RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 DBIP07108 87 aaKnown RBP2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 OR5G3P0C626 314 aa2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 GZMBP10144 247 aa2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 FGF6P10767 208 aa2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 AQP4P55087 323 aa2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 TAS2R20P59543 309 aa2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 SNRPD2P62316 118 aaKnown RBP2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 EBI3Q14213 229 aa2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 JOSD1Q15040 202 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 PDGFRLQ15198 375 aa2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 TMEM241Q24JQ0 296 aa2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 UBE2NLQ5JXB2 153 aa2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 FAM201AQ5SY85 155 aa2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 C6orf52Q5T4I8 152 aa2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 BCL2L15Q5TBC7 163 aa2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 ZNF773Q6PK81 442 aa2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 ZNF550Q7Z398 422 aa2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 SLC25A45Q8N413 288 aa2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 TMEM229BQ8NBD8 167 aa2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 MFSD8Q8NHS3 518 aa2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 MBD3L1Q8WWY6 194 aa2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 YPEL4Q96NS1 127 aa2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 TSSK6Q9BXA6 273 aa2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 ANKRD26Q9UPS8 1709 aa2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 MAGI3Q5TCQ9 1506 aa2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 DISP2A7MBM2 1401 aa2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 SYNJ1O43426 1573 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 REREQ9P2R6 1566 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 CEP164Q9UPV0 1460 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 IGHV2-26A0A0B4J1V2 119 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 TRAV26-2A0A0B4J265 109 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 TMEM269A0A1B0GVZ9 245 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 LY6LH3BQJ8 138 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 K7EPK0 472 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 MT-ND4LP03901 98 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 ATP5G1P05496 136 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 CTLA4P16410 223 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 CCL1P22362 96 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 GNG4P50150 75 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 ZNF83P51522 516 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 AKR1C2P52895 323 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 NDUFA6P56556 154 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 HOXC5Q00444 222 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 PSG9Q00887 426 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 DHRS2Q13268 280 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 EIF3IQ13347 325 aaKnown RBP2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 ENDOGQ14249 297 aaKnown RBP2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 ZNF141Q15928 474 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 KHDC3LQ587J8 217 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 IBA57Q5T440 356 aaKnown RBP2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 TIFABQ6ZNK6 161 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 LINC00299Q6ZSB3 139 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 CLEC20AQ6ZU45 233 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 OOSP2Q86WS3 158 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 OR11H6Q8NGC7 330 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 OR8B12Q8NGG6 310 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 OR5A2Q8NGI9 324 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 OR8D4Q8NGM9 314 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 PP6455Q8WZ26 134 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 BORCS7Q96B45 105 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 PLEKHB2Q96CS7 222 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 FXYD5Q96DB9 178 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 LINC01587Q99440 93 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 SPIN2AQ99865 258 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 SPIN2BQ9BPZ2 258 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 PRADC1Q9BSG0 188 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 THTPAQ9BU02 230 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 PBDC1Q9BVG4 233 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 ULBP3Q9BZM4 244 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 ZNF436Q9C0F3 470 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 TMEM133Q9H2Q1 129 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 LINC00574Q9H8X3 128 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 OR5AC2Q9NZP5 309 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 TAC3Q9UHF0 121 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 MCTS1Q9ULC4 181 aaKnown RBP2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 ZNF706Q9Y5V0 76 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 S4R3C0 116 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 TECPR2O15040 1411 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 PRG4Q92954 1404 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 PLXND1Q9Y4D7 1925 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 ECM29Q5VYK3 1845 aa2.91□□□□□ -1.94
HMGB1P13-201ENST00000406019 PLA2R1Q13018 1463 aa2.9□□□□□ -1.94
HMGB1P13-201ENST00000406019 ZC3H13Q5T200 1668 aaKnown RBP2.9□□□□□ -1.95
HMGB1P13-201ENST00000406019 IGKV2D-24A0A075B6R9 120 aa2.9□□□□□ -1.95
HMGB1P13-201ENST00000406019 PNMA8CA0A1B0GUJ8 204 aa2.9□□□□□ -1.95
HMGB1P13-201ENST00000406019 TMEM212A6NML5 194 aa2.9□□□□□ -1.95
HMGB1P13-201ENST00000406019 TMEM250H0YL14 139 aa2.9□□□□□ -1.95
HMGB1P13-201ENST00000406019 H7C1C5 153 aa2.9□□□□□ -1.95
HMGB1P13-201ENST00000406019 SOD3P08294 240 aa2.9□□□□□ -1.95
HMGB1P13-201ENST00000406019 LGALS1P09382 135 aaKnown RBP2.9□□□□□ -1.95
HMGB1P13-201ENST00000406019 ZNF14P17017 642 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P13-201ENST00000406019 CRHBPP24387 322 aa2.9□□□□□ -1.95
HMGB1P13-201ENST00000406019 TGFBR1P36897 503 aa2.9□□□□□ -1.95
HMGB1P13-201ENST00000406019 MARCKSL1P49006 195 aa2.9□□□□□ -1.95
HMGB1P13-201ENST00000406019 RBM11P57052 281 aaKnown RBP2.9□□□□□ -1.95
HMGB1P13-201ENST00000406019 LCN6P62502 163 aa2.9□□□□□ -1.95
HMGB1P13-201ENST00000406019 DEFA5Q01523 94 aa2.9□□□□□ -1.95
HMGB1P13-201ENST00000406019 PEA15Q15121 130 aa2.9□□□□□ -1.95
HMGB1P13-201ENST00000406019 ALKAL2Q6UX46 152 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms