RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 UBE2L3P68036 154 aaKnown RBP3.55□□□□□ -1.84
SMC6-203ENST00000402989 PLGLAQ15195 96 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 MORN5Q5VZ52 161 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 LEMD1Q68G75 181 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 TMEM200BQ69YZ2 307 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 CFAP161Q6P656 301 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 OR8I2Q8N0Y5 310 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 TCTEX1D1Q8N7M0 179 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 NPIPB3Q92617 1050 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 FLYWCH2Q96CP2 140 aaKnown RBP3.55□□□□□ -1.84
SMC6-203ENST00000402989 RITA1Q96K30 269 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 SLC35E1Q96K37 410 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 HRNRQ86YZ3 2850 aaPredicted RBP3.55□□□□□ -1.84
SMC6-203ENST00000402989 ZNF729A6NN14 1252 aaPredicted RBP3.55□□□□□ -1.84
SMC6-203ENST00000402989 UPK2O00526 184 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 MT-CO2P00403 227 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 THBDP07204 575 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 LINC00869P0C866 280 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 STAG3L2P0CL84 134 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 STAG3L3P0CL85 134 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 TNXAQ16473 311 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 LRRC10Q5BKY1 277 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 CENPWQ5EE01 88 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 DDB2Q92466 427 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 C1orf159Q96HA4 380 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 ASCL2Q99929 193 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 SCNM1Q9BWG6 230 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 GAL3ST2Q9H3Q3 398 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 KCNIP2Q9NS61 270 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 TMEM106BQ9NUM4 274 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 PITPNC1Q9UKF7 332 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 PRNDQ9UKY0 176 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 COX7A2P2O60397 106 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 CEACAM4O75871 244 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 ADMP35318 185 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 GNG4P50150 75 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 RPL8P62917 257 aaKnown RBP3.55□□□□□ -1.84
SMC6-203ENST00000402989 GNG5P63218 68 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 S100A12P80511 92 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 ERHP84090 104 aaKnown RBP3.55□□□□□ -1.84
SMC6-203ENST00000402989 TGIF2LXQ8IUE1 241 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 OR5AU1Q8NGC0 362 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 OR1B1Q8NGR6 318 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 PARD6GQ9BYG4 376 aaPredicted RBP3.55□□□□□ -1.84
SMC6-203ENST00000402989 RAB9BQ9NP90 201 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 TMEM14BQ9NUH8 114 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 CTSZQ9UBR2 303 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 TIMM8BQ9Y5J9 83 aaPredicted RBP3.55□□□□□ -1.84
SMC6-203ENST00000402989 HIVEP3Q5T1R4 2406 aa3.55□□□□□ -1.84
SMC6-203ENST00000402989 CELSR1Q9NYQ6 3014 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 ELOA3CA0A087WX78 387 aaPredicted RBP3.54□□□□□ -1.84
SMC6-203ENST00000402989 K7EN84 100 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 FCN1O00602 326 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 NUPR1O60356 82 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 MPDU1O75352 247 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 FCN3O75636 299 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 IGHV2-70P01814 119 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 CEACAM8P31997 349 aaPredicted RBP3.54□□□□□ -1.84
SMC6-203ENST00000402989 MAS1LP35410 378 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 CNN1P51911 297 aaKnown RBP3.54□□□□□ -1.84
SMC6-203ENST00000402989 RANP62826 216 aaKnown RBP3.54□□□□□ -1.84
SMC6-203ENST00000402989 VWC2Q2TAL6 325 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 TMEM95Q3KNT9 176 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 SLC25A48Q6ZT89 311 aaKnown RBP3.54□□□□□ -1.84
SMC6-203ENST00000402989 ASCL5Q7RTU5 278 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 CENPVQ7Z7K6 275 aaPredicted RBP3.54□□□□□ -1.84
SMC6-203ENST00000402989 BAGE3Q86Y29 109 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 BAGE2Q86Y30 109 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 TMEM183AQ8IXX5 376 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 ZNF439Q8NDP4 499 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 OR1L6Q8NGR2 347 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 ANAPC16Q96DE5 110 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 ADTRPQ96IZ2 230 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 TUBG2Q9NRH3 451 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 ONECUT1Q9UBC0 465 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 FOXA2Q9Y261 457 aaPredicted RBP3.54□□□□□ -1.84
SMC6-203ENST00000402989 A0A087X0M5 115 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 TMEM238LA0A1B0GVL6 79 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 A0A1B0GX30 115 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 HELTA6NFD8 242 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 SNURFLB1AK76 121 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 F2Z2F3 143 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 TSTD3H0UI37 97 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 CGB3P0DN86 165 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 CGB7P0DN87 165 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 PRCDQ00LT1 54 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 MAJINQ3KP22 176 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 KRTCAP3Q53RY4 240 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 TEX38Q6PEX7 206 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 SPACA3Q8IXA5 215 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 OR1L8Q8NGR8 309 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 SAMD10Q9BYL1 202 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 ZNF430Q9H8G1 570 aaPredicted RBP3.54□□□□□ -1.84
SMC6-203ENST00000402989 MRPL36Q9P0J6 103 aaKnown RBP3.54□□□□□ -1.84
SMC6-203ENST00000402989 HILPDAQ9Y5L2 63 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 LINC00312Q9Y6C7 94 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.54□□□□□ -1.84
SMC6-203ENST00000402989 PRSS46E5RG02 174 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 E7EQL1 145 aa3.54□□□□□ -1.84
SMC6-203ENST00000402989 H0YJW9 148 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms