RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 KLK11Q9UBX7 282 aa10.76□□□□□ -0.69
MCF2L-210ENST00000409954 CSMD3Q7Z407 3707 aa10.76□□□□□ -0.69
MCF2L-210ENST00000409954 IGHV3OR16-8A0A075B7F1 116 aa10.75□□□□□ -0.69
MCF2L-210ENST00000409954 M0QYG6 137 aa10.75□□□□□ -0.69
MCF2L-210ENST00000409954 B3GALNT1O75752 331 aa10.75□□□□□ -0.69
MCF2L-210ENST00000409954 LYG2Q86SG7 212 aa10.75□□□□□ -0.69
MCF2L-210ENST00000409954 LHFPL1Q86WI0 220 aa10.75□□□□□ -0.69
MCF2L-210ENST00000409954 TERB2Q8NHR7 220 aa10.75□□□□□ -0.69
MCF2L-210ENST00000409954 MAP6D1Q9H9H5 199 aa10.75□□□□□ -0.69
MCF2L-210ENST00000409954 MTFP1Q9UDX5 166 aa10.75□□□□□ -0.69
MCF2L-210ENST00000409954 SACSQ9NZJ4 4579 aa10.75□□□□□ -0.69
MCF2L-210ENST00000409954 A0A0J9YWU9 116 aa10.74□□□□□ -0.69
MCF2L-210ENST00000409954 C3orf85A0A1B0GTC6 90 aa10.74□□□□□ -0.69
MCF2L-210ENST00000409954 NUPR2A6NF83 97 aa10.74□□□□□ -0.69
MCF2L-210ENST00000409954 IFNA17P01571 189 aa10.74□□□□□ -0.69
MCF2L-210ENST00000409954 CD3DP04234 171 aa10.74□□□□□ -0.69
MCF2L-210ENST00000409954 PIGPP57054 158 aa10.74□□□□□ -0.69
MCF2L-210ENST00000409954 FAM90A2PQ658T7 463 aa10.74□□□□□ -0.69
MCF2L-210ENST00000409954 PINX1Q96BK5 328 aaKnown RBP10.74□□□□□ -0.69
MCF2L-210ENST00000409954 PDCD10Q9BUL8 212 aa10.74□□□□□ -0.69
MCF2L-210ENST00000409954 CSTL1Q9H114 145 aa10.74□□□□□ -0.69
MCF2L-210ENST00000409954 COPZ2Q9P299 210 aa10.74□□□□□ -0.69
MCF2L-210ENST00000409954 RYR2Q92736 4967 aa10.74□□□□□ -0.69
MCF2L-210ENST00000409954 DNAH1Q9P2D7 4330 aa10.73□□□□□ -0.69
MCF2L-210ENST00000409954 A0A0B4J293 547 aa10.73□□□□□ -0.69
MCF2L-210ENST00000409954 CXorf65A6NEN9 183 aa10.73□□□□□ -0.69
MCF2L-210ENST00000409954 CORTO00230 105 aa10.73□□□□□ -0.69
MCF2L-210ENST00000409954 TMEM50AO95807 157 aa10.73□□□□□ -0.69
MCF2L-210ENST00000409954 RPL35AP18077 110 aaKnown RBP10.73□□□□□ -0.69
MCF2L-210ENST00000409954 DEFB135Q30KP9 77 aa10.73□□□□□ -0.69
MCF2L-210ENST00000409954 PVRIGQ6DKI7 326 aa10.73□□□□□ -0.69
MCF2L-210ENST00000409954 CEMP1Q6PRD7 247 aaPredicted RBP10.73□□□□□ -0.69
MCF2L-210ENST00000409954 TOMM20LQ6UXN7 152 aa10.73□□□□□ -0.69
MCF2L-210ENST00000409954 ZNF600Q6ZNG1 722 aa10.73□□□□□ -0.69
MCF2L-210ENST00000409954 CCDC71LQ8N9Z2 235 aa10.73□□□□□ -0.69
MCF2L-210ENST00000409954 TMEM229BQ8NBD8 167 aa10.73□□□□□ -0.69
MCF2L-210ENST00000409954 OR52I2Q8NH67 350 aa10.73□□□□□ -0.69
MCF2L-210ENST00000409954 RRNAD1Q96FB5 475 aaKnown RBP10.73□□□□□ -0.69
MCF2L-210ENST00000409954 KLK5Q9Y337 293 aaPredicted RBP10.73□□□□□ -0.69
MCF2L-210ENST00000409954 MPTX1A8MV57 137 aa10.72□□□□□ -0.69
MCF2L-210ENST00000409954 DFFBO76075 338 aa10.72□□□□□ -0.69
MCF2L-210ENST00000409954 IGKV1-5P01602 117 aa10.72□□□□□ -0.69
MCF2L-210ENST00000409954 P0C879 139 aa10.72□□□□□ -0.69
MCF2L-210ENST00000409954 AKR1C2P52895 323 aa10.72□□□□□ -0.69
MCF2L-210ENST00000409954 SSBP1Q04837 148 aaKnown RBP10.72□□□□□ -0.69
MCF2L-210ENST00000409954 APRG1Q8IVJ8 170 aa10.72□□□□□ -0.69
MCF2L-210ENST00000409954 SLC35G3Q8N808 338 aa10.72□□□□□ -0.69
MCF2L-210ENST00000409954 GATAD1Q8WUU5 269 aa10.72□□□□□ -0.69
MCF2L-210ENST00000409954 ZNF414Q96IQ9 312 aa10.72□□□□□ -0.69
MCF2L-210ENST00000409954 TP53RKQ96S44 253 aa10.72□□□□□ -0.69
MCF2L-210ENST00000409954 ABHD1Q96SE0 405 aa10.72□□□□□ -0.69
MCF2L-210ENST00000409954 TMEM231Q9H6L2 316 aa10.72□□□□□ -0.69
MCF2L-210ENST00000409954 VSIRQ9H7M9 311 aa10.72□□□□□ -0.69
MCF2L-210ENST00000409954 ENY2Q9NPA8 101 aa10.72□□□□□ -0.69
MCF2L-210ENST00000409954 EXTL2Q9UBQ6 330 aa10.72□□□□□ -0.69
MCF2L-210ENST00000409954 STARD9Q9P2P6 4700 aa10.72□□□□□ -0.69
MCF2L-210ENST00000409954 TRAV2A0A0B4J234 112 aa10.71□□□□□ -0.69
MCF2L-210ENST00000409954 A0A1W2PS18 150 aa10.71□□□□□ -0.69
MCF2L-210ENST00000409954 DNASE2O00115 360 aaPredicted RBP10.71□□□□□ -0.69
MCF2L-210ENST00000409954 ST8SIA3O43173 380 aa10.71□□□□□ -0.69
MCF2L-210ENST00000409954 SCGB2A1O75556 95 aa10.71□□□□□ -0.69
MCF2L-210ENST00000409954 RAB3DO95716 219 aa10.71□□□□□ -0.69
MCF2L-210ENST00000409954 IGHV3-48P01763 117 aa10.71□□□□□ -0.69
MCF2L-210ENST00000409954 CD74P04233 296 aa10.71□□□□□ -0.69
MCF2L-210ENST00000409954 PI3P19957 117 aa10.71□□□□□ -0.69
MCF2L-210ENST00000409954 ETV6P41212 452 aa10.71□□□□□ -0.69
MCF2L-210ENST00000409954 RPL5P46777 297 aaKnown RBP10.71□□□□□ -0.69
MCF2L-210ENST00000409954 TFPI2P48307 235 aa10.71□□□□□ -0.69
MCF2L-210ENST00000409954 TAS2R19P59542 299 aa10.71□□□□□ -0.69
MCF2L-210ENST00000409954 MRPS10P82664 201 aaKnown RBP10.71□□□□□ -0.69
MCF2L-210ENST00000409954 CTF1Q16619 201 aa10.71□□□□□ -0.69
MCF2L-210ENST00000409954 IZUMO4Q1ZYL8 232 aa10.71□□□□□ -0.69
MCF2L-210ENST00000409954 TRIM16LQ309B1 348 aa10.71□□□□□ -0.69
MCF2L-210ENST00000409954 TCF24Q7RTU0 167 aa10.71□□□□□ -0.69
MCF2L-210ENST00000409954 FAM219AQ8IW50 185 aa10.71□□□□□ -0.69
MCF2L-210ENST00000409954 IGKV3-7A0A075B6H7 116 aa10.7□□□□□ -0.7
MCF2L-210ENST00000409954 TRAV30A0A087WSZ9 112 aa10.7□□□□□ -0.7
MCF2L-210ENST00000409954 IGHV3-49A0A0A0MS15 119 aa10.7□□□□□ -0.7
MCF2L-210ENST00000409954 GABARAPH6UMI1 98 aa10.7□□□□□ -0.7
MCF2L-210ENST00000409954 GABARAPO95166 117 aa10.7□□□□□ -0.7
MCF2L-210ENST00000409954 NPPCP23582 126 aa10.7□□□□□ -0.7
MCF2L-210ENST00000409954 UCP1P25874 307 aa10.7□□□□□ -0.7
MCF2L-210ENST00000409954 PMS2P11Q13670 270 aa10.7□□□□□ -0.7
MCF2L-210ENST00000409954 STEAP1BQ6NZ63 245 aa10.7□□□□□ -0.7
MCF2L-210ENST00000409954 OR52E5Q8NH55 327 aa10.7□□□□□ -0.7
MCF2L-210ENST00000409954 RARRES2Q99969 163 aa10.7□□□□□ -0.7
MCF2L-210ENST00000409954 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.7□□□□□ -0.7
MCF2L-210ENST00000409954 PUS1Q9Y606 427 aaKnown RBP eCLIP10.7□□□□□ -0.7
MCF2L-210ENST00000409954 LYSTQ99698 3801 aa10.7□□□□□ -0.7
MCF2L-210ENST00000409954 CLN5O75503 358 aa10.69□□□□□ -0.7
MCF2L-210ENST00000409954 CDS2O95674 445 aa10.69□□□□□ -0.7
MCF2L-210ENST00000409954 RNASE2P10153 161 aaKnown RBP10.69□□□□□ -0.7
MCF2L-210ENST00000409954 SPCS3P61009 180 aa10.69□□□□□ -0.7
MCF2L-210ENST00000409954 RPL11P62913 178 aaKnown RBP10.69□□□□□ -0.7
MCF2L-210ENST00000409954 MEF2DQ14814 521 aa10.69□□□□□ -0.7
MCF2L-210ENST00000409954 SP6Q3SY56 376 aa10.69□□□□□ -0.7
MCF2L-210ENST00000409954 SCGB2B2Q4G0G5 96 aa10.69□□□□□ -0.7
MCF2L-210ENST00000409954 SPINK9Q5DT21 86 aa10.69□□□□□ -0.7
MCF2L-210ENST00000409954 RNASE12Q5GAN4 147 aaKnown RBP10.69□□□□□ -0.7
MCF2L-210ENST00000409954 GPR107Q5VW38 600 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms