RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 C15orf62A8K5M9 175 aa14.37□□□□□ -0.11
SMARCB1-204ENST00000407422 K7EMT4 169 aa14.37□□□□□ -0.11
SMARCB1-204ENST00000407422 TSPAN4O14817 238 aa14.37□□□□□ -0.11
SMARCB1-204ENST00000407422 NUPL2O15504 423 aaKnown RBP14.37□□□□□ -0.11
SMARCB1-204ENST00000407422 FCGR2BP31994 310 aaPredicted RBP14.37□□□□□ -0.11
SMARCB1-204ENST00000407422 ERHP84090 104 aaKnown RBP14.37□□□□□ -0.11
SMARCB1-204ENST00000407422 TRIM16LQ309B1 348 aa14.37□□□□□ -0.11
SMARCB1-204ENST00000407422 ZFAND1Q8TCF1 268 aa14.37□□□□□ -0.11
SMARCB1-204ENST00000407422 GGTLC1Q9BX51 225 aa14.37□□□□□ -0.11
SMARCB1-204ENST00000407422 A0A0G2JRQ6 117 aa14.36□□□□□ -0.11
SMARCB1-204ENST00000407422 ST8SIA3O43173 380 aa14.36□□□□□ -0.11
SMARCB1-204ENST00000407422 CCDC71LQ8N9Z2 235 aa14.36□□□□□ -0.11
SMARCB1-204ENST00000407422 LOC102724200A0A096LPH7 203 aaPredicted RBP14.35□□□□□ -0.11
SMARCB1-204ENST00000407422 IGHV3-49A0A0A0MS15 119 aa14.35□□□□□ -0.11
SMARCB1-204ENST00000407422 YIF1AO95070 293 aa14.35□□□□□ -0.11
SMARCB1-204ENST00000407422 CTSDP07339 412 aaPredicted RBP14.35□□□□□ -0.11
SMARCB1-204ENST00000407422 UCP1P25874 307 aa14.35□□□□□ -0.11
SMARCB1-204ENST00000407422 SSBP1Q04837 148 aaKnown RBP14.35□□□□□ -0.11
SMARCB1-204ENST00000407422 RELQ04864 619 aaPredicted RBP14.35□□□□□ -0.11
SMARCB1-204ENST00000407422 LAMTOR1Q6IAA8 161 aa14.35□□□□□ -0.11
SMARCB1-204ENST00000407422 DYNC2LI1Q8TCX1 351 aa14.35□□□□□ -0.11
SMARCB1-204ENST00000407422 SMIM4Q8WVI0 70 aa14.35□□□□□ -0.11
SMARCB1-204ENST00000407422 TXN2Q99757 166 aa14.35□□□□□ -0.11
SMARCB1-204ENST00000407422 NXF2Q9GZY0 626 aaKnown RBP14.35□□□□□ -0.11
SMARCB1-204ENST00000407422 SMPXQ9UHP9 88 aa14.35□□□□□ -0.11
SMARCB1-204ENST00000407422 IFNA17P01571 189 aa14.34□□□□□ -0.11
SMARCB1-204ENST00000407422 ETV6P41212 452 aa14.34□□□□□ -0.11
SMARCB1-204ENST00000407422 MRPS10P82664 201 aaKnown RBP14.34□□□□□ -0.11
SMARCB1-204ENST00000407422 SLC35G3Q8N808 338 aa14.34□□□□□ -0.11
SMARCB1-204ENST00000407422 RAB2BQ8WUD1 216 aa14.34□□□□□ -0.11
SMARCB1-204ENST00000407422 DIRAS2Q96HU8 199 aa14.34□□□□□ -0.11
SMARCB1-204ENST00000407422 RNF2Q99496 336 aa14.34□□□□□ -0.11
SMARCB1-204ENST00000407422 RTBDNQ9BSG5 229 aaPredicted RBP14.34□□□□□ -0.11
SMARCB1-204ENST00000407422 HYDINQ4G0P3 5121 aa14.34□□□□□ -0.11
SMARCB1-204ENST00000407422 GNG7O60262 68 aa14.33□□□□□ -0.11
SMARCB1-204ENST00000407422 SNCAP37840 140 aa14.33□□□□□ -0.11
SMARCB1-204ENST00000407422 IL18Q14116 193 aa14.33□□□□□ -0.11
SMARCB1-204ENST00000407422 MEF2DQ14814 521 aa14.33□□□□□ -0.11
SMARCB1-204ENST00000407422 ODF3L2Q3SX64 289 aa14.33□□□□□ -0.11
SMARCB1-204ENST00000407422 Q6ZRM9 215 aa14.33□□□□□ -0.11
SMARCB1-204ENST00000407422 OR10C1Q96KK4 312 aa14.33□□□□□ -0.11
SMARCB1-204ENST00000407422 OVOL2Q9BRP0 275 aa14.33□□□□□ -0.11
SMARCB1-204ENST00000407422 IGHV7-4-1A0A0J9YVY3 117 aa14.33□□□□□ -0.12
SMARCB1-204ENST00000407422 LCE6AA0A183 80 aa14.33□□□□□ -0.12
SMARCB1-204ENST00000407422 INS-IGF2F8WCM5 200 aa14.33□□□□□ -0.12
SMARCB1-204ENST00000407422 CHEK1O14757 476 aa14.33□□□□□ -0.12
SMARCB1-204ENST00000407422 ATG12O94817 140 aa14.33□□□□□ -0.12
SMARCB1-204ENST00000407422 OR5AC1P0C628 307 aa14.33□□□□□ -0.12
SMARCB1-204ENST00000407422 TMBIM6P55061 237 aa14.33□□□□□ -0.12
SMARCB1-204ENST00000407422 OR4C16Q8NGL9 310 aa14.33□□□□□ -0.12
SMARCB1-204ENST00000407422 LHFPL5Q8TAF8 219 aa14.33□□□□□ -0.12
SMARCB1-204ENST00000407422 RRNAD1Q96FB5 475 aaKnown RBP14.33□□□□□ -0.12
SMARCB1-204ENST00000407422 RHPN1-AS1Q9BWJ2 59 aa14.33□□□□□ -0.12
SMARCB1-204ENST00000407422 TMEM222Q9H0R3 208 aa14.33□□□□□ -0.12
SMARCB1-204ENST00000407422 CCDC59Q9P031 241 aaKnown RBP14.33□□□□□ -0.12
SMARCB1-204ENST00000407422 PLECQ15149 4684 aaKnown RBP14.32□□□□□ -0.12
SMARCB1-204ENST00000407422 IGHV3OR16-13A0A075B7E8 117 aa14.32□□□□□ -0.12
SMARCB1-204ENST00000407422 IGHV3-74A0A0B4J1X5 117 aa14.32□□□□□ -0.12
SMARCB1-204ENST00000407422 A6NHS1 94 aa14.32□□□□□ -0.12
SMARCB1-204ENST00000407422 RNASE2P10153 161 aaKnown RBP14.32□□□□□ -0.12
SMARCB1-204ENST00000407422 TMEM116Q8NCL8 245 aa14.32□□□□□ -0.12
SMARCB1-204ENST00000407422 GLYATL2Q8WU03 294 aa14.32□□□□□ -0.12
SMARCB1-204ENST00000407422 PDCD10Q9BUL8 212 aa14.32□□□□□ -0.12
SMARCB1-204ENST00000407422 CTDSPLO15194 276 aa14.31□□□□□ -0.12
SMARCB1-204ENST00000407422 CDS2O95674 445 aa14.31□□□□□ -0.12
SMARCB1-204ENST00000407422 HOXA1P49639 335 aaPredicted RBP14.31□□□□□ -0.12
SMARCB1-204ENST00000407422 PVRIGQ6DKI7 326 aa14.31□□□□□ -0.12
SMARCB1-204ENST00000407422 RNASE11Q8TAA1 199 aaKnown RBP14.31□□□□□ -0.12
SMARCB1-204ENST00000407422 C6orf62Q9GZU0 229 aaPredicted RBP14.31□□□□□ -0.12
SMARCB1-204ENST00000407422 NAA60Q9H7X0 242 aa14.31□□□□□ -0.12
SMARCB1-204ENST00000407422 C14orf166Q9Y224 244 aaKnown RBP14.31□□□□□ -0.12
SMARCB1-204ENST00000407422 TRAV14DV4A0A0A6YYC5 116 aa14.3□□□□□ -0.12
SMARCB1-204ENST00000407422 TEX13DA0A0J9YY54 714 aaPredicted RBP14.3□□□□□ -0.12
SMARCB1-204ENST00000407422 OR4C46A6NHA9 309 aa14.3□□□□□ -0.12
SMARCB1-204ENST00000407422 DISC1C4P0D8 188 aa14.3□□□□□ -0.12
SMARCB1-204ENST00000407422 B3GALNT1O75752 331 aa14.3□□□□□ -0.12
SMARCB1-204ENST00000407422 AKAIN1P0CW23 69 aa14.3□□□□□ -0.12
SMARCB1-204ENST00000407422 TOMM20LQ6UXN7 152 aa14.3□□□□□ -0.12
SMARCB1-204ENST00000407422 DUSP18Q8NEJ0 188 aa14.3□□□□□ -0.12
SMARCB1-204ENST00000407422 MRPL36Q9P0J6 103 aaKnown RBP14.3□□□□□ -0.12
SMARCB1-204ENST00000407422 IGKV3-7A0A075B6H7 116 aa14.3□□□□□ -0.12
SMARCB1-204ENST00000407422 NPBWR1P48145 328 aa14.3□□□□□ -0.12
SMARCB1-204ENST00000407422 MLANAQ16655 118 aa14.3□□□□□ -0.12
SMARCB1-204ENST00000407422 OR51S1Q8NGJ8 323 aa14.3□□□□□ -0.12
SMARCB1-204ENST00000407422 BCL7BQ9BQE9 202 aa14.3□□□□□ -0.12
SMARCB1-204ENST00000407422 SLIRPQ9GZT3 109 aaKnown RBP14.3□□□□□ -0.12
SMARCB1-204ENST00000407422 FNDC4Q9H6D8 234 aaPredicted RBP14.3□□□□□ -0.12
SMARCB1-204ENST00000407422 GPR132Q9UNW8 380 aa14.3□□□□□ -0.12
SMARCB1-204ENST00000407422 H3BMQ9 156 aa14.29□□□□□ -0.12
SMARCB1-204ENST00000407422 TFPI2P48307 235 aa14.29□□□□□ -0.12
SMARCB1-204ENST00000407422 SURF2Q15527 256 aaPredicted RBP14.29□□□□□ -0.12
SMARCB1-204ENST00000407422 APRG1Q8IVJ8 170 aa14.29□□□□□ -0.12
SMARCB1-204ENST00000407422 SELENOHQ8IZQ5 122 aaKnown RBP14.29□□□□□ -0.12
SMARCB1-204ENST00000407422 ENY2Q9NPA8 101 aa14.29□□□□□ -0.12
SMARCB1-204ENST00000407422 CRYM-AS1A6NIL9 109 aa14.28□□□□□ -0.12
SMARCB1-204ENST00000407422 TMEM50AO95807 157 aa14.28□□□□□ -0.12
SMARCB1-204ENST00000407422 APOHP02749 345 aaPredicted RBP14.28□□□□□ -0.12
SMARCB1-204ENST00000407422 RPL5P46777 297 aaKnown RBP14.28□□□□□ -0.12
SMARCB1-204ENST00000407422 SUB1P53999 127 aaKnown RBP eCLIP14.28□□□□□ -0.12
SMARCB1-204ENST00000407422 ZNF124Q15973 351 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms