RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 DSCR9P59020 149 aa9.32□□□□□ -0.92
SKA3-203ENST00000400018 KRTAP1-1Q07627 177 aa9.32□□□□□ -0.92
SKA3-203ENST00000400018 PSG5Q15238 335 aa9.32□□□□□ -0.92
SKA3-203ENST00000400018 RPL7L1Q6DKI1 246 aaKnown RBP9.32□□□□□ -0.92
SKA3-203ENST00000400018 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.32□□□□□ -0.92
SKA3-203ENST00000400018 POMT1Q9Y6A1 747 aa9.32□□□□□ -0.92
SKA3-203ENST00000400018 TEX50A0A1B0GTY4 177 aa9.32□□□□□ -0.92
SKA3-203ENST00000400018 A8MWP6 167 aa9.32□□□□□ -0.92
SKA3-203ENST00000400018 RPS10P46783 165 aaKnown RBP9.32□□□□□ -0.92
SKA3-203ENST00000400018 SRPXP78539 464 aa9.32□□□□□ -0.92
SKA3-203ENST00000400018 MAJINQ3KP22 176 aa9.32□□□□□ -0.92
SKA3-203ENST00000400018 IL34Q6ZMJ4 242 aa9.32□□□□□ -0.92
SKA3-203ENST00000400018 PIFOQ8TCI5 191 aa9.32□□□□□ -0.92
SKA3-203ENST00000400018 ZNF48Q96MX3 618 aaPredicted RBP9.32□□□□□ -0.92
SKA3-203ENST00000400018 HSPB9Q9BQS6 159 aa9.32□□□□□ -0.92
SKA3-203ENST00000400018 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.32□□□□□ -0.92
SKA3-203ENST00000400018 PSENENQ9NZ42 101 aa9.32□□□□□ -0.92
SKA3-203ENST00000400018 TCF19Q9Y242 345 aa9.32□□□□□ -0.92
SKA3-203ENST00000400018 A0A1B0GU03 582 aa9.31□□□□□ -0.92
SKA3-203ENST00000400018 FBXO24O75426 580 aa9.31□□□□□ -0.92
SKA3-203ENST00000400018 CA2P00918 260 aa9.31□□□□□ -0.92
SKA3-203ENST00000400018 TMEM11P17152 192 aa9.31□□□□□ -0.92
SKA3-203ENST00000400018 RUNX1Q01196 453 aa9.31□□□□□ -0.92
SKA3-203ENST00000400018 SRSF4Q08170 494 aaKnown RBP9.31□□□□□ -0.92
SKA3-203ENST00000400018 ABHD5Q8WTS1 349 aa9.31□□□□□ -0.92
SKA3-203ENST00000400018 FBXL17Q9UF56 701 aa9.31□□□□□ -0.92
SKA3-203ENST00000400018 KBTBD11O94819 623 aa9.31□□□□□ -0.92
SKA3-203ENST00000400018 RBP4P02753 201 aa9.31□□□□□ -0.92
SKA3-203ENST00000400018 BLCAPP62952 87 aa9.31□□□□□ -0.92
SKA3-203ENST00000400018 VAMP2P63027 116 aa9.31□□□□□ -0.92
SKA3-203ENST00000400018 KHDC3LQ587J8 217 aa9.31□□□□□ -0.92
SKA3-203ENST00000400018 LCNL1Q6ZST4 164 aa9.31□□□□□ -0.92
SKA3-203ENST00000400018 LRRC75A-AS1Q8N1F1 130 aa9.31□□□□□ -0.92
SKA3-203ENST00000400018 KIR3DL3Q8N743 410 aa9.31□□□□□ -0.92
SKA3-203ENST00000400018 INO80EQ8NBZ0 244 aaPredicted RBP9.31□□□□□ -0.92
SKA3-203ENST00000400018 LSM10Q969L4 123 aaKnown RBP9.31□□□□□ -0.92
SKA3-203ENST00000400018 SH3BGRL3Q9H299 93 aa9.31□□□□□ -0.92
SKA3-203ENST00000400018 HEYLQ9NQ87 328 aaPredicted RBP9.31□□□□□ -0.92
SKA3-203ENST00000400018 YAE1D1Q9NRH1 226 aa9.31□□□□□ -0.92
SKA3-203ENST00000400018 C15orf61A6NNL5 157 aa9.3□□□□□ -0.92
SKA3-203ENST00000400018 UPK2O00526 184 aa9.3□□□□□ -0.92
SKA3-203ENST00000400018 IL6RP08887 468 aaPredicted RBP9.3□□□□□ -0.92
SKA3-203ENST00000400018 FAM157CP0CG43 387 aa9.3□□□□□ -0.92
SKA3-203ENST00000400018 FABP4P15090 132 aa9.3□□□□□ -0.92
SKA3-203ENST00000400018 DYNLT3P51808 116 aa9.3□□□□□ -0.92
SKA3-203ENST00000400018 EWSR1Q01844 656 aaKnown RBP eCLIP9.3□□□□□ -0.92
SKA3-203ENST00000400018 WT1-ASQ06250 92 aa9.3□□□□□ -0.92
SKA3-203ENST00000400018 TMEM177Q53S58 311 aa9.3□□□□□ -0.92
SKA3-203ENST00000400018 OR2C3Q8N628 320 aa9.3□□□□□ -0.92
SKA3-203ENST00000400018 TMEM252Q8N6L7 170 aa9.3□□□□□ -0.92
SKA3-203ENST00000400018 HSD17B11Q8NBQ5 300 aa9.3□□□□□ -0.92
SKA3-203ENST00000400018 PINX1Q96BK5 328 aaKnown RBP9.3□□□□□ -0.92
SKA3-203ENST00000400018 MBD6Q96DN6 1003 aa9.3□□□□□ -0.92
SKA3-203ENST00000400018 TMEM208Q9BTX3 173 aa9.3□□□□□ -0.92
SKA3-203ENST00000400018 NDUFAF3Q9BU61 184 aa9.3□□□□□ -0.92
SKA3-203ENST00000400018 C11orf1Q9H5F2 150 aa9.3□□□□□ -0.92
SKA3-203ENST00000400018 SIGLEC9Q9Y336 463 aa9.3□□□□□ -0.92
SKA3-203ENST00000400018 A0A1B0GV50 99 aa9.3□□□□□ -0.92
SKA3-203ENST00000400018 NUDT19A8MXV4 375 aa9.3□□□□□ -0.92
SKA3-203ENST00000400018 HRASP01112 189 aa9.3□□□□□ -0.92
SKA3-203ENST00000400018 CYCSP99999 105 aaKnown RBP9.3□□□□□ -0.92
SKA3-203ENST00000400018 C1orf122Q6ZSJ8 110 aa9.3□□□□□ -0.92
SKA3-203ENST00000400018 PDPNQ86YL7 162 aa9.3□□□□□ -0.92
SKA3-203ENST00000400018 OR5C1Q8NGR4 320 aa9.3□□□□□ -0.92
SKA3-203ENST00000400018 CD300LFQ8TDQ1 290 aa9.3□□□□□ -0.92
SKA3-203ENST00000400018 IL22RA2Q969J5 263 aa9.3□□□□□ -0.92
SKA3-203ENST00000400018 POLR3KQ9Y2Y1 108 aaPredicted RBP9.3□□□□□ -0.92
SKA3-203ENST00000400018 AMMECR1Q9Y4X0 333 aaPredicted RBP9.3□□□□□ -0.92
SKA3-203ENST00000400018 WSB1Q9Y6I7 421 aa9.3□□□□□ -0.92
SKA3-203ENST00000400018 DLEU1O43261 78 aa9.29□□□□□ -0.92
SKA3-203ENST00000400018 RPL8P62917 257 aaKnown RBP9.29□□□□□ -0.92
SKA3-203ENST00000400018 BAP18Q8IXM2 172 aa9.29□□□□□ -0.92
SKA3-203ENST00000400018 RAB24Q969Q5 203 aa9.29□□□□□ -0.92
SKA3-203ENST00000400018 MALSU1Q96EH3 234 aa9.29□□□□□ -0.92
SKA3-203ENST00000400018 ADTRPQ96IZ2 230 aa9.29□□□□□ -0.92
SKA3-203ENST00000400018 SNHG12Q9BXW3 62 aa9.29□□□□□ -0.92
SKA3-203ENST00000400018 HSPB7Q9UBY9 170 aa9.29□□□□□ -0.92
SKA3-203ENST00000400018 G3V318 75 aa9.29□□□□□ -0.92
SKA3-203ENST00000400018 CNIH1O95406 144 aa9.29□□□□□ -0.92
SKA3-203ENST00000400018 MOSP00540 346 aa9.29□□□□□ -0.92
SKA3-203ENST00000400018 IGHV3-23P01764 117 aa9.29□□□□□ -0.92
SKA3-203ENST00000400018 TPT1P13693 172 aaKnown RBP9.29□□□□□ -0.92
SKA3-203ENST00000400018 CEACAM3P40198 252 aa9.29□□□□□ -0.92
SKA3-203ENST00000400018 SULT1A1P50225 295 aa9.29□□□□□ -0.92
SKA3-203ENST00000400018 PPP1R27Q86WC6 154 aa9.29□□□□□ -0.92
SKA3-203ENST00000400018 C8orf31Q8N9H6 132 aa9.29□□□□□ -0.92
SKA3-203ENST00000400018 SSMEM1Q8WWF3 244 aa9.29□□□□□ -0.92
SKA3-203ENST00000400018 NOL4LQ96MY1 436 aaPredicted RBP9.29□□□□□ -0.92
SKA3-203ENST00000400018 TUBA4BQ9H853 241 aa9.29□□□□□ -0.92
SKA3-203ENST00000400018 RBFOX2O43251 390 aaKnown RBP eCLIP9.28□□□□□ -0.92
SKA3-203ENST00000400018 OR13C7P0DN81 318 aa9.28□□□□□ -0.92
SKA3-203ENST00000400018 SAPCD1Q5SSQ6 148 aa9.28□□□□□ -0.92
SKA3-203ENST00000400018 DMRTA1Q5VZB9 504 aa9.28□□□□□ -0.92
SKA3-203ENST00000400018 ETFRF1Q6IPR1 90 aa9.28□□□□□ -0.92
SKA3-203ENST00000400018 C10orf99Q6UWK7 81 aa9.28□□□□□ -0.92
SKA3-203ENST00000400018 ZNF664Q8N3J9 261 aa9.28□□□□□ -0.92
SKA3-203ENST00000400018 OR5T1Q8NG75 326 aa9.28□□□□□ -0.92
SKA3-203ENST00000400018 SPIN2AQ99865 258 aa9.28□□□□□ -0.92
SKA3-203ENST00000400018 SPIN2BQ9BPZ2 258 aa9.28□□□□□ -0.92
SKA3-203ENST00000400018 COMMD5Q9GZQ3 224 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms