RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 JKAMPQ9P055 326 aa8.8□□□□□ -1
NIF3L1-204ENST00000409357 ERRFI1Q9UJM3 462 aaPredicted RBP8.8□□□□□ -1
NIF3L1-204ENST00000409357 ESPL1Q14674 2120 aa8.8□□□□□ -1
NIF3L1-204ENST00000409357 EXPH5Q8NEV8 1989 aa8.8□□□□□ -1
NIF3L1-204ENST00000409357 DOPEY1Q5JWR5 2465 aa8.8□□□□□ -1
NIF3L1-204ENST00000409357 DOCK11Q5JSL3 2073 aa8.79□□□□□ -1
NIF3L1-204ENST00000409357 FAM231BA6NCW3 169 aa8.79□□□□□ -1
NIF3L1-204ENST00000409357 FAM90A9PA6NNJ1 464 aa8.79□□□□□ -1
NIF3L1-204ENST00000409357 OR9G9P0C7N8 305 aa8.79□□□□□ -1
NIF3L1-204ENST00000409357 FRMD6-AS1P0C7T7 363 aa8.79□□□□□ -1
NIF3L1-204ENST00000409357 ARL14EPLP0DKL9 152 aa8.79□□□□□ -1
NIF3L1-204ENST00000409357 COX6A1P12074 109 aa8.79□□□□□ -1
NIF3L1-204ENST00000409357 UQCRFS1P47985 274 aa8.79□□□□□ -1
NIF3L1-204ENST00000409357 GNG4P50150 75 aa8.79□□□□□ -1
NIF3L1-204ENST00000409357 TIGITQ495A1 244 aa8.79□□□□□ -1
NIF3L1-204ENST00000409357 CD300EQ496F6 205 aaPredicted RBP8.79□□□□□ -1
NIF3L1-204ENST00000409357 TMEM97Q5BJF2 176 aa8.79□□□□□ -1
NIF3L1-204ENST00000409357 FAM120AOSQ5T036 256 aa8.79□□□□□ -1
NIF3L1-204ENST00000409357 MKXQ8IYA7 352 aa8.79□□□□□ -1
NIF3L1-204ENST00000409357 ZNF645Q8N7E2 425 aa8.79□□□□□ -1
NIF3L1-204ENST00000409357 ZNF611Q8N823 705 aa8.79□□□□□ -1
NIF3L1-204ENST00000409357 NHLRC2Q8NBF2 726 aa8.79□□□□□ -1
NIF3L1-204ENST00000409357 OR2K2Q8NGT1 345 aa8.79□□□□□ -1
NIF3L1-204ENST00000409357 OR1F12Q8NHA8 337 aa8.79□□□□□ -1
NIF3L1-204ENST00000409357 WFDC12Q8WWY7 111 aa8.79□□□□□ -1
NIF3L1-204ENST00000409357 AP1S3Q96PC3 154 aa8.79□□□□□ -1
NIF3L1-204ENST00000409357 SPATA25Q9BR10 227 aa8.79□□□□□ -1
NIF3L1-204ENST00000409357 PGPEP1Q9NXJ5 209 aa8.79□□□□□ -1
NIF3L1-204ENST00000409357 UNC79Q9P2D8 2635 aa8.79□□□□□ -1
NIF3L1-204ENST00000409357 IGHV3-20A0A0C4DH32 117 aa8.78□□□□□ -1
NIF3L1-204ENST00000409357 A0A0G2JMM0 328 aa8.78□□□□□ -1
NIF3L1-204ENST00000409357 A0A1W2PPB8 328 aa8.78□□□□□ -1
NIF3L1-204ENST00000409357 KIR3DP1A8MWS1 328 aa8.78□□□□□ -1
NIF3L1-204ENST00000409357 J3QR89 54 aa8.78□□□□□ -1
NIF3L1-204ENST00000409357 ZIC3O60481 467 aa8.78□□□□□ -1
NIF3L1-204ENST00000409357 HBZP02008 142 aa8.78□□□□□ -1
NIF3L1-204ENST00000409357 USF1P22415 310 aaPredicted RBP8.78□□□□□ -1
NIF3L1-204ENST00000409357 MLF1P58340 268 aa8.78□□□□□ -1
NIF3L1-204ENST00000409357 HSD52Q0P140 79 aa8.78□□□□□ -1
NIF3L1-204ENST00000409357 IZUMO4Q1ZYL8 232 aa8.78□□□□□ -1
NIF3L1-204ENST00000409357 PDLIM3Q53GG5 364 aaPredicted RBP8.78□□□□□ -1
NIF3L1-204ENST00000409357 VSTM2AQ8TAG5 236 aa8.78□□□□□ -1
NIF3L1-204ENST00000409357 FER1L6-AS2Q96M78 137 aa8.78□□□□□ -1
NIF3L1-204ENST00000409357 GPHA2Q96T91 129 aa8.78□□□□□ -1
NIF3L1-204ENST00000409357 TMEM167BQ9NRX6 74 aa8.78□□□□□ -1
NIF3L1-204ENST00000409357 C19orf25Q9UFG5 118 aaPredicted RBP8.78□□□□□ -1
NIF3L1-204ENST00000409357 YTHDF2Q9Y5A9 579 aaKnown RBP8.78□□□□□ -1
NIF3L1-204ENST00000409357 POLEQ07864 2286 aa8.78□□□□□ -1
NIF3L1-204ENST00000409357 ICE1Q9Y2F5 2266 aa8.78□□□□□ -1
NIF3L1-204ENST00000409357 HELTA6NFD8 242 aa8.78□□□□□ -1
NIF3L1-204ENST00000409357 FNDC10F2Z333 226 aa8.78□□□□□ -1
NIF3L1-204ENST00000409357 SMPD2O60906 423 aa8.78□□□□□ -1
NIF3L1-204ENST00000409357 CLDN14O95500 239 aa8.78□□□□□ -1
NIF3L1-204ENST00000409357 AZU1P20160 251 aa8.78□□□□□ -1
NIF3L1-204ENST00000409357 SRSF1Q07955 248 aaKnown RBP eCLIP8.78□□□□□ -17e-6■□□□□ 10.7
NIF3L1-204ENST00000409357 C5orf64Q2M2E5 130 aa8.78□□□□□ -1
NIF3L1-204ENST00000409357 SPATA46Q5T0L3 261 aa8.78□□□□□ -1
NIF3L1-204ENST00000409357 CARD17Q5XLA6 110 aa8.78□□□□□ -1
NIF3L1-204ENST00000409357 FA2HQ7L5A8 372 aa8.78□□□□□ -1
NIF3L1-204ENST00000409357 TECRQ9NZ01 308 aaKnown RBP8.78□□□□□ -1
NIF3L1-204ENST00000409357 SOX21Q9Y651 276 aaPredicted RBP8.78□□□□□ -1
NIF3L1-204ENST00000409357 IGHV1-45A0A0A0MS14 117 aa8.77□□□□□ -1.01
NIF3L1-204ENST00000409357 H3BML4 177 aa8.77□□□□□ -1.01
NIF3L1-204ENST00000409357 LIPFP07098 398 aa8.77□□□□□ -1.01
NIF3L1-204ENST00000409357 GATA2P23769 480 aaPredicted RBP8.77□□□□□ -1.01
NIF3L1-204ENST00000409357 MC5RP33032 325 aa8.77□□□□□ -1.01
NIF3L1-204ENST00000409357 PPOXP50336 477 aa8.77□□□□□ -1.01
NIF3L1-204ENST00000409357 PLP1P60201 277 aa8.77□□□□□ -1.01
NIF3L1-204ENST00000409357 EIF4EBP1Q13541 118 aaPredicted RBP8.77□□□□□ -1.01
NIF3L1-204ENST00000409357 PCOLCEQ15113 449 aa8.77□□□□□ -1.01
NIF3L1-204ENST00000409357 KIAA1644Q3SXP7 199 aa8.77□□□□□ -1.01
NIF3L1-204ENST00000409357 PSMG4Q5JS54 123 aa8.77□□□□□ -1.01
NIF3L1-204ENST00000409357 COLCA1Q6ZS62 124 aa8.77□□□□□ -1.01
NIF3L1-204ENST00000409357 C2orf91Q6ZV80 131 aa8.77□□□□□ -1.01
NIF3L1-204ENST00000409357 WFDC8Q8IUA0 241 aa8.77□□□□□ -1.01
NIF3L1-204ENST00000409357 CELSR2Q9HCU4 2923 aa8.77□□□□□ -1.01
NIF3L1-204ENST00000409357 TEX15Q9BXT5 2789 aa8.76□□□□□ -1.01
NIF3L1-204ENST00000409357 ZGRF1Q86YA3 2104 aa8.76□□□□□ -1.01
NIF3L1-204ENST00000409357 TRAV38-1A0A0B4J264 116 aa8.76□□□□□ -1.01
NIF3L1-204ENST00000409357 C15orf62A8K5M9 175 aa8.76□□□□□ -1.01
NIF3L1-204ENST00000409357 F2RL2O00254 374 aa8.76□□□□□ -1.01
NIF3L1-204ENST00000409357 SLAQ13239 276 aa8.76□□□□□ -1.01
NIF3L1-204ENST00000409357 CENPWQ5EE01 88 aa8.76□□□□□ -1.01
NIF3L1-204ENST00000409357 IGFL3Q6UXB1 125 aa8.76□□□□□ -1.01
NIF3L1-204ENST00000409357 LINC00696Q6ZRV3 163 aa8.76□□□□□ -1.01
NIF3L1-204ENST00000409357 LCNL1Q6ZST4 164 aa8.76□□□□□ -1.01
NIF3L1-204ENST00000409357 BPIFA4PQ86YQ2 179 aa8.76□□□□□ -1.01
NIF3L1-204ENST00000409357 OR52E5Q8NH55 327 aa8.76□□□□□ -1.01
NIF3L1-204ENST00000409357 FAM222BQ8WU58 562 aa8.76□□□□□ -1.01
NIF3L1-204ENST00000409357 H1FXQ92522 213 aaKnown RBP8.76□□□□□ -1.01
NIF3L1-204ENST00000409357 TAAR6Q96RI8 345 aa8.76□□□□□ -1.01
NIF3L1-204ENST00000409357 PRDM14Q9GZV8 571 aa8.76□□□□□ -1.01
NIF3L1-204ENST00000409357 ZFAND3Q9H8U3 227 aa8.76□□□□□ -1.01
NIF3L1-204ENST00000409357 SIGLEC8Q9NYZ4 499 aa8.76□□□□□ -1.01
NIF3L1-204ENST00000409357 ITPR2Q14571 2701 aa8.76□□□□□ -1.01
NIF3L1-204ENST00000409357 DIDO1Q9BTC0 2240 aaKnown RBP8.75□□□□□ -1.01
NIF3L1-204ENST00000409357 LOC102723996A0A087X1L8 192 aa8.75□□□□□ -1.01
NIF3L1-204ENST00000409357 J3QW42 95 aa8.75□□□□□ -1.01
NIF3L1-204ENST00000409357 IGLV2-8P01709 118 aa8.75□□□□□ -1.01
NIF3L1-204ENST00000409357 HTR1DP28221 377 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms