RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, human

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUMO1-208	ENST00000409627	ATP5G2	Q06055	141 aa		12.89	□□□□□ -0.35
SUMO1-208	ENST00000409627	RAB32	Q13637	225 aa		12.89	□□□□□ -0.35
SUMO1-208	ENST00000409627	C15orf32	Q32M92	178 aa		12.89	□□□□□ -0.35
SUMO1-208	ENST00000409627	KLHL30-AS1	Q8NEE0	82 aa		12.89	□□□□□ -0.35
SUMO1-208	ENST00000409627	TMEM170A	Q8WVE7	144 aa		12.89	□□□□□ -0.35
SUMO1-208	ENST00000409627	SMIM8	Q96KF7	97 aa		12.89	□□□□□ -0.35
SUMO1-208	ENST00000409627	GNB4	Q9HAV0	340 aa		12.89	□□□□□ -0.35
SUMO1-208	ENST00000409627	LSM5	Q9Y4Y9	91 aa	Known RBP	12.89	□□□□□ -0.35
SUMO1-208	ENST00000409627		A0A1W2PRX2	142 aa		12.88	□□□□□ -0.35
SUMO1-208	ENST00000409627	LGALS1	P09382	135 aa	Known RBP	12.88	□□□□□ -0.35
SUMO1-208	ENST00000409627	TAS2R30	P59541	319 aa		12.88	□□□□□ -0.35
SUMO1-208	ENST00000409627	S100A10	P60903	97 aa		12.88	□□□□□ -0.35
SUMO1-208	ENST00000409627	RUNX1	Q01196	453 aa		12.88	□□□□□ -0.35
SUMO1-208	ENST00000409627	EXOSC2	Q13868	293 aa	Known RBP	12.88	□□□□□ -0.35
SUMO1-208	ENST00000409627	C18orf65	Q6ZTR6	163 aa		12.88	□□□□□ -0.35
SUMO1-208	ENST00000409627	VN1R17P	Q8TDU5	208 aa		12.88	□□□□□ -0.35
SUMO1-208	ENST00000409627	ASB13	Q8WXK3	278 aa		12.88	□□□□□ -0.35
SUMO1-208	ENST00000409627	MISP3	Q96FF7	219 aa		12.88	□□□□□ -0.35
SUMO1-208	ENST00000409627	CXorf58	Q96LI9	332 aa		12.88	□□□□□ -0.35
SUMO1-208	ENST00000409627	C11orf1	Q9H5F2	150 aa		12.88	□□□□□ -0.35
SUMO1-208	ENST00000409627	C15orf62	A8K5M9	175 aa		12.87	□□□□□ -0.35
SUMO1-208	ENST00000409627	NUDT19	A8MXV4	375 aa		12.87	□□□□□ -0.35
SUMO1-208	ENST00000409627		I3L2K1	104 aa		12.87	□□□□□ -0.35
SUMO1-208	ENST00000409627		I3L521	148 aa		12.87	□□□□□ -0.35
SUMO1-208	ENST00000409627		K7EIM0	57 aa		12.87	□□□□□ -0.35
SUMO1-208	ENST00000409627	TSC22D2	O75157	780 aa		12.87	□□□□□ -0.35
SUMO1-208	ENST00000409627	TMEM50A	O95807	157 aa		12.87	□□□□□ -0.35
SUMO1-208	ENST00000409627	IGHV3-11	P01762	117 aa		12.87	□□□□□ -0.35
SUMO1-208	ENST00000409627	PAX9	P55771	341 aa		12.87	□□□□□ -0.35
SUMO1-208	ENST00000409627	NSUN5P1	Q3KNT7	163 aa		12.87	□□□□□ -0.35
SUMO1-208	ENST00000409627	FAM209B	Q5JX69	171 aa		12.87	□□□□□ -0.35
SUMO1-208	ENST00000409627	ZNF343	Q6P1L6	599 aa		12.87	□□□□□ -0.35
SUMO1-208	ENST00000409627	RNASEH2C	Q8TDP1	164 aa	Known RBP	12.87	□□□□□ -0.35
SUMO1-208	ENST00000409627	EEF1AKMT3	Q96AZ1	226 aa		12.87	□□□□□ -0.35
SUMO1-208	ENST00000409627	WDR89	Q96FK6	387 aa	Predicted RBP	12.87	□□□□□ -0.35
SUMO1-208	ENST00000409627	OR4C12	Q96R67	309 aa		12.87	□□□□□ -0.35
SUMO1-208	ENST00000409627	ZNF436	Q9C0F3	470 aa	Predicted RBP	12.87	□□□□□ -0.35
SUMO1-208	ENST00000409627	PSENEN	Q9NZ42	101 aa		12.87	□□□□□ -0.35
SUMO1-208	ENST00000409627	STAB1	Q9NY15	2570 aa		12.87	□□□□□ -0.35
SUMO1-208	ENST00000409627	MFSD2B	A6NFX1	497 aa		12.86	□□□□□ -0.35
SUMO1-208	ENST00000409627		L7N2F9	121 aa		12.86	□□□□□ -0.35
SUMO1-208	ENST00000409627	MT-CO2	P00403	227 aa		12.86	□□□□□ -0.35
SUMO1-208	ENST00000409627	GIP	P09681	153 aa	Predicted RBP	12.86	□□□□□ -0.35
SUMO1-208	ENST00000409627	PVALB	P20472	110 aa	Predicted RBP	12.86	□□□□□ -0.35
SUMO1-208	ENST00000409627	RAB11A	P62491	216 aa		12.86	□□□□□ -0.35
SUMO1-208	ENST00000409627	VAMP2	P63027	116 aa		12.86	□□□□□ -0.35
SUMO1-208	ENST00000409627	SPANXN5	Q5MJ07	72 aa		12.86	□□□□□ -0.35
SUMO1-208	ENST00000409627	C8orf86	Q6ZUL3	223 aa		12.86	□□□□□ -0.35
SUMO1-208	ENST00000409627	PPP1R1C	Q8WVI7	109 aa		12.86	□□□□□ -0.35
SUMO1-208	ENST00000409627	STRAP	Q9Y3F4	350 aa	Known RBP	12.86	□□□□□ -0.35
SUMO1-208	ENST00000409627	TRBV7-1	A0A0A6YYK4	115 aa		12.85	□□□□□ -0.35
SUMO1-208	ENST00000409627		H3BP45	60 aa		12.85	□□□□□ -0.35
SUMO1-208	ENST00000409627	DEDD	O75618	318 aa		12.85	□□□□□ -0.35
SUMO1-208	ENST00000409627	RLN2	P04090	185 aa		12.85	□□□□□ -0.35
SUMO1-208	ENST00000409627	OR8U8	P0C7N1	319 aa		12.85	□□□□□ -0.35
SUMO1-208	ENST00000409627	PET100	P0DJ07	73 aa		12.85	□□□□□ -0.35
SUMO1-208	ENST00000409627	LRRC37A5P	Q49AS3	106 aa		12.85	□□□□□ -0.35
SUMO1-208	ENST00000409627	ZNF502	Q8TBZ5	544 aa		12.85	□□□□□ -0.35
SUMO1-208	ENST00000409627	SCARB1	Q8WTV0	552 aa		12.85	□□□□□ -0.35
SUMO1-208	ENST00000409627	PINX1	Q96BK5	328 aa	Known RBP	12.85	□□□□□ -0.35
SUMO1-208	ENST00000409627	OR5B12	Q96R08	314 aa		12.85	□□□□□ -0.35
SUMO1-208	ENST00000409627	ATP6V0B	Q99437	205 aa		12.85	□□□□□ -0.35
SUMO1-208	ENST00000409627	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	12.84	□□□□□ -0.35
SUMO1-208	ENST00000409627	RPS10-NUDT3	A0A1W2PQS6	291 aa		12.84	□□□□□ -0.35
SUMO1-208	ENST00000409627		M0QZ24	198 aa		12.84	□□□□□ -0.35
SUMO1-208	ENST00000409627	MPC2	O95563	127 aa		12.84	□□□□□ -0.35
SUMO1-208	ENST00000409627	IFNA4	P05014	189 aa		12.84	□□□□□ -0.35
SUMO1-208	ENST00000409627	FCGR2B	P31994	310 aa	Predicted RBP	12.84	□□□□□ -0.35
SUMO1-208	ENST00000409627	OPRK1	P41145	380 aa		12.84	□□□□□ -0.35
SUMO1-208	ENST00000409627	TMEM14EP	Q6UXP3	125 aa		12.84	□□□□□ -0.35
SUMO1-208	ENST00000409627	OR4F17	Q8NGA8	305 aa		12.84	□□□□□ -0.35
SUMO1-208	ENST00000409627	CCDC140	Q96MF4	163 aa		12.84	□□□□□ -0.35
SUMO1-208	ENST00000409627	OR4F4	Q96R69	305 aa		12.84	□□□□□ -0.35
SUMO1-208	ENST00000409627	FNDC4	Q9H6D8	234 aa	Predicted RBP	12.84	□□□□□ -0.35
SUMO1-208	ENST00000409627	C21orf62	Q9NYP8	219 aa		12.84	□□□□□ -0.35
SUMO1-208	ENST00000409627		S4R3C0	116 aa		12.84	□□□□□ -0.35
SUMO1-208	ENST00000409627	IGHV3-21	A0A0B4J1V1	117 aa		12.83	□□□□□ -0.36
SUMO1-208	ENST00000409627		H0YIZ8	118 aa		12.83	□□□□□ -0.36
SUMO1-208	ENST00000409627	RAP2B	P61225	183 aa		12.83	□□□□□ -0.36
SUMO1-208	ENST00000409627	ETFRF1	Q6IPR1	90 aa		12.83	□□□□□ -0.36
SUMO1-208	ENST00000409627	ETV3L	Q6ZN32	361 aa		12.83	□□□□□ -0.36
SUMO1-208	ENST00000409627	RAX2	Q96IS3	184 aa		12.83	□□□□□ -0.36
SUMO1-208	ENST00000409627	TXN2	Q99757	166 aa		12.83	□□□□□ -0.36
SUMO1-208	ENST00000409627	LYRM2	Q9NU23	88 aa	Predicted RBP	12.83	□□□□□ -0.36
SUMO1-208	ENST00000409627	PEF1	Q9UBV8	284 aa	Known RBP	12.83	□□□□□ -0.36
SUMO1-208	ENST00000409627	PAIP2B	Q9ULR5	123 aa	Known RBP	12.83	□□□□□ -0.36
SUMO1-208	ENST00000409627	PRSS46	E5RG02	174 aa		12.82	□□□□□ -0.36
SUMO1-208	ENST00000409627		E5RGE8	158 aa		12.82	□□□□□ -0.36
SUMO1-208	ENST00000409627	IGHV3-23	P01764	117 aa		12.82	□□□□□ -0.36
SUMO1-208	ENST00000409627	HSPB1	P04792	205 aa	Known RBP	12.82	□□□□□ -0.36
SUMO1-208	ENST00000409627	SLC25A4	P12235	298 aa		12.82	□□□□□ -0.36
SUMO1-208	ENST00000409627	MYCNOS	P40205	109 aa		12.82	□□□□□ -0.36
SUMO1-208	ENST00000409627	MFAP4	P55083	255 aa		12.82	□□□□□ -0.36
SUMO1-208	ENST00000409627	CD69	Q07108	199 aa		12.82	□□□□□ -0.36
SUMO1-208	ENST00000409627	DEFB136	Q30KP8	78 aa		12.82	□□□□□ -0.36
SUMO1-208	ENST00000409627	PRSS54	Q6PEW0	395 aa		12.82	□□□□□ -0.36
SUMO1-208	ENST00000409627	OR11H1	Q8NG94	326 aa		12.82	□□□□□ -0.36
SUMO1-208	ENST00000409627	RANGRF	Q9HD47	186 aa	Predicted RBP	12.82	□□□□□ -0.36
SUMO1-208	ENST00000409627	GAR1	Q9NY12	217 aa	Known RBP	12.82	□□□□□ -0.36
SUMO1-208	ENST00000409627	OR5AC2	Q9NZP5	309 aa		12.82	□□□□□ -0.36

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