RNA–Protein interactions for RNA: ENST00000398146.3

RGPD2-201, Transcript of RANBP2-like and GRIP domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD2, Length 6,931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD2-201ENST00000398146 C15orf32Q32M92 178 aa9.41□□□□□ -0.9
RGPD2-201ENST00000398146 WDFY2Q96P53 400 aa9.41□□□□□ -0.9
RGPD2-201ENST00000398146 SSBP2P81877 361 aaPredicted RBP9.4□□□□□ -0.9
RGPD2-201ENST00000398146 ZNF876PQ49A33 203 aa9.4□□□□□ -0.9
RGPD2-201ENST00000398146 ZNF708P17019 499 aa9.4□□□□□ -0.9
RGPD2-201ENST00000398146 FMC1Q96HJ9 113 aa9.4□□□□□ -0.9
RGPD2-201ENST00000398146 C17orf98A8MV24 154 aa9.4□□□□□ -0.9
RGPD2-201ENST00000398146 CCL1P22362 96 aa9.4□□□□□ -0.9
RGPD2-201ENST00000398146 CD300LDQ6UXZ3 194 aa9.4□□□□□ -0.9
RGPD2-201ENST00000398146 PRCDQ00LT1 54 aa9.4□□□□□ -0.9
RGPD2-201ENST00000398146 UBE2V2Q15819 145 aa9.4□□□□□ -0.9
RGPD2-201ENST00000398146 CR1LQ2VPA4 569 aa9.4□□□□□ -0.9
RGPD2-201ENST00000398146 IGKV1OR2-108A0A075B7D4 117 aa9.4□□□□□ -0.91
RGPD2-201ENST00000398146 IGHV3-16A0A0C4DH30 117 aa9.4□□□□□ -0.91
RGPD2-201ENST00000398146 IGHV1-18A0A0C4DH31 117 aa9.4□□□□□ -0.91
RGPD2-201ENST00000398146 IGKV1-8A0A0C4DH67 115 aa9.4□□□□□ -0.91
RGPD2-201ENST00000398146 NGFRP08138 427 aa9.4□□□□□ -0.91
RGPD2-201ENST00000398146 TFF3Q07654 80 aa9.4□□□□□ -0.91
RGPD2-201ENST00000398146 ZNF600Q6ZNG1 722 aa9.4□□□□□ -0.91
RGPD2-201ENST00000398146 RNF125Q96EQ8 232 aa9.4□□□□□ -0.91
RGPD2-201ENST00000398146 MSRB2Q9Y3D2 182 aa9.4□□□□□ -0.91
RGPD2-201ENST00000398146 MLNRO43193 412 aa9.4□□□□□ -0.91
RGPD2-201ENST00000398146 STAG3L3P0CL85 134 aa9.4□□□□□ -0.91
RGPD2-201ENST00000398146 LBHQ53QV2 105 aaPredicted RBP9.4□□□□□ -0.91
RGPD2-201ENST00000398146 SLC50A1Q9BRV3 221 aa9.4□□□□□ -0.91
RGPD2-201ENST00000398146 ZNF257Q9Y2Q1 563 aa9.4□□□□□ -0.91
RGPD2-201ENST00000398146 A0A1W2PR77 199 aa9.39□□□□□ -0.91
RGPD2-201ENST00000398146 MBNL3Q9NUK0 354 aaKnown RBP9.39□□□□□ -0.91
RGPD2-201ENST00000398146 VWC2LB2RUY7 222 aa9.39□□□□□ -0.91
RGPD2-201ENST00000398146 CD59P13987 128 aa9.39□□□□□ -0.91
RGPD2-201ENST00000398146 PAX9P55771 341 aa9.39□□□□□ -0.91
RGPD2-201ENST00000398146 TMEM249Q2WGJ8 235 aa9.39□□□□□ -0.91
RGPD2-201ENST00000398146 TRAV25A0A0B4J276 109 aa9.39□□□□□ -0.91
RGPD2-201ENST00000398146 FABP5P3A8MUU1 101 aa9.39□□□□□ -0.91
RGPD2-201ENST00000398146 F8VVB4 439 aa9.39□□□□□ -0.91
RGPD2-201ENST00000398146 F8VWA3 439 aa9.39□□□□□ -0.91
RGPD2-201ENST00000398146 SNRNP200O75643 2136 aaKnown RBP9.39□□□□□ -0.91
RGPD2-201ENST00000398146 MT-ND6P03923 174 aa9.39□□□□□ -0.91
RGPD2-201ENST00000398146 SNHG12Q9BXW3 62 aa9.39□□□□□ -0.91
RGPD2-201ENST00000398146 MS4A6AQ9H2W1 248 aa9.39□□□□□ -0.91
RGPD2-201ENST00000398146 CHCHD2Q9Y6H1 151 aaPredicted RBP9.39□□□□□ -0.91
RGPD2-201ENST00000398146 IGKV2-40A0A087WW87 121 aaPredicted RBP9.39□□□□□ -0.91
RGPD2-201ENST00000398146 IGKV2D-40P01614 121 aaPredicted RBP9.39□□□□□ -0.91
RGPD2-201ENST00000398146 SAXO1Q8IYX7 474 aa9.39□□□□□ -0.91
RGPD2-201ENST00000398146 PRDM13Q9H4Q3 707 aa9.39□□□□□ -0.91
RGPD2-201ENST00000398146 AKAP11Q9UKA4 1901 aa9.39□□□□□ -0.91
RGPD2-201ENST00000398146 A0A0G2JNJ9 132 aa9.39□□□□□ -0.91
RGPD2-201ENST00000398146 GALP22466 123 aa9.39□□□□□ -0.91
RGPD2-201ENST00000398146 PRR30Q53SZ7 412 aaPredicted RBP9.39□□□□□ -0.91
RGPD2-201ENST00000398146 Q9UFV3 132 aa9.39□□□□□ -0.91
RGPD2-201ENST00000398146 SCN9AQ15858 1988 aa9.39□□□□□ -0.91
RGPD2-201ENST00000398146 CLPSL2Q6UWE3 100 aa9.38□□□□□ -0.91
RGPD2-201ENST00000398146 LTBP4Q8N2S1 1624 aa9.38□□□□□ -0.91
RGPD2-201ENST00000398146 TRAV8-2A0A0B4J237 113 aa9.38□□□□□ -0.91
RGPD2-201ENST00000398146 A0A1B0GWB2 263 aa9.38□□□□□ -0.91
RGPD2-201ENST00000398146 MIR17HGQ75NE6 70 aa9.38□□□□□ -0.91
RGPD2-201ENST00000398146 HIST1H2BAQ96A08 127 aa9.38□□□□□ -0.91
RGPD2-201ENST00000398146 RMI2Q96E14 147 aa9.38□□□□□ -0.91
RGPD2-201ENST00000398146 LINC00477Q96M19 166 aa9.38□□□□□ -0.91
RGPD2-201ENST00000398146 C19orf24Q9BVV8 132 aa9.38□□□□□ -0.91
RGPD2-201ENST00000398146 GLI3P10071 1580 aa9.38□□□□□ -0.91
RGPD2-201ENST00000398146 IGKV2D-24A0A075B6R9 120 aa9.38□□□□□ -0.91
RGPD2-201ENST00000398146 TEX48A0A1B0GUV7 120 aa9.38□□□□□ -0.91
RGPD2-201ENST00000398146 DEFB131AP59861 70 aa9.38□□□□□ -0.91
RGPD2-201ENST00000398146 SLC25A38Q96DW6 304 aa9.38□□□□□ -0.91
RGPD2-201ENST00000398146 MCRIP2Q9BUT9 160 aaKnown RBP9.38□□□□□ -0.91
RGPD2-201ENST00000398146 SRRM4A7MD48 611 aaKnown RBP9.38□□□□□ -0.91
RGPD2-201ENST00000398146 TGFBR3LH3BV60 316 aa9.38□□□□□ -0.91
RGPD2-201ENST00000398146 MAST2Q6P0Q8 1798 aa9.38□□□□□ -0.91
RGPD2-201ENST00000398146 SLC17A3O00476 420 aa9.38□□□□□ -0.91
RGPD2-201ENST00000398146 RAG2P55895 527 aa9.38□□□□□ -0.91
RGPD2-201ENST00000398146 FUT5Q11128 374 aa9.38□□□□□ -0.91
RGPD2-201ENST00000398146 RBMY1FQ15415 496 aaKnown RBP9.38□□□□□ -0.91
RGPD2-201ENST00000398146 CD300EQ496F6 205 aaPredicted RBP9.38□□□□□ -0.91
RGPD2-201ENST00000398146 AGAP20933 346 aa9.37□□□□□ -0.91
RGPD2-201ENST00000398146 PSMG3Q9BT73 122 aaPredicted RBP9.37□□□□□ -0.91
RGPD2-201ENST00000398146 CHTOPQ9Y3Y2 248 aaKnown RBP9.37□□□□□ -0.91
RGPD2-201ENST00000398146 GAGE12JA6NER3 117 aa9.37□□□□□ -0.91
RGPD2-201ENST00000398146 OVOL1O14753 267 aa9.37□□□□□ -0.91
RGPD2-201ENST00000398146 GAGE1Q13065 139 aa9.37□□□□□ -0.91
RGPD2-201ENST00000398146 GAGE4Q13068 117 aa9.37□□□□□ -0.91
RGPD2-201ENST00000398146 GAGE5Q13069 117 aa9.37□□□□□ -0.91
RGPD2-201ENST00000398146 GAGE13Q4V321 117 aa9.37□□□□□ -0.91
RGPD2-201ENST00000398146 SDHCQ99643 169 aaPredicted RBP9.37□□□□□ -0.91
RGPD2-201ENST00000398146 ASCL2Q99929 193 aa9.37□□□□□ -0.91
RGPD2-201ENST00000398146 RPP21Q9H633 154 aaKnown RBP9.37□□□□□ -0.91
RGPD2-201ENST00000398146 A0A1B0GUL6 1792 aa9.37□□□□□ -0.91
RGPD2-201ENST00000398146 DDX60LQ5H9U9 1706 aaKnown RBP9.37□□□□□ -0.91
RGPD2-201ENST00000398146 A0A1B0GUT8 65 aa9.37□□□□□ -0.91
RGPD2-201ENST00000398146 LINC01619G3V211 115 aa9.37□□□□□ -0.91
RGPD2-201ENST00000398146 MORN3Q6PF18 240 aaPredicted RBP9.37□□□□□ -0.91
RGPD2-201ENST00000398146 CYSLTR1Q9Y271 337 aa9.37□□□□□ -0.91
RGPD2-201ENST00000398146 H3BMM0 161 aa9.37□□□□□ -0.91
RGPD2-201ENST00000398146 IGHV1-46P01743 117 aa9.37□□□□□ -0.91
RGPD2-201ENST00000398146 GATAD1Q8WUU5 269 aa9.37□□□□□ -0.91
RGPD2-201ENST00000398146 UBE2WQ96B02 151 aa9.37□□□□□ -0.91
RGPD2-201ENST00000398146 IGHV2-26A0A0B4J1V2 119 aa9.36□□□□□ -0.91
RGPD2-201ENST00000398146 SCO2A0A1W2PP80 73 aa9.36□□□□□ -0.91
RGPD2-201ENST00000398146 FAM90A10PA6NDY2 464 aa9.36□□□□□ -0.91
RGPD2-201ENST00000398146 FAM90A18PA6NE21 464 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms