RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 NPIPB7O75200 414 aa7.07□□□□□ -1.28
SCN9A-203ENST00000409672 C8orf82Q6P1X6 216 aaPredicted RBP7.07□□□□□ -1.28
SCN9A-203ENST00000409672 C10orf126Q8N4M7 172 aa7.07□□□□□ -1.28
SCN9A-203ENST00000409672 C19orf24Q9BVV8 132 aa7.07□□□□□ -1.28
SCN9A-203ENST00000409672 WNT2P09544 360 aa7.07□□□□□ -1.28
SCN9A-203ENST00000409672 ZNF146Q15072 292 aa7.07□□□□□ -1.28
SCN9A-203ENST00000409672 H3BRM9 83 aa7.07□□□□□ -1.28
SCN9A-203ENST00000409672 HOXD3P31249 432 aaPredicted RBP7.07□□□□□ -1.28
SCN9A-203ENST00000409672 FAM74A3Q4VXF1 159 aa7.07□□□□□ -1.28
SCN9A-203ENST00000409672 JPT1Q9UK76 154 aa7.07□□□□□ -1.28
SCN9A-203ENST00000409672 CD300CQ08708 224 aa7.07□□□□□ -1.28
SCN9A-203ENST00000409672 PSG7Q13046 419 aa7.07□□□□□ -1.28
SCN9A-203ENST00000409672 CHAC2Q8WUX2 184 aa7.07□□□□□ -1.28
SCN9A-203ENST00000409672 WDYHV1Q96HA8 205 aa7.07□□□□□ -1.28
SCN9A-203ENST00000409672 DOCK4Q8N1I0 1966 aa7.07□□□□□ -1.28
SCN9A-203ENST00000409672 SUMO4Q6EEV6 95 aa7.07□□□□□ -1.28
SCN9A-203ENST00000409672 TMEM183AQ8IXX5 376 aa7.07□□□□□ -1.28
SCN9A-203ENST00000409672 OR5P3Q8WZ94 311 aa7.07□□□□□ -1.28
SCN9A-203ENST00000409672 RAB24Q969Q5 203 aa7.07□□□□□ -1.28
SCN9A-203ENST00000409672 MARF1Q9Y4F3 1742 aaKnown RBP7.07□□□□□ -1.28
SCN9A-203ENST00000409672 PRR30Q53SZ7 412 aaPredicted RBP7.07□□□□□ -1.28
SCN9A-203ENST00000409672 ZNF474Q6S9Z5 364 aaPredicted RBP7.07□□□□□ -1.28
SCN9A-203ENST00000409672 VCX2Q9H322 139 aa7.07□□□□□ -1.28
SCN9A-203ENST00000409672 ADAMTS9Q9P2N4 1935 aa7.07□□□□□ -1.28
SCN9A-203ENST00000409672 CA11O75493 328 aa7.07□□□□□ -1.28
SCN9A-203ENST00000409672 NBEAP1P0C6P0 100 aa7.07□□□□□ -1.28
SCN9A-203ENST00000409672 MBNL3Q9NUK0 354 aaKnown RBP7.06□□□□□ -1.28
SCN9A-203ENST00000409672 STRCP1A6NGW2 1772 aa7.06□□□□□ -1.28
SCN9A-203ENST00000409672 F5H768 121 aa7.06□□□□□ -1.28
SCN9A-203ENST00000409672 FHITP49789 147 aa7.06□□□□□ -1.28
SCN9A-203ENST00000409672 PMCHL1Q16048 86 aa7.06□□□□□ -1.28
SCN9A-203ENST00000409672 PRADC1Q9BSG0 188 aa7.06□□□□□ -1.28
SCN9A-203ENST00000409672 A0A1W2PPC1 479 aa7.06□□□□□ -1.28
SCN9A-203ENST00000409672 RCHY1Q96PM5 261 aa7.06□□□□□ -1.28
SCN9A-203ENST00000409672 ARID2Q68CP9 1835 aa7.06□□□□□ -1.28
SCN9A-203ENST00000409672 MLNRO43193 412 aa7.06□□□□□ -1.28
SCN9A-203ENST00000409672 FCN3O75636 299 aa7.06□□□□□ -1.28
SCN9A-203ENST00000409672 CD28P10747 220 aa7.06□□□□□ -1.28
SCN9A-203ENST00000409672 RPS20P60866 119 aaKnown RBP7.06□□□□□ -1.28
SCN9A-203ENST00000409672 TMEM54Q969K7 222 aa7.06□□□□□ -1.28
SCN9A-203ENST00000409672 NYNRINQ9P2P1 1898 aaKnown RBP7.06□□□□□ -1.28
SCN9A-203ENST00000409672 SCO2A0A1W2PP80 73 aa7.06□□□□□ -1.28
SCN9A-203ENST00000409672 TIMM23O14925 209 aa7.06□□□□□ -1.28
SCN9A-203ENST00000409672 RPL32P62910 135 aaKnown RBP7.06□□□□□ -1.28
SCN9A-203ENST00000409672 KCNE5Q9UJ90 142 aa7.06□□□□□ -1.28
SCN9A-203ENST00000409672 APOHP02749 345 aaPredicted RBP7.06□□□□□ -1.28
SCN9A-203ENST00000409672 FGF9P31371 208 aaPredicted RBP7.06□□□□□ -1.28
SCN9A-203ENST00000409672 LEPP41159 167 aa7.06□□□□□ -1.28
SCN9A-203ENST00000409672 GTF3AQ92664 365 aaKnown RBP7.06□□□□□ -1.28
SCN9A-203ENST00000409672 IMMP1LQ96LU5 166 aa7.06□□□□□ -1.28
SCN9A-203ENST00000409672 MESP1Q9BRJ9 268 aa7.06□□□□□ -1.28
SCN9A-203ENST00000409672 Q9H3A6 140 aa7.06□□□□□ -1.28
SCN9A-203ENST00000409672 C17orf98A8MV24 154 aa7.06□□□□□ -1.28
SCN9A-203ENST00000409672 TMEM50AO95807 157 aa7.06□□□□□ -1.28
SCN9A-203ENST00000409672 MYOD1P15172 320 aa7.06□□□□□ -1.28
SCN9A-203ENST00000409672 IGFL4Q6B9Z1 124 aa7.06□□□□□ -1.28
SCN9A-203ENST00000409672 FAM169BQ8N8A8 192 aa7.06□□□□□ -1.28
SCN9A-203ENST00000409672 RALGAPA2Q2PPJ7 1873 aa7.05□□□□□ -1.28
SCN9A-203ENST00000409672 HOXA5P20719 270 aa7.05□□□□□ -1.28
SCN9A-203ENST00000409672 NBR2O15453 112 aa7.05□□□□□ -1.28
SCN9A-203ENST00000409672 IL6RP08887 468 aaPredicted RBP7.05□□□□□ -1.28
SCN9A-203ENST00000409672 CBLN1P23435 193 aa7.05□□□□□ -1.28
SCN9A-203ENST00000409672 PAX8Q06710 450 aa7.05□□□□□ -1.28
SCN9A-203ENST00000409672 CLPSL2Q6UWE3 100 aa7.05□□□□□ -1.28
SCN9A-203ENST00000409672 PMCHL2Q9BQD1 86 aa7.05□□□□□ -1.28
SCN9A-203ENST00000409672 TMEM252Q8N6L7 170 aa7.05□□□□□ -1.28
SCN9A-203ENST00000409672 SLC25A39Q9BZJ4 359 aaPredicted RBP7.05□□□□□ -1.28
SCN9A-203ENST00000409672 LSM4Q9Y4Z0 139 aaKnown RBP7.05□□□□□ -1.28
SCN9A-203ENST00000409672 IGHV3-16A0A0C4DH30 117 aa7.05□□□□□ -1.28
SCN9A-203ENST00000409672 PINLYPA6NC86 204 aa7.05□□□□□ -1.28
SCN9A-203ENST00000409672 TMEM127O75204 238 aa7.05□□□□□ -1.28
SCN9A-203ENST00000409672 BCL2P10415 239 aa7.05□□□□□ -1.28
SCN9A-203ENST00000409672 CEACAM8P31997 349 aaPredicted RBP7.05□□□□□ -1.28
SCN9A-203ENST00000409672 PIP4P2Q8N4L2 257 aa7.05□□□□□ -1.28
SCN9A-203ENST00000409672 JPT2Q9H910 190 aa7.05□□□□□ -1.28
SCN9A-203ENST00000409672 OR10W1Q8NGF6 305 aa7.05□□□□□ -1.28
SCN9A-203ENST00000409672 NEUROG1Q92886 237 aa7.05□□□□□ -1.28
SCN9A-203ENST00000409672 TMEM45BQ96B21 275 aa7.05□□□□□ -1.28
SCN9A-203ENST00000409672 TMEM222Q9H0R3 208 aa7.05□□□□□ -1.28
SCN9A-203ENST00000409672 HEATR5AQ86XA9 2040 aa7.05□□□□□ -1.28
SCN9A-203ENST00000409672 IGKV2-40A0A087WW87 121 aaPredicted RBP7.05□□□□□ -1.28
SCN9A-203ENST00000409672 IGKV2D-40P01614 121 aaPredicted RBP7.05□□□□□ -1.28
SCN9A-203ENST00000409672 OR10S1Q8NGN2 331 aa7.05□□□□□ -1.28
SCN9A-203ENST00000409672 C14orf144Q96I85 54 aa7.05□□□□□ -1.28
SCN9A-203ENST00000409672 ZNF48Q96MX3 618 aaPredicted RBP7.05□□□□□ -1.28
SCN9A-203ENST00000409672 HBDP02042 147 aa7.05□□□□□ -1.28
SCN9A-203ENST00000409672 SIGLEC15Q6ZMC9 328 aa7.05□□□□□ -1.28
SCN9A-203ENST00000409672 IMMP2LQ96T52 175 aa7.05□□□□□ -1.28
SCN9A-203ENST00000409672 IGLV2-23P01705 113 aa7.04□□□□□ -1.28
SCN9A-203ENST00000409672 TMEM249Q2WGJ8 235 aa7.04□□□□□ -1.28
SCN9A-203ENST00000409672 TMEM250H0YL14 139 aa7.04□□□□□ -1.28
SCN9A-203ENST00000409672 PAX2Q02962 417 aa7.04□□□□□ -1.28
SCN9A-203ENST00000409672 ASPHD2Q6ICH7 369 aa7.04□□□□□ -1.28
SCN9A-203ENST00000409672 CHCHD2Q9Y6H1 151 aaPredicted RBP7.04□□□□□ -1.28
SCN9A-203ENST00000409672 GALP22466 123 aa7.04□□□□□ -1.28
SCN9A-203ENST00000409672 HOXC8P31273 242 aa7.04□□□□□ -1.28
SCN9A-203ENST00000409672 EGR4Q05215 589 aa7.04□□□□□ -1.28
SCN9A-203ENST00000409672 ZNF672Q499Z4 452 aaPredicted RBP7.04□□□□□ -1.28
SCN9A-203ENST00000409672 FAM206AQ9NX38 181 aa7.04□□□□□ -1.28
SCN9A-203ENST00000409672 NCKAP5O14513 1909 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms