RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 WDR83OSQ9Y284 106 aa13.39□□□□□ -0.27
COL4A3BP-204ENST00000405807 TRAV38-1A0A0B4J264 116 aa13.39□□□□□ -0.27
COL4A3BP-204ENST00000405807 FCN1O00602 326 aa13.39□□□□□ -0.27
COL4A3BP-204ENST00000405807 ERVK11-1P61568 191 aa13.39□□□□□ -0.27
COL4A3BP-204ENST00000405807 SPATA12Q7Z6I5 190 aa13.39□□□□□ -0.27
COL4A3BP-204ENST00000405807 OR10G8Q8NGN5 311 aa13.39□□□□□ -0.27
COL4A3BP-204ENST00000405807 SRSF8Q9BRL6 282 aaKnown RBP13.39□□□□□ -0.27
COL4A3BP-204ENST00000405807 RALYQ9UKM9 306 aaKnown RBP13.39□□□□□ -0.27
COL4A3BP-204ENST00000405807 USF1P22415 310 aaPredicted RBP13.38□□□□□ -0.27
COL4A3BP-204ENST00000405807 Q0VFX4 171 aa13.38□□□□□ -0.27
COL4A3BP-204ENST00000405807 EIF4EBP1Q13541 118 aaPredicted RBP13.38□□□□□ -0.27
COL4A3BP-204ENST00000405807 ZNF146Q15072 292 aa13.38□□□□□ -0.27
COL4A3BP-204ENST00000405807 C5orf47Q569G3 176 aa13.38□□□□□ -0.27
COL4A3BP-204ENST00000405807 SCCPDHQ8NBX0 429 aa13.38□□□□□ -0.27
COL4A3BP-204ENST00000405807 DAZAP1Q96EP5 407 aaKnown RBP13.38□□□□□ -0.27
COL4A3BP-204ENST00000405807 DOCK11Q5JSL3 2073 aa13.38□□□□□ -0.27
COL4A3BP-204ENST00000405807 TRAV9-1A0A075B6T8 112 aa13.38□□□□□ -0.27
COL4A3BP-204ENST00000405807 HELTA6NFD8 242 aa13.38□□□□□ -0.27
COL4A3BP-204ENST00000405807 C17orf98A8MV24 154 aa13.38□□□□□ -0.27
COL4A3BP-204ENST00000405807 RHOBP62745 196 aa13.38□□□□□ -0.27
COL4A3BP-204ENST00000405807 VPREB3Q9UKI3 123 aa13.38□□□□□ -0.27
COL4A3BP-204ENST00000405807 SAA2-SAA4A0A096LPE2 208 aa13.37□□□□□ -0.27
COL4A3BP-204ENST00000405807 OTX2P32243 289 aa13.37□□□□□ -0.27
COL4A3BP-204ENST00000405807 GNG4P50150 75 aa13.37□□□□□ -0.27
COL4A3BP-204ENST00000405807 EDDM3BP56851 147 aa13.37□□□□□ -0.27
COL4A3BP-204ENST00000405807 ZNF90Q03938 601 aa13.37□□□□□ -0.27
COL4A3BP-204ENST00000405807 GCSAMLQ5JQS6 135 aa13.37□□□□□ -0.27
COL4A3BP-204ENST00000405807 FA2HQ7L5A8 372 aa13.37□□□□□ -0.27
COL4A3BP-204ENST00000405807 Q8N7P7 452 aa13.37□□□□□ -0.27
COL4A3BP-204ENST00000405807 VSTM2AQ8TAG5 236 aa13.37□□□□□ -0.27
COL4A3BP-204ENST00000405807 COMMD5Q9GZQ3 224 aa13.37□□□□□ -0.27
COL4A3BP-204ENST00000405807 A0A0G2JLM5 398 aa13.37□□□□□ -0.27
COL4A3BP-204ENST00000405807 TGFAP01135 160 aa13.37□□□□□ -0.27
COL4A3BP-204ENST00000405807 CACNA1EQ15878 2313 aa13.37□□□□□ -0.27
COL4A3BP-204ENST00000405807 TMEM30CPA0ZSE6 113 aa13.36□□□□□ -0.27
COL4A3BP-204ENST00000405807 MPDU1O75352 247 aa13.36□□□□□ -0.27
COL4A3BP-204ENST00000405807 SPINK8P0C7L1 97 aa13.36□□□□□ -0.27
COL4A3BP-204ENST00000405807 BRWD1-AS2P59051 145 aa13.36□□□□□ -0.27
COL4A3BP-204ENST00000405807 SPINK9Q5DT21 86 aa13.36□□□□□ -0.27
COL4A3BP-204ENST00000405807 C15orf62A8K5M9 175 aa13.36□□□□□ -0.27
COL4A3BP-204ENST00000405807 NEURL1O76050 574 aa13.36□□□□□ -0.27
COL4A3BP-204ENST00000405807 SEC11AP67812 179 aa13.36□□□□□ -0.27
COL4A3BP-204ENST00000405807 SPATA46Q5T0L3 261 aa13.36□□□□□ -0.27
COL4A3BP-204ENST00000405807 LYSMD4Q5XG99 296 aa13.36□□□□□ -0.27
COL4A3BP-204ENST00000405807 PPP1R32Q7Z5V6 425 aa13.36□□□□□ -0.27
COL4A3BP-204ENST00000405807 FSCN3Q9NQT6 498 aa13.36□□□□□ -0.27
COL4A3BP-204ENST00000405807 ASPMQ8IZT6 3477 aa13.36□□□□□ -0.27
COL4A3BP-204ENST00000405807 FREM1Q5H8C1 2179 aa13.36□□□□□ -0.27
COL4A3BP-204ENST00000405807 TRBV20OR9-2A0A075B6H5 130 aa13.35□□□□□ -0.27
COL4A3BP-204ENST00000405807 HBZP02008 142 aa13.35□□□□□ -0.27
COL4A3BP-204ENST00000405807 UQCRFS1P47985 274 aa13.35□□□□□ -0.27
COL4A3BP-204ENST00000405807 WDR86Q86TI4 376 aa13.35□□□□□ -0.27
COL4A3BP-204ENST00000405807 OCC1Q8TAD7 63 aa13.35□□□□□ -0.27
COL4A3BP-204ENST00000405807 PPDPFQ9H3Y8 114 aa13.35□□□□□ -0.27
COL4A3BP-204ENST00000405807 C12orf77C9JDV5 145 aa13.35□□□□□ -0.27
COL4A3BP-204ENST00000405807 H3BRM9 83 aa13.35□□□□□ -0.27
COL4A3BP-204ENST00000405807 CXorf1O96002 111 aa13.35□□□□□ -0.27
COL4A3BP-204ENST00000405807 MT-CO3P00414 261 aa13.35□□□□□ -0.27
COL4A3BP-204ENST00000405807 CXCL12P48061 93 aa13.35□□□□□ -0.27
COL4A3BP-204ENST00000405807 TRIP6Q15654 476 aaKnown RBP13.35□□□□□ -0.27
COL4A3BP-204ENST00000405807 ADAMTSL5Q6ZMM2 481 aa13.35□□□□□ -0.27
COL4A3BP-204ENST00000405807 C1QTNF4Q9BXJ3 329 aa13.35□□□□□ -0.27
COL4A3BP-204ENST00000405807 IL36BQ9NZH7 164 aa13.35□□□□□ -0.27
COL4A3BP-204ENST00000405807 ARL2-SNX15V9GYD0 113 aa13.35□□□□□ -0.27
COL4A3BP-204ENST00000405807 OOEPA6NGQ2 149 aa13.35□□□□□ -0.27
COL4A3BP-204ENST00000405807 ISLRO14498 428 aa13.35□□□□□ -0.27
COL4A3BP-204ENST00000405807 CA1P00915 261 aaPredicted RBP13.35□□□□□ -0.27
COL4A3BP-204ENST00000405807 OPRK1P41145 380 aa13.35□□□□□ -0.27
COL4A3BP-204ENST00000405807 WDR31Q8NA23 367 aa13.35□□□□□ -0.27
COL4A3BP-204ENST00000405807 ARL14EPLP0DKL9 152 aa13.34□□□□□ -0.27
COL4A3BP-204ENST00000405807 SPINK14Q6IE38 97 aa13.34□□□□□ -0.27
COL4A3BP-204ENST00000405807 C8orf86Q6ZUL3 223 aa13.34□□□□□ -0.27
COL4A3BP-204ENST00000405807 GLMPQ8WWB7 406 aa13.34□□□□□ -0.27
COL4A3BP-204ENST00000405807 GPR183P32249 361 aa13.34□□□□□ -0.27
COL4A3BP-204ENST00000405807 IER3P46695 156 aa13.34□□□□□ -0.27
COL4A3BP-204ENST00000405807 PDLIM3Q53GG5 364 aaPredicted RBP13.34□□□□□ -0.27
COL4A3BP-204ENST00000405807 MBD6Q96DN6 1003 aa13.34□□□□□ -0.27
COL4A3BP-204ENST00000405807 SPAG8Q99932 426 aaPredicted RBP13.34□□□□□ -0.27
COL4A3BP-204ENST00000405807 SCO2A0A1W2PP80 73 aa13.33□□□□□ -0.28
COL4A3BP-204ENST00000405807 SNURFLB1AK76 121 aa13.33□□□□□ -0.28
COL4A3BP-204ENST00000405807 K7ESF4 209 aa13.33□□□□□ -0.28
COL4A3BP-204ENST00000405807 NKX2-8O15522 239 aa13.33□□□□□ -0.28
COL4A3BP-204ENST00000405807 DCAF12Q5T6F0 453 aa13.33□□□□□ -0.28
COL4A3BP-204ENST00000405807 FAM173AQ9BQD7 235 aa13.33□□□□□ -0.28
COL4A3BP-204ENST00000405807 ZNF576Q9H609 170 aa13.33□□□□□ -0.28
COL4A3BP-204ENST00000405807 NPIPB5A8MRT5 1133 aa13.33□□□□□ -0.28
COL4A3BP-204ENST00000405807 SCGB2A1O75556 95 aa13.33□□□□□ -0.28
COL4A3BP-204ENST00000405807 OR10J3Q5JRS4 329 aa13.33□□□□□ -0.28
COL4A3BP-204ENST00000405807 SLC35E4Q6ICL7 350 aa13.33□□□□□ -0.28
COL4A3BP-204ENST00000405807 STPG3Q8N7X2 389 aa13.33□□□□□ -0.28
COL4A3BP-204ENST00000405807 TSKUQ8WUA8 353 aa13.33□□□□□ -0.28
COL4A3BP-204ENST00000405807 HSD17B10Q99714 261 aaKnown RBP13.33□□□□□ -0.28
COL4A3BP-204ENST00000405807 VWC2LB2RUY7 222 aa13.32□□□□□ -0.28
COL4A3BP-204ENST00000405807 PSPNO60542 156 aa13.32□□□□□ -0.28
COL4A3BP-204ENST00000405807 HTR1DP28221 377 aa13.32□□□□□ -0.28
COL4A3BP-204ENST00000405807 NANOS1Q8WY41 292 aaKnown RBP13.32□□□□□ -0.28
COL4A3BP-204ENST00000405807 R4GN57 208 aa13.32□□□□□ -0.28
COL4A3BP-204ENST00000405807 ESPL1Q14674 2120 aa13.32□□□□□ -0.28
COL4A3BP-204ENST00000405807 DIDO1Q9BTC0 2240 aaKnown RBP13.32□□□□□ -0.28
COL4A3BP-204ENST00000405807 A0A1W2PPM0 123 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms