RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 BSXQ3C1V8 233 aa15.59■□□□□ 0.09
PTCD3-202ENST00000409326 ZNF502Q8TBZ5 544 aa15.59■□□□□ 0.09
PTCD3-202ENST00000409326 K7EIM0 57 aa15.58■□□□□ 0.08
PTCD3-202ENST00000409326 OVOL1O14753 267 aa15.58■□□□□ 0.08
PTCD3-202ENST00000409326 SUB1P53999 127 aaKnown RBP eCLIP15.58■□□□□ 0.08
PTCD3-202ENST00000409326 RPEL1Q2QD12 228 aa15.58■□□□□ 0.08
PTCD3-202ENST00000409326 PVRIGQ6DKI7 326 aa15.58■□□□□ 0.08
PTCD3-202ENST00000409326 CLEC19AQ6UXS0 136 aa15.58■□□□□ 0.08
PTCD3-202ENST00000409326 ZNF431Q8TF32 576 aaPredicted RBP15.58■□□□□ 0.08
PTCD3-202ENST00000409326 MISP3Q96FF7 219 aa15.58■□□□□ 0.08
PTCD3-202ENST00000409326 SEC22CQ9BRL7 303 aa15.58■□□□□ 0.08
PTCD3-202ENST00000409326 GPR61Q9BZJ8 451 aa15.58■□□□□ 0.08
PTCD3-202ENST00000409326 HEYLQ9NQ87 328 aaPredicted RBP15.58■□□□□ 0.08
PTCD3-202ENST00000409326 FAM90A26D6RGX4 464 aa15.57■□□□□ 0.08
PTCD3-202ENST00000409326 PPP5D1E7EU14 171 aa15.57■□□□□ 0.08
PTCD3-202ENST00000409326 IFNA21P01568 189 aa15.57■□□□□ 0.08
PTCD3-202ENST00000409326 HTR2BP41595 481 aa15.57■□□□□ 0.08
PTCD3-202ENST00000409326 C1QL4Q86Z23 238 aa15.57■□□□□ 0.08
PTCD3-202ENST00000409326 SCARB1Q8WTV0 552 aa15.57■□□□□ 0.08
PTCD3-202ENST00000409326 ATP6V0BQ99437 205 aa15.57■□□□□ 0.08
PTCD3-202ENST00000409326 HIPK2Q9H2X6 1198 aa15.57■□□□□ 0.08
PTCD3-202ENST00000409326 RBKSQ9H477 322 aa15.57■□□□□ 0.08
PTCD3-202ENST00000409326 IGHV3-21A0A0B4J1V1 117 aa15.56■□□□□ 0.08
PTCD3-202ENST00000409326 I3L2K1 104 aa15.56■□□□□ 0.08
PTCD3-202ENST00000409326 CORTO00230 105 aa15.56■□□□□ 0.08
PTCD3-202ENST00000409326 GGCTO75223 188 aaKnown RBP15.56■□□□□ 0.08
PTCD3-202ENST00000409326 IL5P05113 134 aa15.56■□□□□ 0.08
PTCD3-202ENST00000409326 ARL3P36405 182 aa15.56■□□□□ 0.08
PTCD3-202ENST00000409326 KLF5Q13887 457 aaPredicted RBP15.56■□□□□ 0.08
PTCD3-202ENST00000409326 KPRPQ5T749 579 aaPredicted RBP15.56■□□□□ 0.08
PTCD3-202ENST00000409326 PLET1Q6UQ28 207 aa15.56■□□□□ 0.08
PTCD3-202ENST00000409326 SLC24A4Q8NFF2 622 aa15.56■□□□□ 0.08
PTCD3-202ENST00000409326 DTD1Q8TEA8 209 aa15.56■□□□□ 0.08
PTCD3-202ENST00000409326 C21orf62Q9NYP8 219 aa15.56■□□□□ 0.08
PTCD3-202ENST00000409326 DNAH3Q8TD57 4116 aa15.56■□□□□ 0.08
PTCD3-202ENST00000409326 MPTX1A8MV57 137 aa15.55■□□□□ 0.08
PTCD3-202ENST00000409326 SEC14L6B5MCN3 397 aa15.55■□□□□ 0.08
PTCD3-202ENST00000409326 MT-CO2P00403 227 aa15.55■□□□□ 0.08
PTCD3-202ENST00000409326 CLEC3BP05452 202 aa15.55■□□□□ 0.08
PTCD3-202ENST00000409326 GPR183P32249 361 aa15.55■□□□□ 0.08
PTCD3-202ENST00000409326 BEAN1Q3B7T3 259 aa15.55■□□□□ 0.08
PTCD3-202ENST00000409326 C9orf66Q5T8R8 295 aa15.55■□□□□ 0.08
PTCD3-202ENST00000409326 PINX1Q96BK5 328 aaKnown RBP15.55■□□□□ 0.08
PTCD3-202ENST00000409326 WIPF1O43516 503 aa15.54■□□□□ 0.08
PTCD3-202ENST00000409326 SYNJ2BPP57105 145 aa15.54■□□□□ 0.08
PTCD3-202ENST00000409326 C2orf83Q53S99 150 aa15.54■□□□□ 0.08
PTCD3-202ENST00000409326 C11orf87Q6NUJ2 197 aa15.54■□□□□ 0.08
PTCD3-202ENST00000409326 MARVELD1Q9BSK0 173 aa15.54■□□□□ 0.08
PTCD3-202ENST00000409326 F8W735 103 aaPredicted RBP15.53■□□□□ 0.08
PTCD3-202ENST00000409326 INMT-MINDY4F8WBC2 141 aa15.53■□□□□ 0.08
PTCD3-202ENST00000409326 MED6O75586 246 aa15.53■□□□□ 0.08
PTCD3-202ENST00000409326 NPY1RP25929 384 aa15.53■□□□□ 0.08
PTCD3-202ENST00000409326 FCGR2BP31994 310 aaPredicted RBP15.53■□□□□ 0.08
PTCD3-202ENST00000409326 TATDN3Q17R31 274 aa15.53■□□□□ 0.08
PTCD3-202ENST00000409326 ACSM6Q6P461 480 aa15.53■□□□□ 0.08
PTCD3-202ENST00000409326 C12orf45Q8N5I9 185 aaPredicted RBP15.53■□□□□ 0.08
PTCD3-202ENST00000409326 OR4D5Q8NGN0 318 aa15.53■□□□□ 0.08
PTCD3-202ENST00000409326 BSCL2Q96G97 398 aaPredicted RBP15.53■□□□□ 0.08
PTCD3-202ENST00000409326 PALMDQ9NP74 551 aa15.53■□□□□ 0.08
PTCD3-202ENST00000409326 U3KQ87 197 aa15.53■□□□□ 0.08
PTCD3-202ENST00000409326 OR2T8A6NH00 312 aa15.52■□□□□ 0.08
PTCD3-202ENST00000409326 TGOLN2O43493 480 aa15.52■□□□□ 0.08
PTCD3-202ENST00000409326 PRAF2O60831 178 aa15.52■□□□□ 0.08
PTCD3-202ENST00000409326 OR2C1O95371 312 aa15.52■□□□□ 0.08
PTCD3-202ENST00000409326 INSL3P51460 131 aa15.52■□□□□ 0.08
PTCD3-202ENST00000409326 MFAP4P55083 255 aa15.52■□□□□ 0.08
PTCD3-202ENST00000409326 Q56UQ5 140 aa15.52■□□□□ 0.08
PTCD3-202ENST00000409326 NOXA1Q86UR1 476 aa15.52■□□□□ 0.08
PTCD3-202ENST00000409326 OR9G4Q8NGQ1 327 aa15.52■□□□□ 0.08
PTCD3-202ENST00000409326 TMEM170AQ8WVE7 144 aa15.52■□□□□ 0.08
PTCD3-202ENST00000409326 OR10C1Q96KK4 312 aa15.52■□□□□ 0.08
PTCD3-202ENST00000409326 TXN2Q99757 166 aa15.52■□□□□ 0.08
PTCD3-202ENST00000409326 GPN1Q9HCN4 374 aaPredicted RBP15.52■□□□□ 0.08
PTCD3-202ENST00000409326 ZC4H2Q9NQZ6 224 aa15.52■□□□□ 0.08
PTCD3-202ENST00000409326 GAR1Q9NY12 217 aaKnown RBP15.52■□□□□ 0.08
PTCD3-202ENST00000409326 SYNGR2O43760 224 aa15.51■□□□□ 0.07
PTCD3-202ENST00000409326 OPRK1P41145 380 aa15.51■□□□□ 0.07
PTCD3-202ENST00000409326 ID3Q02535 119 aa15.51■□□□□ 0.07
PTCD3-202ENST00000409326 IAH1Q2TAA2 248 aaPredicted RBP15.51■□□□□ 0.07
PTCD3-202ENST00000409326 SPSB3Q6PJ21 355 aa15.51■□□□□ 0.07
PTCD3-202ENST00000409326 GPHB5Q86YW7 130 aa15.51■□□□□ 0.07
PTCD3-202ENST00000409326 UBAC2Q8NBM4 344 aa15.51■□□□□ 0.07
PTCD3-202ENST00000409326 UXS1Q8NBZ7 420 aa15.51■□□□□ 0.07
PTCD3-202ENST00000409326 RNASEH2CQ8TDP1 164 aaKnown RBP15.51■□□□□ 0.07
PTCD3-202ENST00000409326 ELOVL1Q9BW60 279 aa15.51■□□□□ 0.07
PTCD3-202ENST00000409326 CCSO14618 274 aa15.5■□□□□ 0.07
PTCD3-202ENST00000409326 SAP30O75446 220 aa15.5■□□□□ 0.07
PTCD3-202ENST00000409326 PTTG1O95997 202 aa15.5■□□□□ 0.07
PTCD3-202ENST00000409326 IFNA10P01566 189 aa15.5■□□□□ 0.07
PTCD3-202ENST00000409326 IGHV3-48P01763 117 aa15.5■□□□□ 0.07
PTCD3-202ENST00000409326 IAPPP10997 89 aa15.5■□□□□ 0.07
PTCD3-202ENST00000409326 NKX2-1P43699 371 aaPredicted RBP15.5■□□□□ 0.07
PTCD3-202ENST00000409326 ATP5IP56385 69 aaPredicted RBP15.5■□□□□ 0.07
PTCD3-202ENST00000409326 EGFEM1PQ0D2K5 195 aa15.5■□□□□ 0.07
PTCD3-202ENST00000409326 REC114Q7Z4M0 266 aa15.5■□□□□ 0.07
PTCD3-202ENST00000409326 ZBTB8BQ8NAP8 495 aaPredicted RBP15.5■□□□□ 0.07
PTCD3-202ENST00000409326 CIB3Q96Q77 187 aaPredicted RBP15.5■□□□□ 0.07
PTCD3-202ENST00000409326 MAGT1Q9H0U3 335 aa15.5■□□□□ 0.07
PTCD3-202ENST00000409326 FNDC4Q9H6D8 234 aaPredicted RBP15.5■□□□□ 0.07
PTCD3-202ENST00000409326 SNRPGP15A8MWD9 76 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms