RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 TRBV6-6A0A0A6YYG2 114 aa9.23□□□□□ -0.93
HPS4-202ENST00000398145 GOSR1O95249 250 aa9.23□□□□□ -0.93
HPS4-202ENST00000398145 FCGR2BP31994 310 aaPredicted RBP9.23□□□□□ -0.93
HPS4-202ENST00000398145 MRPL52Q86TS9 123 aaKnown RBP9.23□□□□□ -0.93
HPS4-202ENST00000398145 OR4A5Q8NH83 315 aa9.23□□□□□ -0.93
HPS4-202ENST00000398145 ZNF414Q96IQ9 312 aa9.23□□□□□ -0.93
HPS4-202ENST00000398145 SSBP4Q9BWG4 385 aaPredicted RBP9.23□□□□□ -0.93
HPS4-202ENST00000398145 SEMA5BQ9P283 1151 aa9.23□□□□□ -0.93
HPS4-202ENST00000398145 KBTBD11-OT1A0A1B0GTJ5 212 aa9.23□□□□□ -0.93
HPS4-202ENST00000398145 C9JCJ5 164 aa9.23□□□□□ -0.93
HPS4-202ENST00000398145 APOHP02749 345 aaPredicted RBP9.23□□□□□ -0.93
HPS4-202ENST00000398145 LTBRP36941 435 aa9.23□□□□□ -0.93
HPS4-202ENST00000398145 LHX2P50458 406 aa9.23□□□□□ -0.93
HPS4-202ENST00000398145 TDGF1P3P51864 188 aa9.23□□□□□ -0.93
HPS4-202ENST00000398145 RBPMS2Q6ZRY4 209 aaKnown RBP9.23□□□□□ -0.93
HPS4-202ENST00000398145 ERASQ7Z444 233 aa9.23□□□□□ -0.93
HPS4-202ENST00000398145 OR52E5Q8NH55 327 aa9.23□□□□□ -0.93
HPS4-202ENST00000398145 RNF166Q96A37 237 aaPredicted RBP9.23□□□□□ -0.93
HPS4-202ENST00000398145 RIF1Q5UIP0 2472 aaKnown RBP9.23□□□□□ -0.93
HPS4-202ENST00000398145 CELA3BP08861 270 aa9.23□□□□□ -0.93
HPS4-202ENST00000398145 MORN2Q502X0 79 aa9.23□□□□□ -0.93
HPS4-202ENST00000398145 SAPCD1Q5SSQ6 148 aa9.23□□□□□ -0.93
HPS4-202ENST00000398145 PEAR1Q5VY43 1037 aaPredicted RBP9.23□□□□□ -0.93
HPS4-202ENST00000398145 OR9G1Q8NH87 305 aa9.23□□□□□ -0.93
HPS4-202ENST00000398145 FAM90A9PA6NNJ1 464 aa9.23□□□□□ -0.93
HPS4-202ENST00000398145 RPS20P60866 119 aaKnown RBP9.23□□□□□ -0.93
HPS4-202ENST00000398145 FOXL2NBQ6ZUU3 175 aa9.23□□□□□ -0.93
HPS4-202ENST00000398145 GGNQ86UU5 652 aa9.23□□□□□ -0.93
HPS4-202ENST00000398145 DEFB124Q8NES8 71 aa9.23□□□□□ -0.93
HPS4-202ENST00000398145 SNHG12Q9BXW3 62 aa9.23□□□□□ -0.93
HPS4-202ENST00000398145 ZNF407Q9C0G0 2248 aa9.22□□□□□ -0.93
HPS4-202ENST00000398145 IGKV3D-15A0A087WSY6 115 aa9.22□□□□□ -0.93
HPS4-202ENST00000398145 TMEM238LA0A1B0GVL6 79 aa9.22□□□□□ -0.93
HPS4-202ENST00000398145 A6NJY4 79 aa9.22□□□□□ -0.93
HPS4-202ENST00000398145 FOXG1P55316 489 aaPredicted RBP9.22□□□□□ -0.93
HPS4-202ENST00000398145 FOXF2Q12947 444 aa9.22□□□□□ -0.93
HPS4-202ENST00000398145 MYO7BQ6PIF6 2116 aa9.22□□□□□ -0.93
HPS4-202ENST00000398145 ZNF841Q6ZN19 808 aa9.22□□□□□ -0.93
HPS4-202ENST00000398145 PNKDQ8N490 385 aa9.22□□□□□ -0.93
HPS4-202ENST00000398145 CA1P00915 261 aaPredicted RBP9.22□□□□□ -0.93
HPS4-202ENST00000398145 GLRXP35754 106 aa9.22□□□□□ -0.93
HPS4-202ENST00000398145 HEATR1Q9H583 2144 aaKnown RBP9.22□□□□□ -0.93
HPS4-202ENST00000398145 LDLRAD2Q5SZI1 272 aa9.22□□□□□ -0.93
HPS4-202ENST00000398145 PLXNA2O75051 1894 aa9.22□□□□□ -0.93
HPS4-202ENST00000398145 NBASA2RRP1 2371 aa9.22□□□□□ -0.93
HPS4-202ENST00000398145 CREBBPQ92793 2442 aa9.21□□□□□ -0.93
HPS4-202ENST00000398145 C2orf83Q53S99 150 aa9.21□□□□□ -0.93
HPS4-202ENST00000398145 HIST1H4GQ99525 98 aa9.21□□□□□ -0.93
HPS4-202ENST00000398145 RAB1BQ9H0U4 201 aa9.21□□□□□ -0.93
HPS4-202ENST00000398145 PSPNO60542 156 aa9.21□□□□□ -0.93
HPS4-202ENST00000398145 GPR183P32249 361 aa9.21□□□□□ -0.93
HPS4-202ENST00000398145 PAX9P55771 341 aa9.21□□□□□ -0.93
HPS4-202ENST00000398145 WDR82Q6UXN9 313 aa9.21□□□□□ -0.93
HPS4-202ENST00000398145 LOC107984156A0A0G2JMH3 177 aa9.21□□□□□ -0.94
HPS4-202ENST00000398145 SMIM13P0DJ93 91 aa9.21□□□□□ -0.94
HPS4-202ENST00000398145 MBNL2Q5VZF2 373 aaKnown RBP9.21□□□□□ -0.94
HPS4-202ENST00000398145 FAM90A1Q86YD7 464 aa9.21□□□□□ -0.94
HPS4-202ENST00000398145 ARL17AQ8IVW1 177 aa9.21□□□□□ -0.94
HPS4-202ENST00000398145 LPAR2Q9HBW0 351 aa9.21□□□□□ -0.94
HPS4-202ENST00000398145 SEPSECSQ9HD40 501 aaKnown RBP9.21□□□□□ -0.94
HPS4-202ENST00000398145 UPK2O00526 184 aa9.21□□□□□ -0.94
HPS4-202ENST00000398145 GPX1P07203 203 aa9.21□□□□□ -0.94
HPS4-202ENST00000398145 UNQ5815/PRO19632Q6UWF5 114 aa9.21□□□□□ -0.94
HPS4-202ENST00000398145 BMPERQ8N8U9 685 aa9.21□□□□□ -0.94
HPS4-202ENST00000398145 ZNF502Q8TBZ5 544 aa9.21□□□□□ -0.94
HPS4-202ENST00000398145 C20orf144Q9BQM9 153 aa9.21□□□□□ -0.94
HPS4-202ENST00000398145 RNF115Q9Y4L5 304 aa9.21□□□□□ -0.94
HPS4-202ENST00000398145 J3KRW8 73 aa9.2□□□□□ -0.94
HPS4-202ENST00000398145 ETV2O00321 342 aaPredicted RBP9.2□□□□□ -0.94
HPS4-202ENST00000398145 IGHV1-2P23083 117 aa9.2□□□□□ -0.94
HPS4-202ENST00000398145 DLX1P56177 255 aa9.2□□□□□ -0.94
HPS4-202ENST00000398145 FAM201AQ5SY85 155 aa9.2□□□□□ -0.94
HPS4-202ENST00000398145 FMC1Q96HJ9 113 aa9.2□□□□□ -0.94
HPS4-202ENST00000398145 PRELID3AQ96N28 172 aa9.2□□□□□ -0.94
HPS4-202ENST00000398145 ST20Q9HBF5 79 aa9.2□□□□□ -0.94
HPS4-202ENST00000398145 POLR3KQ9Y2Y1 108 aaPredicted RBP9.2□□□□□ -0.94
HPS4-202ENST00000398145 LY96Q9Y6Y9 160 aa9.2□□□□□ -0.94
HPS4-202ENST00000398145 SAA2-SAA4A0A096LPE2 208 aa9.2□□□□□ -0.94
HPS4-202ENST00000398145 IGKV1-6A0A0C4DH72 117 aa9.2□□□□□ -0.94
HPS4-202ENST00000398145 C7orf71A4D174 169 aa9.2□□□□□ -0.94
HPS4-202ENST00000398145 H3BVH4 76 aa9.2□□□□□ -0.94
HPS4-202ENST00000398145 TM4SF5O14894 197 aa9.2□□□□□ -0.94
HPS4-202ENST00000398145 C3orf79P0CE67 100 aa9.2□□□□□ -0.94
HPS4-202ENST00000398145 SAA2P0DJI9 122 aaPredicted RBP9.2□□□□□ -0.94
HPS4-202ENST00000398145 CD69Q07108 199 aa9.2□□□□□ -0.94
HPS4-202ENST00000398145 TMEM78Q5T7P6 136 aa9.2□□□□□ -0.94
HPS4-202ENST00000398145 CCDC144NLQ6NUI1 221 aa9.2□□□□□ -0.94
HPS4-202ENST00000398145 NKX2-8O15522 239 aa9.2□□□□□ -0.94
HPS4-202ENST00000398145 C1orf162Q8NEQ5 155 aaPredicted RBP9.2□□□□□ -0.94
HPS4-202ENST00000398145 RALYQ9UKM9 306 aaKnown RBP9.2□□□□□ -0.94
HPS4-202ENST00000398145 NPIPB11E5RHQ5 1161 aa9.19□□□□□ -0.94
HPS4-202ENST00000398145 MGPP08493 103 aa9.19□□□□□ -0.94
HPS4-202ENST00000398145 PYYP10082 97 aa9.19□□□□□ -0.94
HPS4-202ENST00000398145 AREGP15514 252 aa9.19□□□□□ -0.94
HPS4-202ENST00000398145 CX3CL1P78423 397 aa9.19□□□□□ -0.94
HPS4-202ENST00000398145 ZNF585BQ52M93 769 aa9.19□□□□□ -0.94
HPS4-202ENST00000398145 Q6AWC8 147 aa9.19□□□□□ -0.94
HPS4-202ENST00000398145 C20orf204Q6ZNR8 217 aa9.19□□□□□ -0.94
HPS4-202ENST00000398145 ZNF788Q6ZQV5 615 aa9.19□□□□□ -0.94
HPS4-202ENST00000398145 TSKUQ8WUA8 353 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms