aa9.28□□□□□ -0.92
TRAFD1-202ENST00000412615 A6NJY4 79 aa9.28□□□□□ -0.92
TRAFD1-202ENST00000412615 CGB1A6NKQ9 187 aa9.28□□□□□ -0.92
TRAFD1-202ENST00000412615 SLC25A17O43808 307 aa9.28□□□□□ -0.92
TRAFD1-202ENST00000412615 COL8A2P25067 703 aa9.28□□□□□ -0.92
TRAFD1-202ENST00000412615 CRYBB3P26998 211 aa9.28□□□□□ -0.92
TRAFD1-202ENST00000412615 PPOXP50336 477 aa9.28□□□□□ -0.92
TRAFD1-202ENST00000412615 TRAV9-1A0A075B6T8 112 aa9.27□□□□□ -0.93
TRAFD1-202ENST00000412615 ENSAO43768 121 aaKnown RBP9.27□□□□□ -0.93
TRAFD1-202ENST00000412615 AMBPP02760 352 aa9.27□□□□□ -0.93
TRAFD1-202ENST00000412615 CNN1P51911 297 aaKnown RBP9.27□□□□□ -0.93
TRAFD1-202ENST00000412615 PRRX1P54821 245 aa9.27□□□□□ -0.93
TRAFD1-202ENST00000412615 C10orf55Q5SWW7 151 aa9.27□□□□□ -0.93
TRAFD1-202ENST00000412615 MRPL41Q8IXM3 137 aaKnown RBP9.27□□□□□ -0.93
TRAFD1-202ENST00000412615 IL36BQ9NZH7 164 aa9.27□□□□□ -0.93
TRAFD1-202ENST00000412615 APC2O95996 2303 aa9.27□□□□□ -0.93
TRAFD1-202ENST00000412615 K7EN84 100 aa9.27□□□□□ -0.93
TRAFD1-202ENST00000412615 GNG4P50150 75 aa9.27□□□□□ -0.93
TRAFD1-202ENST00000412615 ZNF90Q03938 601 aa9.27□□□□□ -0.93
TRAFD1-202ENST00000412615 TEX45Q8NA69 505 aa9.27□□□□□ -0.93
TRAFD1-202ENST00000412615 OR1L4Q8NGR5 311 aa9.27□□□□□ -0.93
TRAFD1-202ENST00000412615 LINC01560Q8TB33 94 aa9.27□□□□□ -0.93
TRAFD1-202ENST00000412615 NPIPB3Q92617 1050 aa9.27□□□□□ -0.93
TRAFD1-202ENST00000412615 FSTL3O95633 263 aa9.26□□□□□ -0.93
TRAFD1-202ENST00000412615 PLAUP00749 431 aa9.26□□□□□ -0.93
TRAFD1-202ENST00000412615 OR10J4P0C629 311 aa9.26□□□□□ -0.93
TRAFD1-202ENST00000412615 SELENOTP62341 195 aa9.26□□□□□ -0.93
TRAFD1-202ENST00000412615 CDPF1Q6NVV7 123 aa9.26□□□□□ -0.93
TRAFD1-202ENST00000412615 FNDC4Q9H6D8 234 aaPredicted RBP9.26□□□□□ -0.93
TRAFD1-202ENST00000412615 BSNQ9UPA5 3926 aa9.26□□□□□ -0.93
TRAFD1-202ENST00000412615 MUC6Q6W4X9 2439 aa9.26□□□□□ -0.93
TRAFD1-202ENST00000412615 TCRBV4S1A1TA0A5B7 111 aa9.26□□□□□ -0.93
TRAFD1-202ENST00000412615 PSMB11A5LHX3 300 aa9.26□□□□□ -0.93
TRAFD1-202ENST00000412615 COX7A2P2O60397 106 aa9.26□□□□□ -0.93
TRAFD1-202ENST00000412615 ERVFC1-1P60608 527 aa9.26□□□□□ -0.93
TRAFD1-202ENST00000412615 YPEL3P61236 119 aaPredicted RBP9.26□□□□□ -0.93
TRAFD1-202ENST00000412615 SUMO1P63165 101 aaKnown RBP9.26□□□□□ -0.93
TRAFD1-202ENST00000412615 SSX2Q16385 188 aa9.26□□□□□ -0.93
TRAFD1-202ENST00000412615 TMEM95Q3KNT9 176 aa9.26□□□□□ -0.93
TRAFD1-202ENST00000412615 ANKRD39Q53RE8 183 aa9.26□□□□□ -0.93
TRAFD1-202ENST00000412615 CENPWQ5EE01 88 aa9.26□□□□□ -0.93
TRAFD1-202ENST00000412615 MMD2Q8IY49 270 aa9.26□□□□□ -0.93
TRAFD1-202ENST00000412615 MUC15Q8N387 334 aa9.26□□□□□ -0.93
TRAFD1-202ENST00000412615 ROS1P08922 2347 aa9.25□□□□□ -0.93
TRAFD1-202ENST00000412615 IGHV2-26A0A0B4J1V2 119 aa9.25□□□□□ -0.93
TRAFD1-202ENST00000412615 A0A1W2PPI3 338 aa9.25□□□□□ -0.93
TRAFD1-202ENST00000412615 GGTLC3B5MD39 225 aa9.25□□□□□ -0.93
TRAFD1-202ENST00000412615 JOSD1Q15040 202 aaPredicted RBP9.25□□□□□ -0.93
TRAFD1-202ENST00000412615 FBXL19-AS1Q494R0 122 aa9.25□□□□□ -0.93
TRAFD1-202ENST00000412615 TIGITQ495A1 244 aa9.25□□□□□ -0.93
TRAFD1-202ENST00000412615 ETFRF1Q6IPR1 90 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms