RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 RHOGP84095 191 aa9.27□□□□□ -0.93
SNX13-202ENST00000409604 SRSF2Q01130 221 aaKnown RBP9.27□□□□□ -0.93
SNX13-202ENST00000409604 GUSBP1Q15486 140 aa9.27□□□□□ -0.93
SNX13-202ENST00000409604 PDZD11Q5EBL8 140 aa9.27□□□□□ -0.93
SNX13-202ENST00000409604 NABP2Q9BQ15 211 aa9.27□□□□□ -0.93
SNX13-202ENST00000409604 RPRMQ9NS64 109 aa9.27□□□□□ -0.93
SNX13-202ENST00000409604 NAT1P18440 290 aa9.27□□□□□ -0.93
SNX13-202ENST00000409604 ZFP36P26651 326 aaKnown RBP9.27□□□□□ -0.93
SNX13-202ENST00000409604 ARL16Q0P5N6 197 aa9.27□□□□□ -0.93
SNX13-202ENST00000409604 LINC01356Q8N9X3 169 aa9.27□□□□□ -0.93
SNX13-202ENST00000409604 SAV1Q9H4B6 383 aaPredicted RBP9.27□□□□□ -0.93
SNX13-202ENST00000409604 SLC45A2Q9UMX9 530 aa9.27□□□□□ -0.93
SNX13-202ENST00000409604 DBX1A6NMT0 343 aa9.27□□□□□ -0.93
SNX13-202ENST00000409604 ATP6V1FQ16864 119 aa9.27□□□□□ -0.93
SNX13-202ENST00000409604 CYB5R2Q6BCY4 276 aa9.27□□□□□ -0.93
SNX13-202ENST00000409604 HIST2H2BDQ6DRA6 164 aa9.27□□□□□ -0.93
SNX13-202ENST00000409604 ISOC2Q96AB3 205 aa9.27□□□□□ -0.93
SNX13-202ENST00000409604 MBNL3Q9NUK0 354 aaKnown RBP9.27□□□□□ -0.93
SNX13-202ENST00000409604 PF4P02776 101 aa9.26□□□□□ -0.93
SNX13-202ENST00000409604 IGHV4-38-2P0DP08 117 aa9.26□□□□□ -0.93
SNX13-202ENST00000409604 TMEM95Q3KNT9 176 aa9.26□□□□□ -0.93
SNX13-202ENST00000409604 FAM120AOSQ5T036 256 aa9.26□□□□□ -0.93
SNX13-202ENST00000409604 SLC25A48Q6ZT89 311 aaKnown RBP9.26□□□□□ -0.93
SNX13-202ENST00000409604 TEX50A0A1B0GTY4 177 aa9.26□□□□□ -0.93
SNX13-202ENST00000409604 H0YJW9 148 aa9.26□□□□□ -0.93
SNX13-202ENST00000409604 B3GALNT1O75752 331 aa9.26□□□□□ -0.93
SNX13-202ENST00000409604 WFDC11Q8NEX6 87 aa9.26□□□□□ -0.93
SNX13-202ENST00000409604 CACFD1Q9UGQ2 172 aa9.26□□□□□ -0.93
SNX13-202ENST00000409604 DUXBA0A1W2PPF3 345 aa9.26□□□□□ -0.93
SNX13-202ENST00000409604 CNN1P51911 297 aaKnown RBP9.26□□□□□ -0.93
SNX13-202ENST00000409604 ZNF585BQ52M93 769 aa9.26□□□□□ -0.93
SNX13-202ENST00000409604 ZNF429Q86V71 674 aa9.26□□□□□ -0.93
SNX13-202ENST00000409604 STPG3Q8N7X2 389 aa9.26□□□□□ -0.93
SNX13-202ENST00000409604 OR51G1Q8NGK1 321 aa9.26□□□□□ -0.93
SNX13-202ENST00000409604 OR5B3Q8NH48 314 aa9.26□□□□□ -0.93
SNX13-202ENST00000409604 TECRQ9NZ01 308 aaKnown RBP9.26□□□□□ -0.93
SNX13-202ENST00000409604 HIGD1AQ9Y241 93 aa9.26□□□□□ -0.93
SNX13-202ENST00000409604 MGAM2Q2M2H8 2515 aa9.26□□□□□ -0.93
SNX13-202ENST00000409604 ITPR3Q14573 2671 aa9.25□□□□□ -0.93
SNX13-202ENST00000409604 DCHS1Q96JQ0 3298 aa9.25□□□□□ -0.93
SNX13-202ENST00000409604 KALRNO60229 2985 aa9.25□□□□□ -0.93
SNX13-202ENST00000409604 RNF224P0DH78 156 aa9.25□□□□□ -0.93
SNX13-202ENST00000409604 RARRES2Q99969 163 aa9.25□□□□□ -0.93
SNX13-202ENST00000409604 C21orf62Q9NYP8 219 aa9.25□□□□□ -0.93
SNX13-202ENST00000409604 SOX21Q9Y651 276 aaPredicted RBP9.25□□□□□ -0.93
SNX13-202ENST00000409604 TSPAN9O75954 239 aa9.25□□□□□ -0.93
SNX13-202ENST00000409604 MDKP21741 143 aaPredicted RBP9.25□□□□□ -0.93
SNX13-202ENST00000409604 LMO1P25800 156 aa9.25□□□□□ -0.93
SNX13-202ENST00000409604 ZNF90Q03938 601 aa9.25□□□□□ -0.93
SNX13-202ENST00000409604 C15orf54Q8N8G6 183 aa9.25□□□□□ -0.93
SNX13-202ENST00000409604 PAXXQ9BUH6 204 aa9.25□□□□□ -0.93
SNX13-202ENST00000409604 RNF222A6NCQ9 220 aa9.25□□□□□ -0.93
SNX13-202ENST00000409604 S100A7P31151 101 aa9.25□□□□□ -0.93
SNX13-202ENST00000409604 CAMPP49913 170 aa9.25□□□□□ -0.93
SNX13-202ENST00000409604 ZNF880Q6PDB4 577 aa9.25□□□□□ -0.93
SNX13-202ENST00000409604 C2CD4CQ8TF44 421 aa9.25□□□□□ -0.93
SNX13-202ENST00000409604 NPFFR1Q9GZQ6 430 aa9.25□□□□□ -0.93
SNX13-202ENST00000409604 TMEM56-RWDD3S4R434 201 aa9.25□□□□□ -0.93
SNX13-202ENST00000409604 PGPA6NDG6 321 aa9.24□□□□□ -0.93
SNX13-202ENST00000409604 RBFOX3A6NFN3 312 aa9.24□□□□□ -0.93
SNX13-202ENST00000409604 AANATQ16613 207 aa9.24□□□□□ -0.93
SNX13-202ENST00000409604 DEFB113Q30KQ7 82 aa9.24□□□□□ -0.93
SNX13-202ENST00000409604 TCTEX1D1Q8N7M0 179 aa9.24□□□□□ -0.93
SNX13-202ENST00000409604 GLMPQ8WWB7 406 aa9.24□□□□□ -0.93
SNX13-202ENST00000409604 GRAMD2BQ96HH9 432 aa9.24□□□□□ -0.93
SNX13-202ENST00000409604 WDFY3Q8IZQ1 3526 aa9.24□□□□□ -0.93
SNX13-202ENST00000409604 A0A1W2PPR1 153 aa9.24□□□□□ -0.93
SNX13-202ENST00000409604 C15orf61A6NNL5 157 aa9.24□□□□□ -0.93
SNX13-202ENST00000409604 MT-ND4LP03901 98 aa9.24□□□□□ -0.93
SNX13-202ENST00000409604 RBPMS2Q6ZRY4 209 aaKnown RBP9.24□□□□□ -0.93
SNX13-202ENST00000409604 C16orf92Q96LL3 132 aa9.24□□□□□ -0.93
SNX13-202ENST00000409604 PITX3O75364 302 aa9.24□□□□□ -0.93
SNX13-202ENST00000409604 SLC25A16P16260 332 aa9.24□□□□□ -0.93
SNX13-202ENST00000409604 RAB5CP51148 216 aa9.24□□□□□ -0.93
SNX13-202ENST00000409604 NDPQ00604 133 aa9.24□□□□□ -0.93
SNX13-202ENST00000409604 MST1LQ2TV78 715 aa9.24□□□□□ -0.93
SNX13-202ENST00000409604 C18orf12Q96KH6 178 aa9.24□□□□□ -0.93
SNX13-202ENST00000409604 TRAV34A0A0B4J273 112 aa9.24□□□□□ -0.93
SNX13-202ENST00000409604 MUC21A0A0G2JKD1 596 aa9.24□□□□□ -0.93
SNX13-202ENST00000409604 MUC21A0A140T8X8 626 aa9.24□□□□□ -0.93
SNX13-202ENST00000409604 ARL14EPLP0DKL9 152 aa9.24□□□□□ -0.93
SNX13-202ENST00000409604 CFHR2P36980 270 aa9.24□□□□□ -0.93
SNX13-202ENST00000409604 RPL35P42766 123 aaKnown RBP9.24□□□□□ -0.93
SNX13-202ENST00000409604 RND3P61587 244 aa9.24□□□□□ -0.93
SNX13-202ENST00000409604 MUC21Q5SSG8 566 aa9.24□□□□□ -0.93
SNX13-202ENST00000409604 PRNTQ86SH4 94 aa9.24□□□□□ -0.93
SNX13-202ENST00000409604 DUX3Q96PT4 197 aa9.24□□□□□ -0.93
SNX13-202ENST00000409604 NDFIP1Q9BT67 221 aa9.24□□□□□ -0.93
SNX13-202ENST00000409604 FLNAP21333 2647 aaKnown RBP9.23□□□□□ -0.93
SNX13-202ENST00000409604 IGHV2-70DA0A0C4DH43 119 aa9.23□□□□□ -0.93
SNX13-202ENST00000409604 SRRM4A7MD48 611 aaKnown RBP9.23□□□□□ -0.93
SNX13-202ENST00000409604 C15orf65H3BRN8 121 aa9.23□□□□□ -0.93
SNX13-202ENST00000409604 IGHV2-70P01814 119 aa9.23□□□□□ -0.93
SNX13-202ENST00000409604 IGHV4-59P01825 116 aa9.23□□□□□ -0.93
SNX13-202ENST00000409604 DANCRP0C864 163 aa9.23□□□□□ -0.93
SNX13-202ENST00000409604 MMP9P14780 707 aa9.23□□□□□ -0.93
SNX13-202ENST00000409604 ARL3P36405 182 aa9.23□□□□□ -0.93
SNX13-202ENST00000409604 CD81P60033 236 aa9.23□□□□□ -0.93
SNX13-202ENST00000409604 PRSS8Q16651 343 aa9.23□□□□□ -0.93
SNX13-202ENST00000409604 LRRC75BQ2VPJ9 315 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms