RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 MUC21A0A0G2JKD1 596 aa15.15■□□□□ 0.02
COL18A1-204ENST00000400337 MUC21A0A140T8X8 626 aa15.15■□□□□ 0.02
COL18A1-204ENST00000400337 C5orf63A6NC05 138 aa15.15■□□□□ 0.02
COL18A1-204ENST00000400337 C9JCJ5 164 aa15.15■□□□□ 0.02
COL18A1-204ENST00000400337 ID3Q02535 119 aa15.15■□□□□ 0.02
COL18A1-204ENST00000400337 TBR1Q16650 682 aa15.15■□□□□ 0.02
COL18A1-204ENST00000400337 MUC21Q5SSG8 566 aa15.15■□□□□ 0.02
COL18A1-204ENST00000400337 OR4D5Q8NGN0 318 aa15.15■□□□□ 0.02
COL18A1-204ENST00000400337 GAGE10A6NGK3 116 aa15.15■□□□□ 0.02
COL18A1-204ENST00000400337 DNLZQ5SXM8 178 aa15.15■□□□□ 0.02
COL18A1-204ENST00000400337 PLSCR4Q9NRQ2 329 aa15.15■□□□□ 0.02
COL18A1-204ENST00000400337 IGHV3-11P01762 117 aa15.14■□□□□ 0.02
COL18A1-204ENST00000400337 ATRAIDQ6UW56 229 aa15.14■□□□□ 0.02
COL18A1-204ENST00000400337 IMMP2LQ96T52 175 aa15.14■□□□□ 0.02
COL18A1-204ENST00000400337 RLFQ13129 1914 aa15.14■□□□□ 0.01
COL18A1-204ENST00000400337 TMEM183AQ8IXX5 376 aa15.14■□□□□ 0.01
COL18A1-204ENST00000400337 M0R381 172 aa15.14■□□□□ 0.01
COL18A1-204ENST00000400337 IL18BPO95998 194 aa15.14■□□□□ 0.01
COL18A1-204ENST00000400337 OR9G9P0C7N8 305 aa15.14■□□□□ 0.01
COL18A1-204ENST00000400337 SDF2L1Q9HCN8 221 aa15.14■□□□□ 0.01
COL18A1-204ENST00000400337 LOC107984156A0A0G2JMH3 177 aa15.14■□□□□ 0.01
COL18A1-204ENST00000400337 FAM181BA6NEQ2 426 aa15.14■□□□□ 0.01
COL18A1-204ENST00000400337 TIMP3P35625 211 aa15.14■□□□□ 0.01
COL18A1-204ENST00000400337 CD69Q07108 199 aa15.14■□□□□ 0.01
COL18A1-204ENST00000400337 ARL17AQ8IVW1 177 aa15.14■□□□□ 0.01
COL18A1-204ENST00000400337 VWA8A3KMH1 1905 aa15.14■□□□□ 0.01
COL18A1-204ENST00000400337 C7orf71A4D174 169 aa15.13■□□□□ 0.01
COL18A1-204ENST00000400337 SELLP14151 372 aa15.13■□□□□ 0.01
COL18A1-204ENST00000400337 KIR2DL4Q99706 377 aa15.13■□□□□ 0.01
COL18A1-204ENST00000400337 PF4P02776 101 aa15.13■□□□□ 0.01
COL18A1-204ENST00000400337 FABP2P12104 132 aa15.13■□□□□ 0.01
COL18A1-204ENST00000400337 Q9H3A6 140 aa15.13■□□□□ 0.01
COL18A1-204ENST00000400337 PNRC2Q9NPJ4 139 aaKnown RBP15.13■□□□□ 0.01
COL18A1-204ENST00000400337 K7ERU9 68 aa15.13■□□□□ 0.01
COL18A1-204ENST00000400337 THBDP07204 575 aa15.13■□□□□ 0.01
COL18A1-204ENST00000400337 HIST1H4GQ99525 98 aa15.13■□□□□ 0.01
COL18A1-204ENST00000400337 BMPERQ8N8U9 685 aa15.13■□□□□ 0.01
COL18A1-204ENST00000400337 DMRT1Q9Y5R6 373 aa15.13■□□□□ 0.01
COL18A1-204ENST00000400337 THSD7BQ9C0I4 1608 aa15.12■□□□□ 0.01
COL18A1-204ENST00000400337 CEACAM4O75871 244 aa15.12■□□□□ 0.01
COL18A1-204ENST00000400337 SRRM5B3KS81 715 aa15.12■□□□□ 0.01
COL18A1-204ENST00000400337 SIP14410 1827 aa15.12■□□□□ 0.01
COL18A1-204ENST00000400337 F8VVB4 439 aa15.12■□□□□ 0.01
COL18A1-204ENST00000400337 F8VWA3 439 aa15.12■□□□□ 0.01
COL18A1-204ENST00000400337 SRSF3P84103 164 aaKnown RBP15.12■□□□□ 0.01
COL18A1-204ENST00000400337 ARTNQ5T4W7 220 aa15.12■□□□□ 0.01
COL18A1-204ENST00000400337 FMC1Q96HJ9 113 aa15.11■□□□□ 0.01
COL18A1-204ENST00000400337 TMEM70Q9BUB7 260 aa15.11■□□□□ 0.01
COL18A1-204ENST00000400337 F11RQ9Y624 299 aaKnown RBP15.11■□□□□ 0.01
COL18A1-204ENST00000400337 LDLRAD4O15165 306 aa15.11■□□□□ 0.01
COL18A1-204ENST00000400337 PRSS8Q16651 343 aa15.11■□□□□ 0.01
COL18A1-204ENST00000400337 PSPNO60542 156 aa15.11■□□□□ 0.01
COL18A1-204ENST00000400337 PRSS2P07478 247 aa15.11■□□□□ 0.01
COL18A1-204ENST00000400337 TMEM136Q6ZRR5 245 aa15.11■□□□□ 0.01
COL18A1-204ENST00000400337 ARL6IP6Q8N6S5 226 aa15.11■□□□□ 0.01
COL18A1-204ENST00000400337 LEMD1Q68G75 181 aa15.1■□□□□ 0.01
COL18A1-204ENST00000400337 RNF144BQ7Z419 303 aa15.1■□□□□ 0.01
COL18A1-204ENST00000400337 LHFPL1Q86WI0 220 aa15.1■□□□□ 0.01
COL18A1-204ENST00000400337 KCNS1Q96KK3 526 aa15.1■□□□□ 0.01
COL18A1-204ENST00000400337 WFDC1Q9HC57 220 aa15.1■□□□□ 0.01
COL18A1-204ENST00000400337 SBF1O95248 1867 aa15.1■□□□□ 0.01
COL18A1-204ENST00000400337 A0A1B0GUT8 65 aa15.1■□□□□ 0.01
COL18A1-204ENST00000400337 RPP21Q9H633 154 aaKnown RBP15.1■□□□□ 0.01
COL18A1-204ENST00000400337 RPL23P62829 140 aaKnown RBP15.1■□□□□ 0.01
COL18A1-204ENST00000400337 COL4A6Q14031 1691 aa15.1■□□□□ 0.01
COL18A1-204ENST00000400337 SRSF6Q13247 344 aaKnown RBP15.1■□□□□ 0.01
COL18A1-204ENST00000400337 MDS2Q8NDY4 140 aa15.1■□□□□ 0.01
COL18A1-204ENST00000400337 PRELID3AQ96N28 172 aa15.1■□□□□ 0.01
COL18A1-204ENST00000400337 TIMM23O14925 209 aa15.1■□□□□ 0.01
COL18A1-204ENST00000400337 COLCA1Q6ZS62 124 aa15.1■□□□□ 0.01
COL18A1-204ENST00000400337 LRTM2Q8N967 370 aa15.1■□□□□ 0.01
COL18A1-204ENST00000400337 C1QTNF9BB2RNN3 333 aa15.09■□□□□ 0.01
COL18A1-204ENST00000400337 COX6CP09669 75 aa15.09■□□□□ 0.01
COL18A1-204ENST00000400337 LGALS3P17931 250 aaKnown RBP15.09■□□□□ 0.01
COL18A1-204ENST00000400337 ASIPP42127 132 aa15.09■□□□□ 0.01
COL18A1-204ENST00000400337 GNG5P63218 68 aa15.09■□□□□ 0.01
COL18A1-204ENST00000400337 PRCDQ00LT1 54 aa15.09■□□□□ 0.01
COL18A1-204ENST00000400337 COL6A6A6NMZ7 2263 aa15.09■□□□□ 0.01
COL18A1-204ENST00000400337 IGKV3OR2-268A0A0C4DH90 116 aa15.09■□□□□ 0.01
COL18A1-204ENST00000400337 C18orf15Q96N68 181 aa15.09■□□□□ 0.01
COL18A1-204ENST00000400337 TAS2R60P59551 318 aa15.09■□□□□ 0.01
COL18A1-204ENST00000400337 A0A087WWC5 75 aa15.08■□□□□ 0.01
COL18A1-204ENST00000400337 DPRXA6NFQ7 191 aa15.08■□□□□ 0.01
COL18A1-204ENST00000400337 SUPT4H1P63272 117 aaKnown RBP15.08■□□□□ 0.01
COL18A1-204ENST00000400337 ADIPOQQ15848 244 aa15.08■□□□□ 0.01
COL18A1-204ENST00000400337 GCSAMLQ5JQS6 135 aa15.08■□□□□ 0
COL18A1-204ENST00000400337 B3GALT5-AS1P59052 145 aa15.08■□□□□ 0
COL18A1-204ENST00000400337 RPUSD1Q9UJJ7 312 aaKnown RBP15.08■□□□□ 0
COL18A1-204ENST00000400337 SLC25A15Q9Y619 301 aa15.08■□□□□ 0
COL18A1-204ENST00000400337 PYYP10082 97 aa15.08■□□□□ 0
COL18A1-204ENST00000400337 RNASE7Q9H1E1 156 aaKnown RBP15.08■□□□□ 0
COL18A1-204ENST00000400337 LILRA1O75019 489 aa15.07■□□□□ 0
COL18A1-204ENST00000400337 C21orf62-AS1Q17RA5 79 aa15.07■□□□□ 0
COL18A1-204ENST00000400337 ITLN2Q8WWU7 325 aaPredicted RBP15.07■□□□□ 0
COL18A1-204ENST00000400337 NBASA2RRP1 2371 aa15.07■□□□□ 0
COL18A1-204ENST00000400337 CCL20P78556 96 aa15.07■□□□□ 0
COL18A1-204ENST00000400337 SRSF7Q16629 238 aaKnown RBP eCLIP15.07■□□□□ 05e-7■■■■□ 25.7
COL18A1-204ENST00000400337 ZNF672Q499Z4 452 aaPredicted RBP15.07■□□□□ 0
COL18A1-204ENST00000400337 CIARTQ8N365 385 aaPredicted RBP15.07■□□□□ 0
COL18A1-204ENST00000400337 OR10W1Q8NGF6 305 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms