RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 NHP2Q9NX24 153 aaKnown RBP10.33□□□□□ -0.76
SHANK2-203ENST00000409161 TMEM42Q69YG0 159 aa10.32□□□□□ -0.76
SHANK2-203ENST00000409161 DCTN5Q9BTE1 182 aa10.32□□□□□ -0.76
SHANK2-203ENST00000409161 FNDC4Q9H6D8 234 aaPredicted RBP10.32□□□□□ -0.76
SHANK2-203ENST00000409161 IGLV1-36A0A0B4J1U3 117 aa10.32□□□□□ -0.76
SHANK2-203ENST00000409161 SCARF2Q96GP6 870 aaPredicted RBP10.32□□□□□ -0.76
SHANK2-203ENST00000409161 GREB1LQ9C091 1923 aaPredicted RBP10.32□□□□□ -0.76
SHANK2-203ENST00000409161 OR52E5Q8NH55 327 aa10.32□□□□□ -0.76
SHANK2-203ENST00000409161 IL11P20809 199 aa10.32□□□□□ -0.76
SHANK2-203ENST00000409161 FOXA3P55318 350 aaPredicted RBP10.32□□□□□ -0.76
SHANK2-203ENST00000409161 OSTCQ9NRP0 149 aa10.32□□□□□ -0.76
SHANK2-203ENST00000409161 SERF1AO75920 110 aa10.32□□□□□ -0.76
SHANK2-203ENST00000409161 DRAM1Q8N682 238 aa10.32□□□□□ -0.76
SHANK2-203ENST00000409161 RNF115Q9Y4L5 304 aa10.32□□□□□ -0.76
SHANK2-203ENST00000409161 UCP1P25874 307 aa10.32□□□□□ -0.76
SHANK2-203ENST00000409161 CCL20P78556 96 aa10.32□□□□□ -0.76
SHANK2-203ENST00000409161 CD69Q07108 199 aa10.32□□□□□ -0.76
SHANK2-203ENST00000409161 SLC50A1Q9BRV3 221 aa10.32□□□□□ -0.76
SHANK2-203ENST00000409161 IGKV3OR2-268A0A0C4DH90 116 aa10.32□□□□□ -0.76
SHANK2-203ENST00000409161 TMEM14DPA8MWL7 114 aa10.32□□□□□ -0.76
SHANK2-203ENST00000409161 NR2C2APQ86WQ0 139 aa10.32□□□□□ -0.76
SHANK2-203ENST00000409161 DUX3Q96PT4 197 aa10.32□□□□□ -0.76
SHANK2-203ENST00000409161 ZNF703Q9H7S9 590 aaPredicted RBP10.32□□□□□ -0.76
SHANK2-203ENST00000409161 DLX4Q92988 240 aaPredicted RBP10.31□□□□□ -0.76
SHANK2-203ENST00000409161 ZNF71Q9NQZ8 489 aaPredicted RBP10.31□□□□□ -0.76
SHANK2-203ENST00000409161 HS3ST3B1Q9Y662 390 aa10.31□□□□□ -0.76
SHANK2-203ENST00000409161 B9A039 149 aa10.31□□□□□ -0.76
SHANK2-203ENST00000409161 TDGF1P13385 188 aa10.31□□□□□ -0.76
SHANK2-203ENST00000409161 TMEM249Q2WGJ8 235 aa10.31□□□□□ -0.76
SHANK2-203ENST00000409161 ASPHD2Q6ICH7 369 aa10.31□□□□□ -0.76
SHANK2-203ENST00000409161 ITLN1Q8WWA0 313 aa10.31□□□□□ -0.76
SHANK2-203ENST00000409161 LOXL4Q96JB6 756 aa10.31□□□□□ -0.76
SHANK2-203ENST00000409161 IFI27L2Q9H2X8 130 aa10.31□□□□□ -0.76
SHANK2-203ENST00000409161 WISP3O95389 354 aaPredicted RBP10.31□□□□□ -0.76
SHANK2-203ENST00000409161 IGKCP01834 107 aa10.31□□□□□ -0.76
SHANK2-203ENST00000409161 RFLNBQ8N5W9 214 aa10.31□□□□□ -0.76
SHANK2-203ENST00000409161 OR5P3Q8WZ94 311 aa10.31□□□□□ -0.76
SHANK2-203ENST00000409161 NPIPB3Q92617 1050 aa10.31□□□□□ -0.76
SHANK2-203ENST00000409161 IGHV1-45A0A0A0MS14 117 aa10.31□□□□□ -0.76
SHANK2-203ENST00000409161 DEFB124Q8NES8 71 aa10.31□□□□□ -0.76
SHANK2-203ENST00000409161 FOXD3Q9UJU5 478 aaPredicted RBP10.31□□□□□ -0.76
SHANK2-203ENST00000409161 REG1AP05451 166 aa10.31□□□□□ -0.76
SHANK2-203ENST00000409161 Q9H3A6 140 aa10.31□□□□□ -0.76
SHANK2-203ENST00000409161 CGAP01215 116 aa10.31□□□□□ -0.76
SHANK2-203ENST00000409161 KLF14Q8TD94 323 aaPredicted RBP10.31□□□□□ -0.76
SHANK2-203ENST00000409161 SCO2A0A1W2PP80 73 aa10.31□□□□□ -0.76
SHANK2-203ENST00000409161 CDK2AP2O75956 126 aa10.31□□□□□ -0.76
SHANK2-203ENST00000409161 ZNF479Q96JC4 524 aa10.31□□□□□ -0.76
SHANK2-203ENST00000409161 DNAJC30Q96LL9 226 aa10.31□□□□□ -0.76
SHANK2-203ENST00000409161 MED13LQ71F56 2210 aa10.3□□□□□ -0.76
SHANK2-203ENST00000409161 C3AR1Q16581 482 aa10.3□□□□□ -0.76
SHANK2-203ENST00000409161 FRMPD3Q5JV73 1810 aa10.3□□□□□ -0.76
SHANK2-203ENST00000409161 HIST1H2BKO60814 126 aa10.3□□□□□ -0.76
SHANK2-203ENST00000409161 HIST1H2BJP06899 126 aa10.3□□□□□ -0.76
SHANK2-203ENST00000409161 HIST1H2BOP23527 126 aa10.3□□□□□ -0.76
SHANK2-203ENST00000409161 HIST1H2BBP33778 126 aa10.3□□□□□ -0.76
SHANK2-203ENST00000409161 HIST1H2BDP58876 126 aa10.3□□□□□ -0.76
SHANK2-203ENST00000409161 HIST1H2BCP62807 126 aa10.3□□□□□ -0.76
SHANK2-203ENST00000409161 HIST2H2BEQ16778 126 aa10.3□□□□□ -0.76
SHANK2-203ENST00000409161 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.3□□□□□ -0.76
SHANK2-203ENST00000409161 HIST1H2BHQ93079 126 aa10.3□□□□□ -0.76
SHANK2-203ENST00000409161 HIST1H2BNQ99877 126 aa10.3□□□□□ -0.76
SHANK2-203ENST00000409161 HIST1H2BMQ99879 126 aa10.3□□□□□ -0.76
SHANK2-203ENST00000409161 ARHGAP32A7KAX9 2087 aa10.3□□□□□ -0.76
SHANK2-203ENST00000409161 NAPSAO96009 420 aa10.3□□□□□ -0.76
SHANK2-203ENST00000409161 RHOGP84095 191 aa10.3□□□□□ -0.76
SHANK2-203ENST00000409161 TMEM92Q6UXU6 159 aa10.3□□□□□ -0.76
SHANK2-203ENST00000409161 ZAR1Q86SH2 424 aa10.3□□□□□ -0.76
SHANK2-203ENST00000409161 IGKV1D-16P01601 117 aa10.3□□□□□ -0.76
SHANK2-203ENST00000409161 ESDP10768 282 aa10.3□□□□□ -0.76
SHANK2-203ENST00000409161 ERG28Q9UKR5 140 aa10.3□□□□□ -0.76
SHANK2-203ENST00000409161 LINC01565O15544 149 aa10.29□□□□□ -0.76
SHANK2-203ENST00000409161 SEPSECSQ9HD40 501 aaKnown RBP10.29□□□□□ -0.76
SHANK2-203ENST00000409161 CELA2BP08218 269 aaPredicted RBP10.29□□□□□ -0.76
SHANK2-203ENST00000409161 LAGE3Q14657 143 aa10.29□□□□□ -0.76
SHANK2-203ENST00000409161 NCOR1P1Q9H4R4 102 aa10.29□□□□□ -0.76
SHANK2-203ENST00000409161 A0A0J9YW62 118 aa10.29□□□□□ -0.76
SHANK2-203ENST00000409161 FABP5P3A8MUU1 101 aa10.29□□□□□ -0.76
SHANK2-203ENST00000409161 SSBP2P81877 361 aaPredicted RBP10.29□□□□□ -0.76
SHANK2-203ENST00000409161 FAM19A2Q8N3H0 131 aa10.29□□□□□ -0.76
SHANK2-203ENST00000409161 SPEM2Q0P670 501 aa10.29□□□□□ -0.76
SHANK2-203ENST00000409161 C9JCJ5 164 aa10.29□□□□□ -0.76
SHANK2-203ENST00000409161 SPINT1O43278 529 aa10.29□□□□□ -0.76
SHANK2-203ENST00000409161 VKORC1Q9BQB6 163 aa10.29□□□□□ -0.76
SHANK2-203ENST00000409161 CHTOPQ9Y3Y2 248 aaKnown RBP10.29□□□□□ -0.76
SHANK2-203ENST00000409161 TRAV12-3A0A0B4J271 114 aa10.29□□□□□ -0.76
SHANK2-203ENST00000409161 PVRIGQ6DKI7 326 aa10.29□□□□□ -0.76
SHANK2-203ENST00000409161 SLC25A48Q6ZT89 311 aaKnown RBP10.28□□□□□ -0.76
SHANK2-203ENST00000409161 TNFSF13O75888 250 aa10.28□□□□□ -0.76
SHANK2-203ENST00000409161 MOSP00540 346 aa10.28□□□□□ -0.76
SHANK2-203ENST00000409161 PEMTQ9UBM1 199 aa10.28□□□□□ -0.76
SHANK2-203ENST00000409161 COX6B1P14854 86 aa10.28□□□□□ -0.76
SHANK2-203ENST00000409161 DMRTA2Q96SC8 542 aa10.28□□□□□ -0.76
SHANK2-203ENST00000409161 C21orf62Q9NYP8 219 aa10.28□□□□□ -0.76
SHANK2-203ENST00000409161 PF4P02776 101 aa10.28□□□□□ -0.76
SHANK2-203ENST00000409161 TPRX1Q8N7U7 411 aa10.28□□□□□ -0.76
SHANK2-203ENST00000409161 ARPC1AQ92747 370 aa10.28□□□□□ -0.76
SHANK2-203ENST00000409161 TOMM7Q9P0U1 55 aa10.28□□□□□ -0.76
SHANK2-203ENST00000409161 SIP14410 1827 aa10.28□□□□□ -0.76
SHANK2-203ENST00000409161 TRGV3P03979 118 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms