RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 RPL8P62917 257 aaKnown RBP11.44□□□□□ -0.58
APOB-202ENST00000399256 PMCHL1Q16048 86 aa11.44□□□□□ -0.58
APOB-202ENST00000399256 PRSS33Q8NF86 280 aa11.44□□□□□ -0.58
APOB-202ENST00000399256 DDB2Q92466 427 aa11.44□□□□□ -0.58
APOB-202ENST00000399256 ST6GALNAC6Q969X2 333 aa11.44□□□□□ -0.58
APOB-202ENST00000399256 TMEM14BQ9NUH8 114 aa11.44□□□□□ -0.58
APOB-202ENST00000399256 CLCF1Q9UBD9 225 aa11.44□□□□□ -0.58
APOB-202ENST00000399256 ARL2-SNX15V9GYD0 113 aa11.44□□□□□ -0.58
APOB-202ENST00000399256 TRAV5A0A0B4J249 113 aa11.44□□□□□ -0.58
APOB-202ENST00000399256 TOMM40O96008 361 aa11.44□□□□□ -0.58
APOB-202ENST00000399256 CEACAM8P31997 349 aaPredicted RBP11.44□□□□□ -0.58
APOB-202ENST00000399256 KIR3DL3Q8N743 410 aa11.44□□□□□ -0.58
APOB-202ENST00000399256 ZNRF1Q8ND25 227 aa11.44□□□□□ -0.58
APOB-202ENST00000399256 CORO2AQ92828 525 aa11.44□□□□□ -0.58
APOB-202ENST00000399256 ALKBH7Q9BT30 221 aaPredicted RBP11.44□□□□□ -0.58
APOB-202ENST00000399256 MRPL27Q9P0M9 148 aaKnown RBP11.44□□□□□ -0.58
APOB-202ENST00000399256 FOXA2Q9Y261 457 aaPredicted RBP11.44□□□□□ -0.58
APOB-202ENST00000399256 OR51B2Q9Y5P1 312 aa11.44□□□□□ -0.58
APOB-202ENST00000399256 IGKV1D-17A0A075B6S4 117 aa11.44□□□□□ -0.58
APOB-202ENST00000399256 LOC105371242A0A075B767 164 aa11.44□□□□□ -0.58
APOB-202ENST00000399256 TRAV9-2A0A087WT02 112 aa11.44□□□□□ -0.58
APOB-202ENST00000399256 SPATA12Q7Z6I5 190 aa11.44□□□□□ -0.58
APOB-202ENST00000399256 GAL3ST2Q9H3Q3 398 aa11.44□□□□□ -0.58
APOB-202ENST00000399256 MED13Q9UHV7 2174 aa11.43□□□□□ -0.58
APOB-202ENST00000399256 MORN5Q5VZ52 161 aa11.43□□□□□ -0.58
APOB-202ENST00000399256 OR9G1Q8NH87 305 aa11.43□□□□□ -0.58
APOB-202ENST00000399256 COL25A1Q9BXS0 654 aaPredicted RBP11.43□□□□□ -0.58
APOB-202ENST00000399256 OTOGLQ3ZCN5 2332 aa11.43□□□□□ -0.58
APOB-202ENST00000399256 PRRC2CQ9Y520 2896 aaKnown RBP11.43□□□□□ -0.58
APOB-202ENST00000399256 A0A1W2PN81 502 aa11.43□□□□□ -0.58
APOB-202ENST00000399256 SAA2P0DJI9 122 aaPredicted RBP11.43□□□□□ -0.58
APOB-202ENST00000399256 KIR2DS2P43631 304 aa11.43□□□□□ -0.58
APOB-202ENST00000399256 RNF151Q2KHN1 245 aa11.43□□□□□ -0.58
APOB-202ENST00000399256 RNFT1Q5M7Z0 435 aa11.43□□□□□ -0.58
APOB-202ENST00000399256 PRR27Q6MZM9 219 aa11.43□□□□□ -0.58
APOB-202ENST00000399256 CLEC5AQ9NY25 188 aa11.43□□□□□ -0.58
APOB-202ENST00000399256 J3QR06 171 aa11.42□□□□□ -0.58
APOB-202ENST00000399256 CAMPP49913 170 aa11.42□□□□□ -0.58
APOB-202ENST00000399256 TAS2R45P59539 299 aa11.42□□□□□ -0.58
APOB-202ENST00000399256 UBE2G1P62253 170 aa11.42□□□□□ -0.58
APOB-202ENST00000399256 FBLN7Q53RD9 439 aa11.42□□□□□ -0.58
APOB-202ENST00000399256 TNFRSF19Q9NS68 423 aa11.42□□□□□ -0.58
APOB-202ENST00000399256 TRGV5A0A0B4J1U4 118 aa11.42□□□□□ -0.58
APOB-202ENST00000399256 IGHV2OR16-5A0A0B4J2B6 119 aa11.42□□□□□ -0.58
APOB-202ENST00000399256 IGLC7A0M8Q6 106 aa11.42□□□□□ -0.58
APOB-202ENST00000399256 UBE2L3P68036 154 aaKnown RBP11.42□□□□□ -0.58
APOB-202ENST00000399256 NUP35Q8NFH5 326 aa11.42□□□□□ -0.58
APOB-202ENST00000399256 OR2Z1Q8NG97 314 aa11.42□□□□□ -0.58
APOB-202ENST00000399256 OR4F17Q8NGA8 305 aa11.42□□□□□ -0.58
APOB-202ENST00000399256 CT45A1Q5HYN5 189 aa11.42□□□□□ -0.58
APOB-202ENST00000399256 INO80CQ6PI98 192 aaPredicted RBP11.42□□□□□ -0.58
APOB-202ENST00000399256 OR4C5Q8NGB2 326 aa11.42□□□□□ -0.58
APOB-202ENST00000399256 OR8B3Q8NGG8 313 aa11.42□□□□□ -0.58
APOB-202ENST00000399256 OR5B3Q8NH48 314 aa11.42□□□□□ -0.58
APOB-202ENST00000399256 CT45A3Q8NHU0 189 aa11.42□□□□□ -0.58
APOB-202ENST00000399256 OR8B2Q96RD0 313 aa11.42□□□□□ -0.58
APOB-202ENST00000399256 CALYQ9NYX4 217 aa11.42□□□□□ -0.58
APOB-202ENST00000399256 KLF13Q9Y2Y9 288 aaPredicted RBP11.42□□□□□ -0.58
APOB-202ENST00000399256 IGHV1-69-2A0A0G2JMI3 117 aa11.41□□□□□ -0.58
APOB-202ENST00000399256 A0A1W2PRE2 83 aa11.41□□□□□ -0.58
APOB-202ENST00000399256 SH2D7A6NKC9 451 aaPredicted RBP11.41□□□□□ -0.58
APOB-202ENST00000399256 C9orf172C9J069 976 aa11.41□□□□□ -0.58
APOB-202ENST00000399256 KLRC4-KLRK1H3BQV0 150 aa11.41□□□□□ -0.58
APOB-202ENST00000399256 C8orf88P0DMB2 117 aa11.41□□□□□ -0.58
APOB-202ENST00000399256 TNFSF4P23510 183 aa11.41□□□□□ -0.58
APOB-202ENST00000399256 CNEP1R1Q8N9A8 125 aa11.41□□□□□ -0.58
APOB-202ENST00000399256 COMMD5Q9GZQ3 224 aa11.41□□□□□ -0.58
APOB-202ENST00000399256 H0YJW9 148 aa11.41□□□□□ -0.58
APOB-202ENST00000399256 TBR1Q16650 682 aa11.41□□□□□ -0.58
APOB-202ENST00000399256 SNRNP40Q96DI7 357 aaKnown RBP11.41□□□□□ -0.58
APOB-202ENST00000399256 TRIB1Q96RU8 372 aa11.41□□□□□ -0.58
APOB-202ENST00000399256 SLC25A33Q9BSK2 321 aa11.41□□□□□ -0.58
APOB-202ENST00000399256 C2orf70A6NJV1 201 aa11.4□□□□□ -0.58
APOB-202ENST00000399256 F2RL2O00254 374 aa11.4□□□□□ -0.58
APOB-202ENST00000399256 MGST3O14880 152 aa11.4□□□□□ -0.58
APOB-202ENST00000399256 PYYP10082 97 aa11.4□□□□□ -0.58
APOB-202ENST00000399256 K7EP13 123 aa11.4□□□□□ -0.58
APOB-202ENST00000399256 M0QZ24 198 aa11.4□□□□□ -0.58
APOB-202ENST00000399256 CORTO00230 105 aa11.4□□□□□ -0.58
APOB-202ENST00000399256 HOXC12P31275 282 aa11.4□□□□□ -0.58
APOB-202ENST00000399256 VAMP3Q15836 100 aa11.4□□□□□ -0.58
APOB-202ENST00000399256 MUC15Q8N387 334 aa11.4□□□□□ -0.58
APOB-202ENST00000399256 NUDT10Q8NFP7 164 aa11.4□□□□□ -0.58
APOB-202ENST00000399256 NUDT11Q96G61 164 aa11.4□□□□□ -0.58
APOB-202ENST00000399256 SLC25A2Q9BXI2 301 aa11.4□□□□□ -0.58
APOB-202ENST00000399256 SAP30LQ9HAJ7 183 aa11.4□□□□□ -0.58
APOB-202ENST00000399256 CECR9P0C854 216 aa11.4□□□□□ -0.59
APOB-202ENST00000399256 SPRNQ5BIV9 151 aa11.4□□□□□ -0.59
APOB-202ENST00000399256 WIPF2Q8TF74 440 aaPredicted RBP11.4□□□□□ -0.59
APOB-202ENST00000399256 AMMECR1Q9Y4X0 333 aaPredicted RBP11.4□□□□□ -0.59
APOB-202ENST00000399256 IGHV2-70DA0A0C4DH43 119 aa11.39□□□□□ -0.59
APOB-202ENST00000399256 SAPCD1Q5SSQ6 148 aa11.39□□□□□ -0.59
APOB-202ENST00000399256 ETFRF1Q6IPR1 90 aa11.39□□□□□ -0.59
APOB-202ENST00000399256 MDS2Q8NDY4 140 aa11.39□□□□□ -0.59
APOB-202ENST00000399256 MBD6Q96DN6 1003 aa11.39□□□□□ -0.59
APOB-202ENST00000399256 SGK494Q96LW2 274 aa11.39□□□□□ -0.59
APOB-202ENST00000399256 TNCP24821 2201 aa11.39□□□□□ -0.59
APOB-202ENST00000399256 FNDC10F2Z333 226 aa11.39□□□□□ -0.59
APOB-202ENST00000399256 CD24P25063 80 aa11.39□□□□□ -0.59
APOB-202ENST00000399256 CDKN1BP46527 198 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms