RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 MIEN1Q9BRT3 115 aa6.32□□□□□ -1.4
HDAC9-201ENST00000401921 IL19Q9UHD0 177 aa6.32□□□□□ -1.4
HDAC9-201ENST00000401921 DMXL1Q9Y485 3027 aa6.32□□□□□ -1.4
HDAC9-201ENST00000401921 PPIAL4EA0A075B759 164 aa6.32□□□□□ -1.4
HDAC9-201ENST00000401921 GRIFINA4D1Z8 144 aa6.32□□□□□ -1.4
HDAC9-201ENST00000401921 PPIAL4DF5H284 164 aa6.32□□□□□ -1.4
HDAC9-201ENST00000401921 PLAUP00749 431 aa6.32□□□□□ -1.4
HDAC9-201ENST00000401921 REG1AP05451 166 aa6.32□□□□□ -1.4
HDAC9-201ENST00000401921 PPIAL4FP0DN26 164 aa6.32□□□□□ -1.4
HDAC9-201ENST00000401921 CNN1P51911 297 aaKnown RBP6.32□□□□□ -1.4
HDAC9-201ENST00000401921 PLGLAQ15195 96 aa6.32□□□□□ -1.4
HDAC9-201ENST00000401921 EFNB3Q15768 340 aa6.32□□□□□ -1.4
HDAC9-201ENST00000401921 LRRC10Q5BKY1 277 aa6.32□□□□□ -1.4
HDAC9-201ENST00000401921 PRR27Q6MZM9 219 aa6.32□□□□□ -1.4
HDAC9-201ENST00000401921 C22orf34Q6ZV56 151 aa6.32□□□□□ -1.4
HDAC9-201ENST00000401921 LINC01551Q86U37 167 aa6.32□□□□□ -1.4
HDAC9-201ENST00000401921 GBGT1Q8N5D6 347 aa6.32□□□□□ -1.4
HDAC9-201ENST00000401921 OCC1Q8TAD7 63 aa6.32□□□□□ -1.4
HDAC9-201ENST00000401921 TNFRSF14Q92956 283 aa6.32□□□□□ -1.4
HDAC9-201ENST00000401921 FLYWCH2Q96CP2 140 aaKnown RBP6.32□□□□□ -1.4
HDAC9-201ENST00000401921 SFRP2Q96HF1 295 aa6.32□□□□□ -1.4
HDAC9-201ENST00000401921 CSTL1Q9H114 145 aa6.32□□□□□ -1.4
HDAC9-201ENST00000401921 PPIAL4AQ9Y536 164 aa6.32□□□□□ -1.4
HDAC9-201ENST00000401921 CUL9Q8IWT3 2517 aa6.32□□□□□ -1.4
HDAC9-201ENST00000401921 DYSFO75923 2080 aa6.32□□□□□ -1.4
HDAC9-201ENST00000401921 TRGV8A0A0C4DH27 118 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 HELTA6NFD8 242 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 K7EP13 123 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 NPPCP23582 126 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 IL3RAP26951 378 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 GNG4P50150 75 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 GUSBP1Q15486 140 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 C17orf58Q2M2W7 97 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 ZNF114Q8NC26 417 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 MS4A10Q96PG2 267 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 IMMP2LQ96T52 175 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 SFXN3Q9BWM7 321 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 ZNF430Q9H8G1 570 aaPredicted RBP6.31□□□□□ -1.4
HDAC9-201ENST00000401921 SLC45A2Q9UMX9 530 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 F2RL2O00254 374 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 FCN1O00602 326 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 RBFOX2O43251 390 aaKnown RBP eCLIP6.31□□□□□ -1.4
HDAC9-201ENST00000401921 COX7A2P2O60397 106 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 VENTXO95231 258 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 PPBPP02775 128 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 P0C879 139 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 VDAC2P45880 294 aaPredicted RBP6.31□□□□□ -1.4
HDAC9-201ENST00000401921 IER3P46695 156 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 TAS2R45P59539 299 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 BSPH1Q075Z2 132 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 UBE2V1Q13404 147 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 FXYD3Q14802 87 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 IGFL2Q6UWQ7 119 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 C1orf229Q6ZS94 237 aaPredicted RBP6.31□□□□□ -1.4
HDAC9-201ENST00000401921 NHLRC2Q8NBF2 726 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 ZNF714Q96N38 554 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 FAM103A1Q9BTL3 118 aaKnown RBP6.31□□□□□ -1.4
HDAC9-201ENST00000401921 MRPL20Q9BYC9 149 aaKnown RBP6.31□□□□□ -1.4
HDAC9-201ENST00000401921 NAV3Q8IVL0 2385 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 STAG3L2P0CL84 134 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 STAG3L3P0CL85 134 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 SAA1P0DJI8 122 aaPredicted RBP6.31□□□□□ -1.4
HDAC9-201ENST00000401921 ORM2P19652 201 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 CBLN1P23435 193 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 SRP14P37108 136 aaKnown RBP6.31□□□□□ -1.4
HDAC9-201ENST00000401921 RANP62826 216 aaKnown RBP6.31□□□□□ -1.4
HDAC9-201ENST00000401921 TMEM183BQ1AE95 376 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 C10orf55Q5SWW7 151 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 HCP5Q6MZN7 132 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 PQLC2Q6ZP29 291 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 CENPVQ7Z7K6 275 aaPredicted RBP6.31□□□□□ -1.4
HDAC9-201ENST00000401921 DOLPP1Q86YN1 238 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 OR9G1Q8NH87 305 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 GAFA1Q96PS6 74 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 TECRQ9NZ01 308 aaKnown RBP6.31□□□□□ -1.4
HDAC9-201ENST00000401921 ATRXP46100 2492 aa6.31□□□□□ -1.4
HDAC9-201ENST00000401921 PTPRQQ9UMZ3 2332 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 A0A1B0GUS0 222 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 HAX1O00165 279 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 SLC25A17O43808 307 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 UBE2L3P68036 154 aaKnown RBP6.3□□□□□ -1.4
HDAC9-201ENST00000401921 PRSS8Q16651 343 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 KRTCAP3Q53RY4 240 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 LDLRAD2Q5SZI1 272 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 Q6ZS92 163 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 OR1L8Q8NGR8 309 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 OR2T6Q8NHC8 308 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 FAM57AQ8TBR7 257 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 BLNKQ8WV28 456 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 SGK494Q96LW2 274 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 VAMP8Q9BV40 100 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 NAT8BQ9UHF3 227 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 YTHDF2Q9Y5A9 579 aaKnown RBP6.3□□□□□ -1.4
HDAC9-201ENST00000401921 TOX4O94842 621 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 COX7A1P24310 79 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 RPL8P62917 257 aaKnown RBP6.3□□□□□ -1.4
HDAC9-201ENST00000401921 EIF4EBP1Q13541 118 aaPredicted RBP6.3□□□□□ -1.4
HDAC9-201ENST00000401921 MMDQ15546 238 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 KIAA1644Q3SXP7 199 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 LHFPL4Q7Z7J7 247 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms